Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.2470 Acer truncatum HOM05D007884 ORTHO05D009968 1.9e-106 389.8 297 100.0
Ciclev10019950m.g Citrus clementina HOM05D007884 ORTHO05D009968 1.1e-55 221.1 295 71.2
CiPaw.03G016000 Carya illinoinensis HOM05D007884 ORTHO05D009968 9.4e-50 201.4 294 60.9
Cpa.g.sc21.77 Carica papaya HOM05D007884 ORTHO05D009968 1.4e-48 197.6 283 60.4
Haze_13924 Corylus avellana HOM05D007884 ORTHO05D009968 2.3e-48 196.8 294 51.0
Cfa008093 Carpinus fangiana HOM05D007884 ORTHO05D009968 3.3e-47 193.0 294 39.8
Thecc.08G176500 Theobroma cacao HOM05D007884 ORTHO05D009968 1.7e-46 190.7 291 58.8
Duzib177G0356 Durio zibethinus HOM05D007884 ORTHO05D009968 5.3e-45 185.7 291 62.2
Actinidia29389 Actinidia chinensis HOM05D007884 ORTHO05D009968 4.5e-44 182.6 295 60.7
Dinv09394 Davidia involucrata HOM05D007884 ORTHO05D009968 2.5e-42 176.8 292 61.0
COL.COLO4_22419 Corchorus olitorius HOM05D007884 ORTHO05D009968 9.4e-42 174.9 291 54.0
Prupe.1G544500 Prunus persica HOM05D007884 ORTHO05D009968 2.3e-40 170.2 285 45.6
QL09p002129 Quercus lobata HOM05D007884 ORTHO05D009968 2.0e-39 167.2 295 36.3
Manes.18G118701 Manihot esculenta HOM05D007884 ORTHO05D009968 4.4e-39 166.0 287 56.8
Gohir.D07G090700 Gossypium hirsutum HOM05D007884 ORTHO05D009968 1.7e-38 164.1 289 52.2
Sabra19G0086300 Salix brachista HOM05D007884 ORTHO05D009968 2.2e-38 163.7 291 47.8
Gorai.001G097200 Gossypium raimondii HOM05D007884 ORTHO05D009968 2.8e-38 163.3 289 51.2
Gohir.A07G085300 Gossypium hirsutum HOM05D007884 ORTHO05D009968 3.7e-38 162.9 289 50.2
CSS0033652 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 4.8e-38 162.5 291 59.1
CSS0035845 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 4.8e-38 162.5 291 59.1
MD08G1213200 Malus domestica HOM05D007884 ORTHO05D009968 4.8e-38 162.5 285 61.8
Oeu023202.1 Olea europaea HOM05D007884 ORTHO05D009968 4.8e-38 162.5 290 60.7
Lj9P699T19 Lonicera japonica HOM05D007884 ORTHO05D009968 2.0e-36 157.1 292 55.5
TWI18G0215 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 5.9e-36 155.6 288 35.8
Potri.019G075900 Populus trichocarpa HOM05D007884 ORTHO05D009968 2.2e-35 153.7 291 36.1
Hma1.2p1_0004F.1_g003780 Hydrangea macrophylla HOM05D007884 ORTHO05D009968 3.8e-35 152.9 292 54.8
TWI75G0081 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 5.0e-35 152.5 289 64.4
TAR383G0946 Trochodendron aralioides HOM05D007884 ORTHO05D009968 1.9e-34 150.6 294 52.4
Psat1g062080 Pisum sativum HOM05D007884 ORTHO05D009968 8.8e-32 141.7 287 51.2
Sc26g0002320 Simmondsia chinensis HOM05D007884 ORTHO05D009968 1.5e-31 141.0 291 51.9
Nitab4.5_0005550g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 2.0e-31 140.6 284 53.5
Nn3g17503 Nelumbo nucifera HOM05D007884 ORTHO05D009968 3.4e-31 139.8 277 62.8
CANSAT25G3642 Cannabis sativa HOM05D007884 ORTHO05D009968 4.4e-31 139.4 287 40.1
Nitab4.5_0006974g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 5.7e-31 139.0 287 41.1
PGR031G2984 Punica granatum HOM05D007884 ORTHO05D009968 5.7e-31 139.0 281 45.2
EL10Ac1g01640 Beta vulgaris HOM05D007884 ORTHO05D009968 7.5e-31 138.7 283 54.1
Ca_26346_v3 Cicer arietinum L. HOM05D007884 ORTHO05D009968 9.8e-31 138.3 274 32.1
AUR62022398 Chenopodium quinoa HOM05D007884 ORTHO05D009968 1.7e-30 137.5 286 53.5
ClCG10G005030 Citrullus lanatus HOM05D007884 ORTHO05D009968 3.7e-30 136.3 291 51.2
Aqoxy7G02021 Aquilegia oxysepala HOM05D007884 ORTHO05D009968 4.8e-30 136.0 291 48.1
DCAR_014075 Daucus carota HOM05D007884 ORTHO05D009968 1.8e-29 134.0 285 47.7
Nn4g26038 Nelumbo nucifera HOM05D007884 ORTHO05D009968 1.8e-29 134.0 281 61.2
Migut.C01368 Erythranthe guttata HOM05D007884 ORTHO05D009968 3.1e-29 133.3 278 50.4
Lalb_Chr02g0158331 Lupinus albus HOM05D007884 ORTHO05D009968 3.1e-29 133.3 290 59.0
Lj2g0010779 Lotus japonicus HOM05D007884 ORTHO05D009968 5.4e-29 132.5 287 47.4
CAN.G63.2 Capsicum annuum HOM05D007884 ORTHO05D009968 1.2e-28 131.3 285 52.6
Ah.05g168770 Amaranthus hybridus HOM05D007884 ORTHO05D009968 1.7e-27 127.5 281 52.7
VMungo1309G1853 Vigna mungo HOM05D007884 ORTHO05D009968 1.7e-27 127.5 287 48.4
AUR62043537 Chenopodium quinoa HOM05D007884 ORTHO05D009968 2.3e-27 127.1 286 51.7
Sopen07g021970 Solanum pennellii HOM05D007884 ORTHO05D009968 6.6e-27 125.6 285 53.7
MELO3C016698.2 Cucumis melo HOM05D007884 ORTHO05D009968 8.6e-27 125.2 273 46.5
Eucgr.F02657 Eucalyptus grandis HOM05D007884 ORTHO05D009968 8.6e-27 125.2 285 54.7
Glyma.19G044700 Glycine max HOM05D007884 ORTHO05D009968 8.6e-27 125.2 287 48.4
MSTRG.1590 Avicennia marina HOM05D007884 ORTHO05D009968 1.5e-26 124.4 284 50.0
CsaV3_4G033680 Cucumis sativus L. HOM05D007884 ORTHO05D009968 1.5e-26 124.4 284 46.5
PGSC0003DMG400013578 Solanum tuberosum HOM05D007884 ORTHO05D009968 2.5e-26 123.6 285 51.2
Lsat_1_v5_gn_4_133080 Lactuca sativa HOM05D007884 ORTHO05D009968 4.2e-26 122.9 285 58.6
PSO242G0004 Papaver somniferum HOM05D007884 ORTHO05D009968 4.2e-26 122.9 289 54.3
Phvul.003G017800 Phaseolus vulgaris HOM05D007884 ORTHO05D009968 4.2e-26 122.9 287 48.1
Cc11_g04640 Coffea canephora HOM05D007884 ORTHO05D009968 7.2e-26 122.1 285 28.4
HanXRQChr17g0559001 Helianthus annuus HOM05D007884 ORTHO05D009968 7.2e-26 122.1 285 52.6
Medtr6g017035 Medicago truncatula HOM05D007884 ORTHO05D009968 6.1e-25 119.0 287 48.4
SGA_v2.0_scaffold118G32599 Striga asiatica HOM05D007884 ORTHO05D009968 1.8e-24 117.5 291 48.5
CDE04G2395 Ceratophyllum demersum HOM05D007884 ORTHO05D009968 7.5e-23 112.1 262 51.9
MBI04_g00944_MAGBIO Magnolia biondii HOM05D007884 ORTHO05D009968 6.3e-22 109.0 122 45.1
Sed0007017 Sechium edule HOM05D007884 ORTHO05D009968 1.1e-21 108.2 288 30.6
TPR.G21024 Trifolium pratense HOM05D007884 ORTHO05D009968 1.1e-21 108.2 284 54.9
ECA232G0955 Erigeron canadensis HOM05D007884 ORTHO05D009968 1.4e-21 107.8 285 55.4
HPP92_008446 Vanilla planifolia HOM05D007884 ORTHO05D009968 1.2e-20 104.8 290 54.1
FAN08G1312 Fragaria x ananassa HOM05D007884 ORTHO05D009968 3.9e-19 99.8 295 27.8
FvH4_5g33340 Fragaria vesca HOM05D007884 ORTHO05D009968 1.5e-18 97.8 295 27.5
FAN18G0070 Fragaria x ananassa HOM05D007884 ORTHO05D009968 1.5e-18 97.8 295 27.5
RcHm_v2.0_Chr7g0232061 Rosa chinensis HOM05D007884 ORTHO05D009968 3.3e-18 96.7 295 27.8
FAN04G3024 Fragaria x ananassa HOM05D007884 ORTHO05D009968 1.4e-16 91.3 295 28.1
Zm00001eb001440 Zea mays HOM05D007884 ORTHO05D009968 1.7e-14 84.3 287 25.4
HPP92_008463 Vanilla planifolia HOM05D007884 ORTHO05D009968 5.4e-13 79.3 290 45.2
ATR0716G085 Amborella trichopoda HOM05D007884 ORTHO05D009968 3.0e-11 73.6 284 53.2
Os03g0119700 Oryza sativa ssp. japonica HOM05D007884 ORTHO05D009968 9.5e-10 68.6 283 24.4
CAN.G6574.1 Capsicum annuum HOM05D007884 ORTHO05D009968 4.4e-07 59.7 239 48.1


User provided reference genes

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