Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 4.4e-153 544.7 287 100.0
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 2.0e-97 359.8 265 71.7
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 2.3e-93 346.3 284 65.5
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 6.6e-93 344.7 274 67.2
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 4.3e-92 342.0 271 67.5
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 4.5e-89 332.0 260 69.2
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 2.2e-88 329.7 295 64.1
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 6.4e-88 328.2 274 66.8
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 1.4e-87 327.0 266 67.3
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 2.4e-87 326.2 260 69.6
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 1.2e-86 323.9 280 64.6
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 3.5e-86 322.4 280 65.0
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 1.3e-85 320.5 266 64.3
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 9.6e-84 314.3 292 61.0
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 1.6e-83 313.5 283 61.5
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 2.4e-82 309.7 284 62.3
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 5.8e-81 305.1 258 62.8
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 7.6e-81 304.7 267 59.9
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 9.9e-81 304.3 258 62.4
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 9.9e-81 304.3 258 62.8
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 9.9e-81 304.3 251 65.3
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 1.3e-80 303.9 255 62.7
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 2.9e-80 302.8 255 62.4
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 6.4e-80 301.6 275 57.8
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 8.4e-80 301.2 258 62.0
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 8.4e-80 301.2 258 62.0
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 8.4e-80 301.2 258 62.0
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 1.1e-79 300.8 258 61.2
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 1.1e-79 300.8 258 62.4
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 1.4e-79 300.4 258 62.8
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 3.2e-79 299.3 268 61.2
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 4.2e-79 298.9 259 61.0
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 5.5e-79 298.5 250 62.8
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 7.1e-79 298.1 256 61.3
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 9.3e-79 297.7 250 61.6
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 1.2e-78 297.4 256 63.7
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 7.9e-78 294.7 265 61.1
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 1.3e-77 293.9 265 60.4
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 1.8e-77 293.5 261 62.8
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 5.1e-77 292.0 263 59.7
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 1.1e-76 290.8 250 64.4
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 2.1e-75 286.6 248 61.7
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 3.7e-75 285.8 304 54.6
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 1.4e-74 283.9 285 55.4
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 2.6e-73 279.6 218 67.4
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 4.5e-73 278.9 264 57.6
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 3.8e-72 275.8 214 69.2
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 6.5e-72 275.0 258 57.8
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 1.2e-70 270.8 209 67.0
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 2.7e-70 269.6 236 62.3
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 3.5e-70 269.2 286 55.2
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 1.3e-69 267.3 279 56.6
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 6.7e-69 265.0 211 65.9
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 2.2e-64 250.0 249 54.6
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 6.5e-64 248.4 208 59.6
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 4.2e-63 245.7 216 59.3
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 6.3e-59 231.9 248 53.2
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 8.2e-59 231.5 210 56.2
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 1.6e-54 217.2 204 54.9
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 1.3e-51 207.6 297 41.8
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 1.2e-46 191.0 186 58.1
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 1.6e-46 190.7 268 39.9
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 8.2e-43 178.3 261 39.8
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 1.3e-40 171.0 262 44.7
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 9.7e-36 154.8 129 63.6
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 4.1e-34 149.4 101 77.2
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 5.5e-31 139.0 107 68.2
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 8.0e-30 135.2 124 57.3
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 1.3e-27 127.9 111 63.1
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 1.7e-24 117.5 105 61.9
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 2.9e-24 116.7 254 31.9
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 8.6e-24 115.2 99 65.7
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 9.2e-18 95.1 114 51.8
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 1.7e-11 74.3 150 37.3
MBI03_g48045_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 1.6e-06 57.8 58 53.4
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 1.6e-06 57.8 117 35.9


User provided reference genes

Program Settings