Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.1044 Acer truncatum HOM05D003506 ORTHO05D004063 1.8e-105 386.0 197 100.0
Atru.chr2.1020 Acer truncatum HOM05D003506 ORTHO05D004063 1.1e-86 323.6 170 97.6
Atru.chr2.1027 Acer truncatum HOM05D003506 ORTHO05D004063 3.3e-83 312.0 170 94.7
Atru.chr2.1012 Acer truncatum HOM05D003506 ORTHO05D004063 1.0e-60 237.3 153 84.3
Atru.chr2.2779 Acer truncatum HOM05D003506 ORTHO05D004063 2.1e-21 106.7 106 57.5
CARHR176610 Cardamine hirsuta HOM05D003506 ORTHO05D004063 2.1e-21 106.7 144 47.9
Atru.chr2.2548 Acer truncatum HOM05D003506 ORTHO05D004063 2.3e-20 103.2 145 49.0
QL12p009886 Quercus lobata HOM05D003506 ORTHO05D004063 5.1e-20 102.1 174 38.5
QL12p010549 Quercus lobata HOM05D003506 ORTHO05D004063 5.1e-20 102.1 174 38.5
AL8G13340 Arabidopsis lyrata HOM05D003506 ORTHO05D004063 7.4e-19 98.2 150 45.3
FAN14G0755 Fragaria x ananassa HOM05D003506 ORTHO05D004063 7.4e-19 98.2 156 47.4
Duzib205G1851 Durio zibethinus HOM05D003506 ORTHO05D004063 6.3e-18 95.1 175 39.4
FvH4_6g22120 Fragaria vesca HOM05D003506 ORTHO05D004063 1.8e-17 93.6 156 46.2
Cc02_g12220 Coffea canephora HOM05D003506 ORTHO05D004063 2.4e-17 93.2 134 41.8
TWI60G1006 Tripterygium wilfordii HOM05D003506 ORTHO05D004063 5.3e-17 92.0 149 42.3
COL.COLO4_15511 Corchorus olitorius HOM05D003506 ORTHO05D004063 7.0e-17 91.7 147 38.8
RcHm_v2.0_Chr3g0479451 Rosa chinensis HOM05D003506 ORTHO05D004063 7.0e-17 91.7 138 47.1
Hma1.2p1_2475F.1_g322790 Hydrangea macrophylla HOM05D003506 ORTHO05D004063 9.1e-17 91.3 157 42.0
CiPaw.12G027400 Carya illinoinensis HOM05D003506 ORTHO05D004063 7.7e-16 88.2 177 35.0
Potri.003G101000 Populus trichocarpa HOM05D003506 ORTHO05D004063 7.7e-16 88.2 132 45.5
Atru.chr2.2525 Acer truncatum HOM05D003506 ORTHO05D004063 2.2e-15 86.7 91 56.0
Cc00_g30260 Coffea canephora HOM05D003506 ORTHO05D004063 2.2e-15 86.7 148 37.8
CSS0017703 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 1.5e-14 84.0 148 38.5
Haze_19428 Corylus avellana HOM05D003506 ORTHO05D004063 2.5e-14 83.2 142 38.0
Eucgr.E00383 Eucalyptus grandis HOM05D003506 ORTHO05D004063 3.2e-14 82.8 144 38.9
Carub.0008s0262 Capsella rubella HOM05D003506 ORTHO05D004063 4.2e-14 82.4 139 41.7
Cc00_g10090 Coffea canephora HOM05D003506 ORTHO05D004063 5.5e-14 82.0 150 37.3
CSS0044487 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 9.4e-14 81.3 146 39.0
THA.LOC104798470 Tarenaya hassleriana HOM05D002287 ORTHO05D004063 1.2e-13 80.9 143 36.4
BcaNung04016 Brassica carinata HOM05D003506 ORTHO05D004063 2.7e-13 79.7 171 33.3
CSS0002170 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 4.7e-13 79.0 146 36.3
Lj1A1215T59 Lonicera japonica HOM05D003506 ORTHO05D004063 8.0e-13 78.2 142 41.5
PGR042G2042 Punica granatum HOM05D003506 ORTHO05D004063 8.0e-13 78.2 167 34.7
Atru.chr2.432 Acer truncatum HOM05D039078 ORTHO05D004063 2.3e-12 76.6 131 41.2
Gohir.A08G152600 Gossypium hirsutum HOM05D003506 ORTHO05D004063 2.3e-12 76.6 156 34.6
QL12p010090 Quercus lobata HOM05D003506 ORTHO05D004063 3.0e-12 76.3 171 35.1
Rhsim03G0012900 Rhododendron simsii HOM05D003506 ORTHO05D004063 3.9e-12 75.9 163 31.9
Rhsim03G0013200 Rhododendron simsii HOM05D003506 ORTHO05D004063 3.9e-12 75.9 162 33.3
Thecc.03G312300 Theobroma cacao HOM05D003506 ORTHO05D004063 5.2e-12 75.5 187 37.4
DCAR_013527 Daucus carota HOM05D003506 ORTHO05D004063 8.8e-12 74.7 137 36.5
Rhsim03G0013500 Rhododendron simsii HOM05D003506 ORTHO05D004063 1.1e-11 74.3 163 31.9
Atru.chr2.439 Acer truncatum HOM05D039078 ORTHO05D015752 2.0e-11 73.6 105 41.9
AL7G35000 Arabidopsis lyrata HOM05D000432 ORTHO05D004063 3.3e-11 72.8 129 36.4
Rhsim03G0013700 Rhododendron simsii HOM05D003506 ORTHO05D004063 3.3e-11 72.8 219 28.8
RhsimUnG0207500 Rhododendron simsii HOM05D003506 ORTHO05D004063 3.3e-11 72.8 158 34.2
Actinidia20129 Actinidia chinensis HOM05D003506 ORTHO05D004063 4.4e-11 72.4 156 39.7
CiPaw.11G083500 Carya illinoinensis HOM05D003506 ORTHO05D004063 4.4e-11 72.4 159 35.2
Cc05_g09100 Coffea canephora HOM05D003506 ORTHO05D004063 4.4e-11 72.4 143 35.0
Dinv40460 Davidia involucrata HOM05D003506 ORTHO05D004063 4.4e-11 72.4 116 44.0
Actinidia11820 Actinidia chinensis HOM05D003506 ORTHO05D006958 5.7e-11 72.0 157 35.0
QL12p009920 Quercus lobata HOM05D003506 ORTHO05D004063 1.7e-10 70.5 94 43.6
Prupe.7G078000 Prunus persica HOM05D003506 ORTHO05D004063 2.2e-10 70.1 161 36.6
Aa31LG9G7510 Aethionema arabicum HOM05D003506 ORTHO05D004063 4.8e-10 68.9 139 36.0
Gorai.004G181200 Gossypium raimondii HOM05D003506 ORTHO05D004063 4.8e-10 68.9 162 35.2
Cc00_g21830 Coffea canephora HOM05D003506 ORTHO05D004063 6.3e-10 68.6 120 38.3
Gohir.D08G173500 Gossypium hirsutum HOM05D003506 ORTHO05D004063 6.3e-10 68.6 137 38.7
PGR044G0363 Punica granatum HOM05D003506 ORTHO05D004063 6.3e-10 68.6 176 31.8
Thhalv10000742m.g Eutrema salsugineum HOM05D003506 ORTHO05D004063 8.2e-10 68.2 116 34.5
BcaNung04011 Brassica carinata HOM05D003506 ORTHO05D004063 1.8e-09 67.0 189 31.2
CiPaw.12G027300 Carya illinoinensis HOM05D003506 ORTHO05D004063 1.8e-09 67.0 135 31.9
PGR042G2755 Punica granatum HOM05D003506 ORTHO05D004063 1.8e-09 67.0 164 34.1
Cpa.g.sc27.149 Carica papaya HOM05D003506 ORTHO05D004063 2.4e-09 66.6 140 37.1
BcaC09g51442 Brassica carinata HOM05D003506 ORTHO05D004063 4.1e-09 65.9 157 34.4
C01p13080 Brassica napus HOM05D003506 ORTHO05D004063 4.1e-09 65.9 157 34.4
BolC1t01282H Brassica oleracea HOM05D003506 ORTHO05D004063 4.1e-09 65.9 157 34.4
AT4G19050 Arabidopsis thaliana HOM05D003506 ORTHO05D004063 5.3e-09 65.5 152 33.6
Cpa.g.sc27.153 Carica papaya HOM05D003506 ORTHO05D004063 5.3e-09 65.5 131 34.4
COL.COLO4_16912 Corchorus olitorius HOM05D003506 ORTHO05D004063 5.3e-09 65.5 169 32.0
Cfa001536 Carpinus fangiana HOM05D003506 ORTHO05D004063 7.0e-09 65.1 186 31.2
Cpa.g.sc727.3 Carica papaya HOM05D003506 ORTHO05D004063 9.1e-09 64.7 151 34.4
Eucgr.D00770 Eucalyptus grandis HOM05D003506 ORTHO05D004063 9.1e-09 64.7 153 30.7
Haze_19427 Corylus avellana HOM05D003506 ORTHO05D004063 1.2e-08 64.3 145 35.2
A01p11060 Brassica napus HOM05D003506 ORTHO05D004063 3.5e-08 62.8 177 30.5
Carub.0007s2209 Capsella rubella HOM05D003506 ORTHO05D004063 4.5e-08 62.4 146 32.2
Cpa.g.sc27.152 Carica papaya HOM05D003506 ORTHO05D004063 4.5e-08 62.4 125 33.6
AL8G13190 Arabidopsis lyrata HOM05D003506 ORTHO05D004063 5.9e-08 62.0 128 35.2
Ciclev10033967m.g Citrus clementina HOM05D003506 ORTHO05D004063 5.9e-08 62.0 40 65.0
Cpa.g.sc27.147 Carica papaya HOM05D003506 ORTHO05D004063 1.0e-07 61.2 164 32.3
AT5G45510 Arabidopsis thaliana HOM05D003506 ORTHO05D004063 1.3e-07 60.8 128 35.2
BraA01t01053Z Brassica rapa HOM05D003506 ORTHO05D004063 1.3e-07 60.8 173 31.2
A02p29260 Brassica napus HOM05D003506 ORTHO05D004063 1.7e-07 60.5 174 29.9
BraA02t07955Z Brassica rapa HOM05D003506 ORTHO05D004063 1.7e-07 60.5 174 29.9
Eucgr.E03688 Eucalyptus grandis HOM05D003506 ORTHO05D004063 2.2e-07 60.1 116 33.6
QL12p010204 Quercus lobata HOM05D003506 ORTHO05D004063 2.9e-07 59.7 132 34.8
BcaC06g34429 Brassica carinata HOM05D003506 ORTHO05D004063 5.0e-07 58.9 171 31.0
C07p28600 Brassica napus HOM05D003506 ORTHO05D004063 5.0e-07 58.9 171 31.0
COL.COLO4_16868 Corchorus olitorius HOM05D003506 ORTHO05D004063 5.0e-07 58.9 123 32.5
THA.LOC109116396 Tarenaya hassleriana HOM05D003506 ORTHO05D004063 5.0e-07 58.9 112 36.6
THA.LOC104806185 Tarenaya hassleriana HOM05D003506 ORTHO05D004063 6.5e-07 58.5 112 37.5
Gohir.D12G206300 Gossypium hirsutum HOM05D003506 ORTHO05D004063 1.1e-06 57.8 156 30.8
SGA_v2.0_scaffold69G23083 Striga asiatica HOM05D003506 ORTHO05D004063 1.1e-06 57.8 142 33.8
Thecc.03G315800 Theobroma cacao HOM05D003506 ORTHO05D004063 1.1e-06 57.8 159 30.8
Thhalv10024259m.g Eutrema salsugineum HOM05D003506 ORTHO05D004063 1.5e-06 57.4 149 31.5
Gorai.008G221500 Gossypium raimondii HOM05D003506 ORTHO05D004063 1.5e-06 57.4 164 29.9
AL7G35050 Arabidopsis lyrata HOM05D003506 ORTHO05D004063 1.9e-06 57.0 169 29.6
DCAR_009112 Daucus carota HOM05D003506 ORTHO05D004063 1.9e-06 57.0 163 27.6
MD14G1055300 Malus domestica HOM05D003506 ORTHO05D004063 1.9e-06 57.0 127 36.2
CARHR176510 Cardamine hirsuta HOM05D003506 ORTHO05D004063 5.5e-06 55.5 177 30.5
Actinidia11835 Actinidia chinensis HOM05D003506 ORTHO05D004063 7.2e-06 55.1 54 46.3
Cpa.g.sc27.142 Carica papaya HOM05D003506 ORTHO05D004063 9.4e-06 54.7 156 31.4


User provided reference genes

Program Settings