Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 8.2e-129 463.8 241 100.0
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 1.5e-82 310.1 241 71.0
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 1.3e-81 307.0 251 69.3
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 2.2e-81 306.2 243 69.1
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 3.0e-78 295.8 251 66.9
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 3.3e-77 292.4 248 64.9
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 2.4e-75 286.2 242 63.6
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 2.4e-75 286.2 246 65.4
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 1.5e-74 283.5 236 64.8
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 2.6e-74 282.7 244 65.2
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 7.6e-74 281.2 241 66.4
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.3e-73 280.4 236 64.4
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 2.9e-73 279.3 245 63.3
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 3.8e-73 278.9 221 67.9
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 7.1e-72 274.6 239 64.0
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.1e-71 273.1 213 69.5
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 3.5e-71 272.3 239 61.1
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.7e-70 270.0 240 60.8
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.3e-70 269.6 240 61.2
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 3.9e-70 268.9 245 63.7
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 6.6e-70 268.1 240 60.4
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 8.7e-70 267.7 240 58.8
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 8.7e-70 267.7 240 60.8
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 8.7e-70 267.7 239 62.3
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 1.1e-69 267.3 238 60.5
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 1.6e-68 263.5 242 59.5
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 2.1e-68 263.1 244 58.2
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 6.2e-68 261.5 248 60.5
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 1.8e-67 260.0 248 60.9
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 3.1e-67 259.2 225 62.2
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 6.9e-67 258.1 228 59.6
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 2.0e-66 256.5 250 61.2
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 5.8e-66 255.0 233 59.2
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 3.8e-65 252.3 239 60.3
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 1.1e-64 250.8 238 59.2
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 1.4e-64 250.4 231 59.7
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 4.2e-64 248.8 240 56.7
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 5.4e-64 248.4 211 63.0
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 4.6e-63 245.4 233 62.7
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 1.0e-62 244.2 248 58.1
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 1.7e-62 243.4 250 58.4
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 5.1e-62 241.9 247 56.3
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 6.6e-62 241.5 250 57.2
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 8.7e-62 241.1 238 55.9
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 8.7e-62 241.1 257 57.6
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 1.1e-61 240.7 243 56.4
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 1.1e-61 240.7 234 54.7
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 1.5e-61 240.4 240 57.9
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 3.3e-61 239.2 243 55.6
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 5.6e-61 238.4 208 60.1
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 7.4e-61 238.0 226 56.6
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 9.6e-61 237.7 244 58.2
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.6e-60 236.9 256 55.5
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 2.8e-60 236.1 254 55.9
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 3.6e-60 235.7 242 54.1
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 3.6e-60 235.7 243 53.1
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 4.8e-60 235.3 241 57.7
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 6.2e-60 235.0 230 58.3
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 6.2e-60 235.0 242 57.0
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 8.1e-60 234.6 221 58.4
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 1.4e-59 233.8 239 56.9
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 1.4e-59 233.8 236 57.6
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 5.3e-59 231.9 237 54.4
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 1.5e-58 230.3 244 53.3
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 3.4e-58 229.2 242 52.1
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 3.4e-58 229.2 231 58.0
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 1.7e-57 226.9 196 62.8
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 2.2e-57 226.5 243 51.9
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 2.2e-57 226.5 243 51.9
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 2.9e-57 226.1 236 54.7
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 8.4e-57 224.6 228 54.4
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 4.2e-56 222.2 242 51.7
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 9.3e-56 221.1 224 55.4
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 1.6e-55 220.3 248 51.6
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 3.5e-55 219.2 240 50.4
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 4.6e-55 218.8 240 50.8
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 1.3e-54 217.2 208 55.8
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 1.3e-54 217.2 222 53.2
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 2.3e-54 216.5 243 53.5
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 2.3e-54 216.5 210 59.0
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 2.3e-54 216.5 219 54.8
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 5.1e-54 215.3 249 51.0
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 6.7e-54 214.9 219 51.1
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 1.9e-53 213.4 223 52.5
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 2.5e-53 213.0 246 52.4
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 3.3e-53 212.6 226 51.3
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 5.6e-53 211.8 243 53.1
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 1.3e-52 210.7 246 51.2
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 8.1e-52 208.0 200 55.0
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 1.1e-51 207.6 243 53.1
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 1.4e-51 207.2 229 51.1
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 5.3e-51 205.3 243 53.1
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 1.2e-50 204.1 250 51.6
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 1.5e-50 203.8 250 51.6
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 1.5e-50 203.8 250 51.6
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 2.6e-50 203.0 237 51.9
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 5.8e-50 201.8 250 51.2
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 1.0e-49 201.1 221 53.8
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 2.2e-49 199.9 228 52.6
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 1.4e-48 197.2 222 51.8
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 3.2e-48 196.1 270 48.1
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 3.5e-47 192.6 241 46.1
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 1.8e-46 190.3 210 52.9
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 8.7e-46 188.0 240 47.9
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 2.5e-45 186.4 243 44.0
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 3.3e-45 186.0 202 54.5
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 4.3e-45 185.7 250 49.2
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 3.7e-44 182.6 187 56.7
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 3.1e-43 179.5 192 52.6
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 3.1e-43 179.5 278 43.5
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 3.4e-42 176.0 188 53.7
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 5.9e-42 175.3 188 53.7
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 1.3e-41 174.1 186 53.8
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 1.3e-41 174.1 283 43.8
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 1.7e-41 173.7 188 52.7
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 2.2e-41 173.3 188 52.7
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 1.4e-40 170.6 201 53.2
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 2.5e-37 159.8 178 53.4
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 6.9e-35 151.8 209 43.1
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 2.2e-33 146.7 246 39.4
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.1e-32 144.4 231 46.3
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 1.4e-32 144.1 146 55.5
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 2.6e-26 123.2 232 40.5
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 6.5e-25 118.6 229 33.2
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 2.8e-20 103.2 95 57.9
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 1.4e-19 100.9 154 41.6
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 3.6e-15 86.3 111 47.7
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 4.1e-11 72.8 170 33.5
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 1.0e-06 58.2 204 28.9
AagrBONN_evm.TU.Sc2ySwM_295.7 Anthoceros agrestis HOM05D024008 ORTHO05D007487 4.0e-06 56.2 172 29.1


User provided reference genes

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