Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.876 Acer truncatum HOM05D000194 ORTHO05D000069 7.1e-98 360.5 175 100.0
MD08G1077000 Malus domestica HOM05D000194 ORTHO05D000069 5.7e-55 218.0 167 67.1
COL.COLO4_28454 Corchorus olitorius HOM05D000194 ORTHO05D000069 3.7e-54 215.3 165 67.3
Prupe.1G418500 Prunus persica HOM05D000194 ORTHO05D000069 3.7e-54 215.3 166 65.7
FAN20G2303 Fragaria x ananassa HOM05D000194 ORTHO05D000069 9.1e-53 210.7 166 63.3
Haze_22377 Corylus avellana HOM05D000194 ORTHO05D000069 2.0e-52 209.5 169 63.3
FAN15G0744 Fragaria x ananassa HOM05D000194 ORTHO05D000069 2.0e-52 209.5 166 62.7
FvH4_2g32580 Fragaria vesca HOM05D000194 ORTHO05D000069 2.7e-52 209.1 166 62.7
FAN24G3130 Fragaria x ananassa HOM05D000194 ORTHO05D000069 2.7e-52 209.1 166 62.7
FAN27G2857 Fragaria x ananassa HOM05D000194 ORTHO05D000069 2.7e-52 209.1 166 62.7
RcHm_v2.0_Chr6g0310101 Rosa chinensis HOM05D000194 ORTHO05D000069 3.5e-52 208.8 166 62.7
MD15G1064500 Malus domestica HOM05D000194 ORTHO05D000069 6.5e-51 204.5 161 64.6
Duzib093G1145 Durio zibethinus HOM05D000194 ORTHO05D000069 4.2e-50 201.8 165 64.2
Duzib041G0407 Durio zibethinus HOM05D000194 ORTHO05D000069 9.4e-50 200.7 165 65.5
GSVIVG01009292001 Vitis vinifera HOM05D000194 ORTHO05D000069 9.4e-50 200.7 164 64.0
Ciclev10001249m.g Citrus clementina HOM05D000194 ORTHO05D000069 1.4e-48 196.8 169 65.7
Thecc.08G083800 Theobroma cacao HOM05D000194 ORTHO05D000069 1.2e-47 193.7 165 61.8
CiPaw.07G171500 Carya illinoinensis HOM05D000194 ORTHO05D000069 2.8e-46 189.1 169 58.6
CANSAT25G0613 Cannabis sativa HOM05D000194 ORTHO05D000069 6.3e-46 188.0 166 57.8
Duzib116G0948 Durio zibethinus HOM05D000194 ORTHO05D000069 7.7e-44 181.0 170 59.4
Dinv39203 Davidia involucrata HOM05D000194 ORTHO05D000069 7.5e-39 164.5 152 60.5
Cpa.g.sc160.32 Carica papaya HOM05D000194 ORTHO05D000069 1.7e-38 163.3 170 51.2
TWI56G1122 Tripterygium wilfordii HOM05D000194 ORTHO05D000069 2.9e-38 162.5 165 55.2
TAR381G0128 Trochodendron aralioides HOM05D000194 ORTHO05D000069 4.9e-38 161.8 166 53.6
TAR625G1060 Trochodendron aralioides HOM05D000194 ORTHO05D000069 4.1e-37 158.7 165 54.5
Gohir.D06G023700 Gossypium hirsutum HOM05D000194 ORTHO05D000069 3.3e-34 149.1 165 55.8
TWI12G0712 Tripterygium wilfordii HOM05D000194 ORTHO05D000069 4.3e-34 148.7 167 52.7
Gorai.010G028200 Gossypium raimondii HOM05D000194 ORTHO05D000069 9.5e-34 147.5 165 55.2
Gohir.A06G026400 Gossypium hirsutum HOM05D000194 ORTHO05D000069 1.6e-33 146.7 165 54.5
Potri.005G146500 Populus trichocarpa HOM05D000194 ORTHO05D000069 1.5e-31 140.2 166 49.4
Manes.18G050100 Manihot esculenta HOM05D000194 ORTHO05D000069 5.8e-31 138.3 169 49.7
Sabra05G0116900 Salix brachista HOM05D000194 ORTHO05D000069 5.8e-31 138.3 164 48.8
Lj4A76T63 Lonicera japonica HOM05D000194 ORTHO05D000069 9.8e-31 137.5 169 50.3
Potri.002G114700 Populus trichocarpa HOM05D000194 ORTHO05D000069 3.7e-30 135.6 159 49.1
Hund05272 Selenicereus undatus HOM05D000194 ORTHO05D000069 4.9e-30 135.2 171 45.6
TAR628G1056 Trochodendron aralioides HOM05D000194 ORTHO05D000069 1.1e-29 134.0 165 50.3
Sabra02G0090700 Salix brachista HOM05D000194 ORTHO05D000069 9.2e-29 131.0 156 48.1
VMungo0647G2249 Vigna mungo HOM05D000194 ORTHO05D000069 1.6e-28 130.2 172 48.3
Cc10_g07700 Coffea canephora HOM05D000194 ORTHO05D000069 3.0e-27 125.9 160 46.2
Glyma.14G089600 Glycine max HOM05D000194 ORTHO05D000069 6.6e-27 124.8 172 46.5
Oeu022011.1 Olea europaea HOM05D000194 ORTHO05D000069 2.5e-26 122.9 167 46.1
Lj5g0000208 Lotus japonicus HOM05D000194 ORTHO05D000069 5.6e-26 121.7 172 45.9
Nn5g30674 Nelumbo nucifera HOM05D000194 ORTHO05D000069 5.6e-26 121.7 168 47.0
Oeu035889.1 Olea europaea HOM05D000194 ORTHO05D000069 1.2e-25 120.6 167 43.1
Lalb_Chr22g0355841 Lupinus albus HOM05D000194 ORTHO05D000069 2.1e-25 119.8 166 45.2
Nn6g34531 Nelumbo nucifera HOM05D000194 ORTHO05D000069 2.8e-25 119.4 169 47.3
EL10Ac1g02345 Beta vulgaris HOM05D000194 ORTHO05D000069 4.7e-25 118.6 171 43.3
DCAR_020069 Daucus carota HOM05D000194 ORTHO05D000069 1.1e-24 117.5 171 45.6
Glyma.17G232285 Glycine max HOM05D000194 ORTHO05D000069 8.9e-24 114.4 170 46.5
Eucgr.F02220 Eucalyptus grandis HOM05D000194 ORTHO05D000069 7.5e-23 111.3 169 43.8
Lalb_Chr24g0399521 Lupinus albus HOM05D000194 ORTHO05D000069 8.3e-22 107.8 162 42.6
Rhsim06G0065000 Rhododendron simsii HOM05D000194 ORTHO05D000069 1.4e-21 107.1 170 44.7
Lalb_Chr14g0368001 Lupinus albus HOM05D000194 ORTHO05D000069 2.4e-21 106.3 169 43.2
MSTRG.24392 Avicennia marina HOM05D000194 ORTHO05D000069 4.1e-21 105.5 167 41.3
ClCG05G026510 Citrullus lanatus HOM05D000194 ORTHO05D000069 5.4e-21 105.1 141 47.5
MELO3C016841.2 Cucumis melo HOM05D000194 ORTHO05D000069 5.4e-21 105.1 140 45.7
CsaV3_4G035310 Cucumis sativus L. HOM05D000194 ORTHO05D000069 5.4e-21 105.1 140 45.7
PGR031G0517 Punica granatum HOM05D000194 ORTHO05D000069 5.4e-21 105.1 156 42.3
Sc15g0005360 Simmondsia chinensis HOM05D000194 ORTHO05D000069 2.1e-20 103.2 168 39.9
CSS0021114 Camellia sinensis var. sinensis HOM05D000194 ORTHO05D000069 2.7e-20 102.8 173 43.4
Ah.05g166900 Amaranthus hybridus HOM05D000285 ORTHO05D000069 6.0e-20 101.7 163 39.9
PSO675G4922 Papaver somniferum HOM05D000194 ORTHO05D000069 6.0e-20 101.7 169 39.6
Medtr1g017350 Medicago truncatula HOM05D000194 ORTHO05D000069 1.7e-19 100.1 177 42.4
SalBow7G1715 Salvia bowleyana HOM05D000194 ORTHO05D000069 6.6e-19 98.2 165 41.8
TPR.G13081 Trifolium pratense HOM05D000194 ORTHO05D000069 8.6e-19 97.8 177 41.8
Ca_06984_v3 Cicer arietinum L. HOM05D000194 ORTHO05D000069 4.3e-18 95.5 180 40.6
MSTRG.25018 Avicennia marina HOM05D000194 ORTHO05D000069 9.5e-18 94.4 172 40.1
Psat6g016800 Pisum sativum HOM05D000194 ORTHO05D000069 2.1e-17 93.2 176 42.0
vmacro21411 Vaccinium macrocarpon HOM05D000194 ORTHO05D000069 3.6e-17 92.4 170 40.6
AUR62034991 Chenopodium quinoa HOM05D000194 ORTHO05D000069 6.2e-17 91.7 172 36.6
Aqoxy6G02441 Aquilegia oxysepala HOM05D000194 ORTHO05D000069 1.4e-16 90.5 163 41.1
AUR62037403 Chenopodium quinoa HOM05D000194 ORTHO05D000069 1.8e-16 90.1 173 37.0
Lalb_Chr08g0245171 Lupinus albus HOM05D000194 ORTHO05D000069 2.3e-16 89.7 160 38.1
Nitab4.5_0009818g0020 Nicotiana tabacum HOM05D000194 ORTHO05D000069 5.2e-16 88.6 159 37.7
Actinidia10226 Actinidia chinensis HOM05D000194 ORTHO05D000069 8.9e-16 87.8 114 45.6
Actinidia19291 Actinidia chinensis HOM05D000194 ORTHO05D000069 8.9e-16 87.8 114 45.6
Nitab4.5_0001494g0050 Nicotiana tabacum HOM05D000194 ORTHO05D000069 8.9e-16 87.8 159 37.1
CSS0031287 Camellia sinensis var. sinensis HOM05D000194 ORTHO05D000069 1.2e-15 87.4 172 39.0
PSO541G0321 Papaver somniferum HOM05D000194 ORTHO05D000069 1.2e-15 87.4 126 40.5
PSO170G1072 Papaver somniferum HOM05D000194 ORTHO05D000069 7.6e-15 84.7 171 38.0
PSO017G5338 Papaver somniferum HOM05D000194 ORTHO05D000069 4.9e-14 82.0 171 37.4
Solyc04g077480.3 Solanum lycopersicum HOM05D000194 ORTHO05D000069 6.4e-14 81.6 145 35.9
PGSC0003DMG400004922 Solanum tuberosum HOM05D000194 ORTHO05D000069 6.4e-14 81.6 145 35.9
Phvul.001G031300 Phaseolus vulgaris HOM05D000194 ORTHO05D000069 8.4e-14 81.3 95 48.4
Sopen04g031080 Solanum pennellii HOM05D000194 ORTHO05D000069 8.4e-14 81.3 145 35.9
Peaxi162Scf01161g00122 Petunia axillaris HOM05D000194 ORTHO05D000069 5.4e-13 78.6 143 37.8
Glyma.04G048000 Glycine max HOM05D000194 ORTHO05D000069 7.1e-13 78.2 129 40.3
Dinv26962 Davidia involucrata HOM05D000194 ORTHO05D000069 1.6e-12 77.0 150 34.0
CAN.G416.1 Capsicum annuum HOM05D000194 ORTHO05D000069 7.8e-12 74.7 134 36.6
arahy.Tifrunner.gnm1.ann1.TWQ0V4 Arachis hypogaea HOM05D000194 ORTHO05D000069 2.5e-10 69.7 171 34.5
arahy.Tifrunner.gnm1.ann1.W9Z2JH Arachis hypogaea HOM05D000194 ORTHO05D000069 2.5e-10 69.7 171 34.5
Eucgr.F00100 Eucalyptus grandis HOM05D000194 ORTHO05D000069 4.3e-10 68.9 171 33.3
Glyma.06G049300 Glycine max HOM05D000194 ORTHO05D000069 1.6e-09 67.0 135 38.5
Sed0003292 Sechium edule HOM05D000194 ORTHO05D000069 3.6e-09 65.9 159 35.2
Sed0006513 Sechium edule HOM05D000194 ORTHO05D000069 2.4e-08 63.2 154 33.1
GSVIVG01007389001 Vitis vinifera HOM05D000194 ORTHO05D000069 5.2e-08 62.0 160 31.9
Lsat_1_v5_gn_1_681 Lactuca sativa HOM05D000194 ORTHO05D000069 3.4e-07 59.3 116 39.7
Migut.N02799 Erythranthe guttata HOM05D000194 ORTHO05D000069 9.9e-07 57.8 122 30.3
HanXRQChr08g0226621 Helianthus annuus HOM05D000194 ORTHO05D000069 4.9e-06 55.5 155 32.9
VMungo1215G3218 Vigna mungo HOM05D000194 ORTHO05D000069 4.9e-06 55.5 78 41.0


User provided reference genes

Program Settings