Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.1051 Acer truncatum HOM05D000125 ORTHO05D037915 9.1e-147 523.5 251 100.0
Atru.chr2.1050 Acer truncatum HOM05D000125 ORTHO05D037915 2.0e-16 90.5 109 45.0
Thecc.05G165600 Theobroma cacao HOM05D000125 ORTHO05D000120 6.8e-09 65.5 137 27.7
Thecc.06G009700 Theobroma cacao HOM05D000125 ORTHO05D009513 2.0e-08 63.9 138 29.0
Thecc.05G269200 Theobroma cacao HOM05D000125 ORTHO05D009513 2.6e-08 63.5 151 27.8
Gorai.011G242900 Gossypium raimondii HOM05D000125 ORTHO05D000120 4.4e-08 62.8 129 30.2
PGR147G0007 Punica granatum HOM05D000125 ORTHO05D000120 5.8e-08 62.4 194 27.8
QL04p029580 Quercus lobata HOM05D000125 ORTHO05D000120 5.8e-08 62.4 132 27.3
Atru.chr2.1023 Acer truncatum HOM05D000125 ORTHO05D009513 1.3e-07 61.2 146 30.1
QL04p029873 Quercus lobata HOM05D000125 ORTHO05D000120 2.2e-07 60.5 129 28.7
Duzib128G0801 Durio zibethinus HOM05D000125 ORTHO05D000120 2.9e-07 60.1 154 28.6
Thecc.05G282800 Theobroma cacao HOM05D000125 ORTHO05D009513 2.9e-07 60.1 82 40.2
Haze_19284 Corylus avellana HOM05D000125 ORTHO05D000120 3.7e-07 59.7 151 30.5
Thecc.05G184000 Theobroma cacao HOM05D000125 ORTHO05D000120 3.7e-07 59.7 127 26.8
Thecc.05G184400 Theobroma cacao HOM05D000125 ORTHO05D000120 3.7e-07 59.7 127 26.8
Thecc.05G268500 Theobroma cacao HOM05D000125 ORTHO05D009513 3.7e-07 59.7 142 26.1
Thecc.05G282500 Theobroma cacao HOM05D000125 ORTHO05D009513 3.7e-07 59.7 138 28.3
Thecc.05G282900 Theobroma cacao HOM05D000125 ORTHO05D009513 3.7e-07 59.7 151 29.1
Thecc.06G010000 Theobroma cacao HOM05D005284 ORTHO05D006609 3.7e-07 59.7 197 25.4
TWI56G1036 Tripterygium wilfordii HOM05D000125 ORTHO05D000120 3.7e-07 59.7 197 27.9
Duzib128G1705 Durio zibethinus HOM05D000125 ORTHO05D009513 4.9e-07 59.3 159 28.3
Duzib128G1648 Durio zibethinus HOM05D000125 ORTHO05D009513 6.4e-07 58.9 136 28.7
Thecc.06G010700 Theobroma cacao HOM05D000125 ORTHO05D009513 6.4e-07 58.9 138 29.0
Duzib084G0092 Durio zibethinus HOM05D000125 ORTHO05D000120 8.3e-07 58.5 142 33.1
Aa31LG4G12070 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.1e-06 58.2 88 37.5
CSS0016521 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000120 1.1e-06 58.2 258 21.7
Duzib128G0744 Durio zibethinus HOM05D000125 ORTHO05D000120 1.1e-06 58.2 181 26.0
Gohir.D02G033200 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.1e-06 58.2 132 25.8
Duzib128G0912 Durio zibethinus HOM05D000125 ORTHO05D009513 1.4e-06 57.8 139 30.9
Gorai.008G159100 Gossypium raimondii HOM05D000125 ORTHO05D009513 1.4e-06 57.8 118 33.1
BraA08t34570Z Brassica rapa HOM05D000125 ORTHO05D000120 1.9e-06 57.4 128 25.0
PGR004G0421 Punica granatum HOM05D000125 ORTHO05D000120 1.9e-06 57.4 127 33.1
PGR147G0002 Punica granatum HOM05D000125 ORTHO05D000120 1.9e-06 57.4 188 27.1
COL.COLO4_36158 Corchorus olitorius HOM05D000125 ORTHO05D000120 2.4e-06 57.0 127 27.6
Oeu002053.1 Olea europaea HOM05D000125 ORTHO05D000807 2.4e-06 57.0 139 25.9
THA.LOC104812211 Tarenaya hassleriana HOM05D000125 ORTHO05D009513 2.4e-06 57.0 133 25.6
Lj1A359T19 Lonicera japonica HOM05D000125 ORTHO05D000120 3.2e-06 56.6 147 29.9
Actinidia14981 Actinidia chinensis HOM05D000125 ORTHO05D000807 4.1e-06 56.2 147 27.2
A08p26190 Brassica napus HOM05D000125 ORTHO05D000120 4.1e-06 56.2 128 25.0
CsaV3_3G038730 Cucumis sativus L. HOM05D000125 ORTHO05D000807 4.1e-06 56.2 154 26.0
Duzib177G0793 Durio zibethinus HOM05D000125 ORTHO05D009513 4.1e-06 56.2 65 38.5
Gohir.D12G147850 Gossypium hirsutum HOM05D000125 ORTHO05D009513 4.1e-06 56.2 118 33.1
Hma1.2p1_1006F.1_g247080 Hydrangea macrophylla HOM05D000125 ORTHO05D000807 4.1e-06 56.2 145 26.2
Potri.019G020100 Populus trichocarpa HOM05D000125 ORTHO05D000120 4.1e-06 56.2 144 27.1
Gohir.A12G143100 Gossypium hirsutum HOM05D000125 ORTHO05D009513 5.4e-06 55.8 117 31.6
Gohir.D02G033700 Gossypium hirsutum HOM05D000125 ORTHO05D000120 5.4e-06 55.8 128 26.6
Nitab4.5_0000013g0350 Nicotiana tabacum HOM05D000125 ORTHO05D022976 5.4e-06 55.8 161 29.8
Thecc.05G184200 Theobroma cacao HOM05D000125 ORTHO05D000120 5.4e-06 55.8 133 27.8
Thecc.06G009100 Theobroma cacao HOM05D000125 ORTHO05D009513 5.4e-06 55.8 138 28.3
Haze_04180 Corylus avellana HOM05D000125 ORTHO05D000120 9.2e-06 55.1 68 41.2
Dinv39597 Davidia involucrata HOM05D000125 ORTHO05D000120 9.2e-06 55.1 139 31.7
PGR004G2309 Punica granatum HOM05D000125 ORTHO05D000120 9.2e-06 55.1 143 27.3
QL04p029833 Quercus lobata HOM05D000125 ORTHO05D000120 9.2e-06 55.1 138 27.5


User provided reference genes

Program Settings