Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.86 Acer truncatum HOM05D001003 ORTHO05D002734 1.4e-54 216.1 110 100.0
Dinv31975 Davidia involucrata HOM05D001003 ORTHO05D002734 2.7e-26 122.1 122 61.5
Ciclev10000614m.g Citrus clementina HOM05D001003 ORTHO05D002734 6.0e-26 120.9 118 63.6
TWI12G0434 Tripterygium wilfordii HOM05D001003 ORTHO05D002734 6.0e-26 120.9 121 58.7
Haze_22841 Corylus avellana HOM05D001003 ORTHO05D002734 2.3e-25 119.0 121 57.9
Cfa014120 Carpinus fangiana HOM05D001003 ORTHO05D002734 3.0e-25 118.6 121 57.0
Lj4A810T51 Lonicera japonica HOM05D001003 ORTHO05D002734 1.1e-24 116.7 121 57.0
Nitab4.5_0001756g0190 Nicotiana tabacum HOM05D001003 ORTHO05D002734 3.3e-24 115.2 123 55.3
CAN.G2106.2 Capsicum annuum HOM05D001003 ORTHO05D002734 4.3e-24 114.8 123 56.1
Hma1.2p1_0699F.1_g205620 Hydrangea macrophylla HOM05D001003 ORTHO05D002734 4.3e-24 114.8 121 57.0
TAR628G0861 Trochodendron aralioides HOM05D001003 ORTHO05D002734 9.5e-24 113.6 121 58.7
Actinidia15514 Actinidia chinensis HOM05D001003 ORTHO05D002734 1.6e-23 112.8 118 58.5
Actinidia17066 Actinidia chinensis HOM05D001003 ORTHO05D002734 1.6e-23 112.8 117 59.0
Sopen04g036280 Solanum pennellii HOM05D001003 ORTHO05D002734 1.6e-23 112.8 122 54.1
Peaxi162Scf00680g00416 Petunia axillaris HOM05D001003 ORTHO05D002734 2.1e-23 112.5 120 56.7
Solyc04g082650.3 Solanum lycopersicum HOM05D001003 ORTHO05D002734 3.6e-23 111.7 122 53.3
PGSC0003DMG400009915 Solanum tuberosum HOM05D001003 ORTHO05D002734 8.1e-23 110.5 122 54.1
CSS0016131 Camellia sinensis var. sinensis HOM05D001003 ORTHO05D002734 1.4e-22 109.8 118 57.6
Actinidia37911 Actinidia chinensis HOM05D001003 ORTHO05D002734 3.1e-22 108.6 119 58.8
CiPaw.08G076100 Carya illinoinensis HOM05D001003 ORTHO05D002734 3.1e-22 108.6 121 53.7
PGR031G2960 Punica granatum HOM05D001003 ORTHO05D002734 4.0e-22 108.2 123 53.7
MSTRG.997 Avicennia marina HOM05D001003 ORTHO05D002734 6.8e-22 107.5 111 53.2
Eucgr.F03582 Eucalyptus grandis HOM05D001003 ORTHO05D002734 8.9e-22 107.1 117 53.0
Prupe.5G007200 Prunus persica HOM05D001003 ORTHO05D002734 8.9e-22 107.1 116 57.8
SalBow7G0783 Salvia bowleyana HOM05D001003 ORTHO05D002734 8.9e-22 107.1 107 56.1
QL02p015288 Quercus lobata HOM05D001003 ORTHO05D002734 1.5e-21 106.3 121 54.5
TPR.G38087 Trifolium pratense HOM05D001003 ORTHO05D002734 2.0e-21 105.9 122 53.3
Oeu035854.1 Olea europaea HOM05D001003 ORTHO05D002734 1.7e-20 102.8 122 49.2
Ca_15394_v3 Cicer arietinum L. HOM05D001003 ORTHO05D002734 3.8e-20 101.7 121 51.2
TAR376G0592 Trochodendron aralioides HOM05D001003 ORTHO05D002734 3.8e-20 101.7 122 54.1
arahy.Tifrunner.gnm1.ann1.5AJ9B8 Arachis hypogaea HOM05D001003 ORTHO05D002734 6.4e-20 100.9 120 51.7
Gohir.A05G177900 Gossypium hirsutum HOM05D001003 ORTHO05D002734 6.4e-20 100.9 114 51.8
arahy.Tifrunner.gnm1.ann1.HE6EBR Arachis hypogaea HOM05D001003 ORTHO05D002734 3.2e-19 98.6 120 50.8
COL.COLO4_05302 Corchorus olitorius HOM05D001003 ORTHO05D002734 5.4e-19 97.8 108 50.9
PSO675G5204 Papaver somniferum HOM05D001003 ORTHO05D002734 5.4e-19 97.8 121 46.3
Thecc.08G063500 Theobroma cacao HOM05D001003 ORTHO05D002734 9.2e-19 97.1 124 45.2
Psat5g010240 Pisum sativum HOM05D001003 ORTHO05D002734 1.2e-18 96.7 121 52.1
Manes.05G125500 Manihot esculenta HOM05D001003 ORTHO05D002734 2.1e-18 95.9 122 51.6
Aqoxy6G01568 Aquilegia oxysepala HOM05D001003 ORTHO05D002734 2.7e-18 95.5 124 47.6
Gorai.009G186300 Gossypium raimondii HOM05D001003 ORTHO05D002734 2.7e-18 95.5 112 47.3
Duzib116G0660 Durio zibethinus HOM05D001003 ORTHO05D002734 6.0e-18 94.4 112 48.2
PSO541G3668 Papaver somniferum HOM05D001003 ORTHO05D002734 6.0e-18 94.4 121 46.3
Cc10_g00380 Coffea canephora HOM05D001003 ORTHO05D002734 1.0e-17 93.6 122 49.2
FAN08G2256 Fragaria x ananassa HOM05D001003 ORTHO05D002734 1.3e-17 93.2 115 53.0
FvH4_5g25830 Fragaria vesca HOM05D001003 ORTHO05D002734 1.7e-17 92.8 116 52.6
Potri.005G254432 Populus trichocarpa HOM05D001003 ORTHO05D002734 1.7e-17 92.8 126 47.6
MBI08_g29082_MAGBIO Magnolia biondii HOM05D001003 ORTHO05D002734 2.3e-17 92.4 104 53.8
Potri.002G006900 Populus trichocarpa HOM05D001003 ORTHO05D002734 2.3e-17 92.4 125 46.4
Glyma.06G015600 Glycine max HOM05D001003 ORTHO05D002734 3.9e-17 91.7 121 50.4
Medtr3g115950 Medicago truncatula HOM05D001003 ORTHO05D002734 3.9e-17 91.7 120 49.2
Sabra02G0005200 Salix brachista HOM05D001003 ORTHO05D002734 3.9e-17 91.7 125 46.4
vmacro21780 Vaccinium macrocarpon HOM05D001003 ORTHO05D002734 5.1e-17 91.3 122 50.0
VMungo1309G2428 Vigna mungo HOM05D001003 ORTHO05D002734 5.1e-17 91.3 121 48.8
RcHm_v2.0_Chr7g0216301 Rosa chinensis HOM05D001003 ORTHO05D002734 6.6e-17 90.9 115 53.0
FAN04G2574 Fragaria x ananassa HOM05D001003 ORTHO05D002734 8.7e-17 90.5 115 52.2
Lj1g0022108 Lotus japonicus HOM05D001003 ORTHO05D002734 8.7e-17 90.5 120 50.8
Glyma.04G015600 Glycine max HOM05D001003 ORTHO05D002734 1.1e-16 90.1 121 48.8
EL10Ac1g01898 Beta vulgaris HOM05D001003 ORTHO05D002734 1.9e-16 89.4 102 49.0
Lj4C6T5 Lonicera japonica HOM05D001003 ORTHO05D002734 1.9e-16 89.4 117 54.7
Ah.11g041870 Amaranthus hybridus HOM05D001003 ORTHO05D002734 2.5e-16 89.0 112 49.1
Phvul.009G006900 Phaseolus vulgaris HOM05D001003 ORTHO05D002734 3.3e-16 88.6 123 47.2
DCAR_013935 Daucus carota HOM05D001003 ORTHO05D002734 5.6e-16 87.8 111 48.6
Gohir.D05G181300 Gossypium hirsutum HOM05D001003 ORTHO05D002734 5.6e-16 87.8 112 44.6
Rhsim06G0004400 Rhododendron simsii HOM05D001003 ORTHO05D002734 5.6e-16 87.8 122 48.4
ECA232G4159 Erigeron canadensis HOM05D001003 ORTHO05D002734 9.6e-16 87.0 93 55.9
Sabra05G0197200 Salix brachista HOM05D001003 ORTHO05D002734 1.6e-15 86.3 125 42.4
Lalb_Chr23g0265621 Lupinus albus HOM05D001003 ORTHO05D002734 2.1e-15 85.9 121 49.6
AUR62035154 Chenopodium quinoa HOM05D001003 ORTHO05D002734 6.2e-15 84.3 102 48.0
AUR62042590 Chenopodium quinoa HOM05D001003 ORTHO05D002734 6.2e-15 84.3 103 48.5
HanXRQChr05g0144781 Helianthus annuus HOM05D001003 ORTHO05D002734 1.1e-14 83.6 93 52.7
Hund05087 Selenicereus undatus HOM05D001003 ORTHO05D002734 1.8e-14 82.8 96 46.9
HanXRQChr15g0492521 Helianthus annuus HOM05D001003 ORTHO05D002734 4.0e-14 81.6 93 54.8
FAN13G3154 Fragaria x ananassa HOM05D001003 ORTHO05D002734 1.2e-13 80.1 115 50.4
CANSAT56G4325 Cannabis sativa HOM05D001003 ORTHO05D002734 1.3e-12 76.6 104 50.0
AUR62042582 Chenopodium quinoa HOM05D001003 ORTHO05D002734 1.9e-11 72.8 87 50.6
ECA238G1323 Erigeron canadensis HOM05D000190 ORTHO05D002734 3.2e-11 72.0 105 46.7
Sc26g0004690 Simmondsia chinensis HOM05D001003 ORTHO05D002734 4.2e-11 71.6 99 45.5
Lsat_1_v5_gn_9_41841 Lactuca sativa HOM05D001003 ORTHO05D002734 1.0e-09 67.0 104 46.2
HanXRQChr14g0427891 Helianthus annuus HOM05D001003 ORTHO05D002734 1.3e-09 66.6 128 42.2
unitig_26.g9879 Utricularia gibba HOM05D001003 ORTHO05D002734 1.7e-09 66.2 105 45.7
Lalb_Chr11g0061441 Lupinus albus HOM05D001003 ORTHO05D002734 2.3e-09 65.9 123 43.9
Os04g0585100 Oryza sativa ssp. japonica HOM05D001003 ORTHO05D002734 2.8e-07 58.9 95 40.0
Cpa.g.sc26.155 Carica papaya HOM05D001003 ORTHO05D002734 3.6e-07 58.5 56 51.8
Lsat_1_v5_gn_2_421 Lactuca sativa HOM05D001003 ORTHO05D002734 4.0e-06 55.1 130 36.2


User provided reference genes

Program Settings