Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.869 Acer truncatum HOM05D011270 ORTHO05D012905 7.3e-127 457.2 227 100.0
Gohir.A01G123600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.6e-17 94.0 158 37.3
COL.COLO4_28460 Corchorus olitorius HOM05D005317 ORTHO05D005146 1.8e-16 90.5 159 36.5
Gohir.D01G111432 Gossypium hirsutum HOM05D005317 ORTHO05D005146 8.9e-16 88.2 158 36.1
Gorai.002G136200 Gossypium raimondii HOM05D005317 ORTHO05D005146 8.9e-16 88.2 150 37.3
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 2.6e-15 86.7 160 37.5
Gorai.010G027400 Gossypium raimondii HOM05D005317 ORTHO05D005146 7.5e-15 85.1 164 37.2
Oeu053645.1 Olea europaea HOM05D005317 ORTHO05D005146 1.7e-14 84.0 160 37.5
Gohir.D06G022800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.2e-14 83.6 160 38.1
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 3.7e-14 82.8 157 38.9
Gohir.A06G025700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 4.9e-14 82.4 160 36.9
Thecc.08G084600 Theobroma cacao HOM05D005317 ORTHO05D005146 6.4e-14 82.0 159 35.8
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 2.4e-13 80.1 153 37.9
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 2.4e-13 80.1 153 39.9
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.2e-12 77.8 162 34.0
Manes.05G183600 Manihot esculenta HOM05D005317 ORTHO05D005146 2.0e-12 77.0 157 38.9
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 2.0e-12 77.0 162 38.9
Potri.014G012900 Populus trichocarpa HOM05D005317 ORTHO05D005146 3.5e-12 76.3 159 35.8
SalBow4G3082 Salvia bowleyana HOM05D005317 ORTHO05D005146 3.5e-12 76.3 160 35.6
A06p06850 Brassica napus HOM05D011270 ORTHO05D012905 5.9e-12 75.5 159 34.6
BraA06t23899Z Brassica rapa HOM05D011270 ORTHO05D012905 5.9e-12 75.5 159 34.6
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 7.8e-12 75.1 166 35.5
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.3e-11 74.3 165 31.5
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.3e-11 74.3 162 33.3
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 1.3e-11 74.3 154 34.4
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.3e-11 74.3 153 38.6
BolC5t29583H Brassica oleracea HOM05D011270 ORTHO05D012905 1.7e-11 73.9 157 33.8
Glyma.06G048700 Glycine max HOM05D005317 ORTHO05D005146 1.7e-11 73.9 151 35.1
BolC8t48976H Brassica oleracea HOM05D011270 ORTHO05D012905 2.3e-11 73.6 171 33.9
Cfa013739 Carpinus fangiana HOM05D005317 ORTHO05D005146 3.0e-11 73.2 156 32.7
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 3.9e-11 72.8 165 33.3
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 3.9e-11 72.8 170 35.3
C05p08330 Brassica napus HOM05D011270 ORTHO05D012905 5.0e-11 72.4 152 34.9
Gohir.D05G215300 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.0e-11 72.4 157 36.9
TPR.G13134 Trifolium pratense HOM05D014755 ORTHO05D005146 8.6e-11 71.6 169 30.8
C08p13500 Brassica napus HOM05D011270 ORTHO05D012905 1.1e-10 71.2 171 33.9
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 1.1e-10 71.2 162 35.2
BcaC07g38545 Brassica carinata HOM05D011270 ORTHO05D012905 1.5e-10 70.9 171 33.3
BcaC07g38551 Brassica carinata HOM05D011270 ORTHO05D012905 1.5e-10 70.9 171 33.3
BcaC07g38553 Brassica carinata HOM05D011270 ORTHO05D012905 1.5e-10 70.9 171 33.9
BolC8t48985H Brassica oleracea HOM05D011270 ORTHO05D012905 1.5e-10 70.9 171 33.3
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 1.5e-10 70.9 164 34.8
Haze_22391 Corylus avellana HOM05D005317 ORTHO05D005146 1.9e-10 70.5 180 27.8
Atru.chr3.1057 Acer truncatum HOM05D005317 ORTHO05D005146 4.3e-10 69.3 173 31.8
Cfa013738 Carpinus fangiana HOM05D005317 ORTHO05D005146 4.3e-10 69.3 152 32.2
A08p34120 Brassica napus HOM05D011270 ORTHO05D012905 5.6e-10 68.9 171 33.3
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 1.2e-09 67.8 148 33.8
DCAR_009867 Daucus carota HOM05D005317 ORTHO05D005146 2.8e-09 66.6 163 28.8
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 3.6e-09 66.2 97 46.4
Lj4C75G10 Lonicera japonica HOM05D002048 ORTHO05D002146 3.6e-09 66.2 127 38.6
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 4.7e-09 65.9 158 31.6
BraA08t35324Z Brassica rapa HOM05D011270 ORTHO05D012905 6.2e-09 65.5 171 32.2
Sopen04g031150 Solanum pennellii HOM05D005317 ORTHO05D005146 6.2e-09 65.5 161 32.3
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 8.0e-09 65.1 162 35.8
Gorai.009G222000 Gossypium raimondii HOM05D005317 ORTHO05D005146 8.0e-09 65.1 159 34.6
BcaC05g24800 Brassica carinata HOM05D011270 ORTHO05D012905 1.0e-08 64.7 127 33.1
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 1.0e-08 64.7 163 35.0
Haze_22390 Corylus avellana HOM05D000071 ORTHO05D000029 1.4e-08 64.3 150 31.3
Migut.C00473 Erythranthe guttata HOM05D005317 ORTHO05D005146 1.8e-08 63.9 162 32.7
Haze_15027 Corylus avellana HOM05D005317 ORTHO05D005146 2.3e-08 63.5 150 33.3
CiPaw.07G172000 Carya illinoinensis HOM05D005317 ORTHO05D005146 3.1e-08 63.2 153 32.7
DCAR_020064 Daucus carota HOM05D005317 ORTHO05D005146 3.1e-08 63.2 154 29.9
Phvul.001G030800 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 4.0e-08 62.8 150 35.3
Oeu014288.1 Olea europaea HOM05D005317 ORTHO05D005146 5.2e-08 62.4 164 31.1
Cpa.g.c31093.6 Carica papaya HOM05D005317 ORTHO05D005146 8.9e-08 61.6 165 29.7
Potri.007G007000 Populus trichocarpa HOM05D005317 ORTHO05D005146 8.9e-08 61.6 167 30.5
Sabra07G0005300 Salix brachista HOM05D005317 ORTHO05D005146 8.9e-08 61.6 151 29.1
Ciclev10026641m.g Citrus clementina HOM05D005317 ORTHO05D005146 1.2e-07 61.2 168 31.5
Cc10_g07630 Coffea canephora HOM05D005317 ORTHO05D005146 1.2e-07 61.2 164 31.7
Lj5g0002019 Lotus japonicus HOM05D005317 ORTHO05D005146 1.2e-07 61.2 150 34.7
Phvul.009G074100 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 1.2e-07 61.2 145 32.4
Prupe.1G419200 Prunus persica HOM05D005317 ORTHO05D005146 1.5e-07 60.8 164 31.1
Sp1g08810 Schrenkiella parvula HOM05D001270 ORTHO05D001099 1.5e-07 60.8 136 32.4
VMungo0647G0350 Vigna mungo HOM05D014755 ORTHO05D005146 1.5e-07 60.8 156 29.5
Carub.0001s0960 Capsella rubella HOM05D011270 ORTHO05D012905 2.0e-07 60.5 164 29.9
Glyma.14G089087 Glycine max HOM05D014755 ORTHO05D005146 2.0e-07 60.5 148 29.1
CARHR010290 Cardamine hirsuta HOM05D011270 ORTHO05D012905 2.6e-07 60.1 168 31.0
Eucgr.H02331 Eucalyptus grandis HOM05D005317 ORTHO05D005146 2.6e-07 60.1 178 30.9
Dinv23042 Davidia involucrata HOM05D005317 ORTHO05D005146 3.4e-07 59.7 142 35.9
VMungo1309G2313 Vigna mungo HOM05D005317 ORTHO05D005146 3.4e-07 59.7 154 32.5
Manes.13G109200 Manihot esculenta HOM05D005317 ORTHO05D005146 4.4e-07 59.3 170 33.5
Gohir.D05G215433 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.8e-07 58.9 145 33.1
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 7.5e-07 58.5 160 33.8
VMungo0647G1960 Vigna mungo HOM05D005317 ORTHO05D005146 7.5e-07 58.5 150 34.7
Phvul.001G030900 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 1.3e-06 57.8 142 29.6
Psat6g017280 Pisum sativum HOM05D005317 ORTHO05D005146 1.3e-06 57.8 148 31.8
Actinidia10221 Actinidia chinensis HOM05D005317 ORTHO05D005146 1.7e-06 57.4 98 42.9
Lalb_Chr24g0399511 Lupinus albus HOM05D005317 ORTHO05D005146 1.7e-06 57.4 148 33.1
Cfa004386 Carpinus fangiana HOM05D005317 ORTHO05D005146 2.2e-06 57.0 151 32.5
COL.COLO4_11612 Corchorus olitorius HOM05D005317 ORTHO05D005146 2.2e-06 57.0 162 30.9
CiPaw.07G172100 Carya illinoinensis HOM05D005317 ORTHO05D005146 2.9e-06 56.6 154 31.8
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.9e-06 56.6 154 31.2
Lj5g0011909 Lotus japonicus HOM05D014755 ORTHO05D005146 3.7e-06 56.2 152 29.6
Atru.chr13.870 Acer truncatum HOM05D005317 ORTHO05D005146 4.9e-06 55.8 143 35.0
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 4.9e-06 55.8 147 32.0


User provided reference genes

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