Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 1.7e-196 689.1 344 100.0
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 3.3e-155 552.0 342 78.7
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 6.0e-149 531.2 345 75.9
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 1.2e-144 516.9 346 74.9
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 3.4e-144 515.4 345 75.1
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 1.7e-143 513.1 345 74.5
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 2.2e-143 512.7 345 74.5
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 2.9e-143 512.3 343 73.8
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 3.8e-143 511.9 347 74.4
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 1.9e-142 509.6 344 73.5
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 5.8e-136 488.0 344 70.1
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 1.7e-135 486.5 344 70.3
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 1.1e-134 483.8 343 69.1
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 7.1e-134 481.1 344 71.2
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 1.2e-133 480.3 345 70.7
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 5.1e-132 474.9 344 70.6
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 6.7e-132 474.6 345 72.5
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 1.9e-131 473.0 346 67.6
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 3.3e-131 472.2 345 67.8
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 7.4e-131 471.1 343 67.9
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 3.7e-130 468.8 342 69.3
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 1.1e-129 467.2 342 67.3
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 1.4e-129 466.8 351 66.4
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 1.2e-128 463.8 344 69.2
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 1.0e-127 460.7 346 67.6
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 4.9e-127 458.4 341 66.6
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 4.9e-127 458.4 345 66.4
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 6.5e-127 458.0 342 68.1
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 5.5e-126 454.9 346 65.9
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 2.7e-125 452.6 345 66.1
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 3.5e-125 452.2 344 65.7
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 4.6e-125 451.8 342 68.1
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.0e-124 450.7 342 65.5
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.1e-123 447.2 357 63.6
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 4.3e-123 445.3 277 77.6
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 5.7e-123 444.9 343 65.0
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 6.2e-122 441.4 345 64.9
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 8.2e-122 441.0 346 65.3
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 3.4e-120 435.6 345 63.8
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 1.0e-119 434.1 346 61.0
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 2.5e-118 429.5 279 76.3
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 3.5e-117 425.6 345 63.2
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 6.1e-117 424.9 345 63.2
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 3.9e-116 422.2 342 62.6
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 5.7e-115 418.3 345 60.6
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 2.8e-114 416.0 344 62.8
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 4.8e-114 415.2 342 60.8
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 6.3e-114 414.8 345 60.6
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 1.8e-113 413.3 345 60.9
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 9.0e-113 411.0 342 61.4
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 1.5e-112 410.2 342 61.1
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 5.9e-112 408.3 428 52.6
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 6.5e-111 404.8 340 60.9
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 1.2e-109 400.6 349 59.9
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 1.0e-108 397.5 344 61.9
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 2.3e-108 396.4 342 61.7
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 3.0e-108 396.0 380 56.6
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.1e-107 394.0 342 61.1
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 1.5e-107 393.7 348 58.9
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 3.3e-107 392.5 340 59.4
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.7e-106 390.2 342 60.8
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 1.7e-106 390.2 342 57.9
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 5.3e-105 385.2 342 60.8
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 2.6e-104 382.9 343 56.3
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 3.4e-104 382.5 338 58.6
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 1.3e-103 380.6 341 58.1
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 2.9e-103 379.4 353 57.8
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 3.8e-103 379.0 344 58.1
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 1.4e-102 377.1 355 58.3
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 6.1e-101 371.7 344 55.5
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.0e-100 370.9 345 56.5
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 1.4e-100 370.5 355 56.3
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 2.0e-99 366.7 346 58.1
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 4.8e-98 362.1 351 54.4
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 1.8e-97 360.1 335 56.4
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 9.1e-97 357.8 344 55.8
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 3.5e-96 355.9 354 54.5
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 5.9e-96 355.1 351 51.9
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 1.0e-95 354.4 349 52.1
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 1.0e-95 354.4 300 59.0
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 5.0e-95 352.1 344 54.1
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 8.0e-93 344.7 276 60.5
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 1.6e-88 330.5 285 59.3
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 5.9e-88 328.6 339 52.8
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 1.0e-87 327.8 297 56.2
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 1.9e-86 323.6 212 73.6
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 6.1e-85 318.5 342 50.0
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 5.7e-83 312.0 344 49.1
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 9.8e-75 284.6 212 66.5
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 5.4e-73 278.9 348 44.3
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 6.8e-60 235.3 252 52.4
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 1.3e-55 221.1 298 46.3
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 6.8e-52 208.8 173 56.6
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 9.8e-51 204.9 332 36.1
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 3.7e-50 203.0 176 58.0
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 3.2e-41 173.3 187 50.3
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 3.5e-40 169.9 298 36.9
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 4.4e-35 152.9 267 34.5
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 1.0e-31 141.7 199 42.7
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 1.3e-31 141.4 198 39.4
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 6.6e-31 139.0 128 54.7
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 1.5e-30 137.9 168 44.0
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 3.3e-30 136.7 130 56.2
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.1e-28 131.7 181 40.3
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 4.0e-28 129.8 93 69.9
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 1.6e-24 117.9 150 45.3
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 1.3e-23 114.8 105 56.2
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 3.3e-22 110.2 125 50.4
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 2.0e-19 100.9 107 49.5
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.3e-15 88.2 130 36.9
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 2.4e-12 77.4 78 55.1
Ah.09g227430 Amaranthus hybridus HOM05D006958 ORTHO05D008814 2.7e-08 63.9 69 44.9
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 2.3e-07 60.8 40 65.0
Nn5g30604 Nelumbo nucifera HOM05D006958 ORTHO05D008814 3.3e-06 57.0 74 43.2
HPP92_009560 Vanilla planifolia HOM05D001084 ORTHO05D001275 4.3e-06 56.6 52 53.8


User provided reference genes

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