Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 3.1e-267 924.5 441 100.0
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 8.7e-185 650.6 441 72.3
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 5.3e-142 508.4 454 58.6
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 6.5e-140 501.5 445 57.8
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 6.5e-140 501.5 460 56.5
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 8.5e-140 501.1 457 56.2
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 1.1e-139 500.7 455 58.9
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 1.5e-139 500.4 445 58.0
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 2.5e-139 499.6 458 55.9
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 7.2e-139 498.0 452 57.5
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 9.4e-139 497.7 451 57.0
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.6e-138 496.9 452 57.5
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.6e-138 496.9 451 57.0
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 2.7e-138 496.1 458 56.1
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 3.6e-138 495.7 459 56.6
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 1.0e-137 494.2 452 57.7
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 1.4e-137 493.8 452 57.7
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 1.8e-137 493.4 458 57.9
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 4.0e-137 492.3 447 57.0
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.5e-136 490.3 461 56.0
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 4.4e-136 488.8 451 56.3
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 1.3e-135 487.3 455 57.4
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 2.9e-132 476.1 452 55.3
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 1.9e-131 473.4 455 54.3
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 1.8e-129 466.8 450 54.7
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 5.2e-129 465.3 457 53.8
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 6.8e-129 464.9 452 52.9
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 2.0e-128 463.4 450 54.4
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 2.0e-128 463.4 462 54.5
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 4.4e-128 462.2 454 54.4
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 5.7e-128 461.8 456 55.0
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 1.3e-127 460.7 460 53.9
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 2.2e-127 459.9 460 52.6
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 2.2e-127 459.9 453 54.1
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 1.4e-126 457.2 461 54.0
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 9.1e-126 454.5 453 54.3
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 2.7e-125 453.0 445 53.7
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 2.9e-124 449.5 445 54.6
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 6.6e-124 448.4 447 53.0
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 6.6e-124 448.4 451 54.5
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 1.9e-123 446.8 448 52.9
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.9e-123 446.8 448 52.9
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 1.9e-123 446.8 445 54.4
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 3.3e-123 446.0 450 53.6
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 4.2e-123 445.7 471 52.4
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 7.2e-123 444.9 448 52.7
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 8.0e-122 441.4 449 53.5
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 8.0e-122 441.4 464 51.5
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 8.0e-122 441.4 447 53.2
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 3.0e-121 439.5 450 52.7
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 5.2e-121 438.7 448 51.8
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.2e-120 437.6 449 52.1
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 2.6e-120 436.4 457 52.7
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 4.4e-120 435.6 444 53.2
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 9.8e-120 434.5 450 53.8
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 1.7e-119 433.7 468 51.9
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 2.8e-119 433.0 443 51.7
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 2.8e-119 433.0 466 51.1
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 8.3e-119 431.4 451 51.0
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 1.4e-118 430.6 449 51.7
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 1.8e-118 430.3 460 51.3
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 9.2e-118 427.9 445 51.0
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 2.7e-117 426.4 472 50.2
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 1.3e-116 424.1 458 50.9
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 1.7e-116 423.7 457 51.0
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 2.9e-116 422.9 454 52.4
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 7.3e-115 418.3 453 48.6
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 2.8e-114 416.4 438 51.6
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 1.4e-113 414.1 447 51.2
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 2.6e-112 409.8 436 51.4
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 7.5e-112 408.3 435 50.6
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 4.1e-110 402.5 455 49.7
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 7.0e-110 401.7 437 50.6
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 1.2e-109 401.0 456 50.7
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 3.0e-108 396.4 449 47.9
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 7.3e-107 391.7 437 50.8
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 9.5e-107 391.3 440 49.8
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 9.5e-107 391.3 440 49.8
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 4.7e-106 389.0 440 49.5
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 2.3e-105 386.7 435 49.4
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 1.2e-104 384.4 444 47.5
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 2.9e-103 379.8 458 48.7
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 5.4e-102 375.6 424 49.5
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 6.0e-101 372.1 443 47.9
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 5.1e-100 369.0 482 46.3
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 5.1e-100 369.0 434 47.5
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 1.9e-99 367.1 448 47.3
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 4.3e-99 365.9 439 47.6
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 5.6e-99 365.5 406 50.0
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 1.2e-98 364.4 449 44.8
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.2e-98 364.4 426 48.8
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 8.9e-97 358.2 439 46.7
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 4.9e-95 352.4 440 46.8
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 3.9e-92 342.8 439 43.5
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.7e-87 327.4 442 43.4
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 7.1e-86 322.0 441 43.3
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 1.6e-85 320.9 306 55.9
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 7.1e-78 295.4 319 52.7
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 2.7e-69 266.9 352 42.0
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 5.3e-65 252.7 489 35.4
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 4.2e-62 243.0 247 51.8
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 9.3e-62 241.9 312 49.4
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.8e-60 237.7 277 46.6
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 3.9e-60 236.5 272 48.9
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 6.9e-57 225.7 338 38.2
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 1.2e-48 198.4 375 37.1
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 5.9e-48 196.1 511 31.7
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 5.0e-47 193.0 224 47.8
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 1.5e-40 171.4 357 31.9
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.1e-30 138.7 127 50.4
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 7.2e-30 136.0 150 50.0
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.6e-29 134.8 99 58.6
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 2.7e-29 134.0 551 24.3
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 4.0e-28 130.2 188 39.4
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 9.7e-27 125.6 102 57.8
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 6.3e-26 122.9 118 55.9
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 4.4e-19 100.1 231 34.2
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 2.2e-18 97.8 91 53.8
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 2.8e-18 97.4 105 45.7
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.2e-16 92.0 65 60.0
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 5.9e-16 89.7 53 77.4
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 1.5e-14 85.1 77 61.0
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 4.2e-14 83.6 166 35.5
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 6.1e-13 79.7 96 44.8
Pp3c17_16670 Physcomitrium patens HOM05D003519 ORTHO05D004443 2.5e-06 57.8 154 25.3
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 4.3e-06 57.0 118 36.4


User provided reference genes

Program Settings