Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 5.4e-262 907.1 466 100.0
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 2.8e-197 692.2 424 76.7
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 5.2e-196 688.0 429 76.2
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 5.2e-196 688.0 428 76.2
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 2.6e-195 685.6 424 76.9
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 4.4e-195 684.9 430 74.9
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 7.5e-195 684.1 424 75.0
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 3.7e-194 681.8 420 75.0
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 6.3e-194 681.0 424 75.9
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 1.8e-193 679.5 424 75.5
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 2.3e-191 672.5 430 73.5
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 3.9e-191 671.8 430 74.7
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 8.6e-191 670.6 424 74.3
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 5.6e-190 667.9 430 71.6
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 7.3e-190 667.5 430 72.6
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 8.0e-189 664.1 430 73.0
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 5.2e-188 661.4 430 72.8
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 2.6e-187 659.1 429 72.3
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 2.2e-186 656.0 435 72.4
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 4.9e-186 654.8 431 72.9
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 6.4e-186 654.4 466 67.6
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 8.3e-186 654.1 433 71.6
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 1.9e-185 652.9 424 73.1
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 2.0e-184 649.4 396 76.0
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 6.6e-183 644.4 421 72.2
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 1.5e-182 643.3 427 70.7
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.2e-181 640.2 424 71.2
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 1.6e-181 639.8 421 70.1
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.6e-181 639.8 406 72.9
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 3.6e-181 638.6 458 67.2
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 4.7e-181 638.3 421 69.8
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 1.4e-180 636.7 425 70.6
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 1.8e-180 636.3 459 66.4
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 2.3e-180 636.0 431 69.1
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.0e-180 635.2 406 72.7
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 8.9e-180 634.0 399 73.9
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 1.5e-179 633.3 424 71.0
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 2.0e-179 632.9 421 71.0
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 4.9e-178 628.2 408 72.1
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 1.9e-177 626.3 422 69.9
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 4.1e-177 625.2 434 67.1
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 5.4e-177 624.8 460 68.7
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 5.4e-177 624.8 466 67.8
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 1.2e-176 623.6 434 68.9
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 2.7e-176 622.5 430 68.6
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 2.7e-176 622.5 434 67.1
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 3.5e-176 622.1 422 70.6
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 4.6e-176 621.7 426 69.0
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 7.8e-176 620.9 425 67.1
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 5.1e-175 618.2 435 67.8
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 5.6e-174 614.8 434 66.4
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 7.3e-174 614.4 424 67.5
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 2.1e-173 612.8 432 66.4
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 2.9e-170 602.4 425 65.4
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 3.7e-170 602.1 425 66.8
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 6.4e-170 601.3 432 65.3
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 8.3e-170 600.9 430 66.3
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 1.1e-169 600.5 431 66.1
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 2.4e-169 599.4 398 71.4
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 1.2e-168 597.0 429 65.3
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 1.2e-168 597.0 429 65.3
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 4.6e-168 595.1 425 64.9
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.0e-167 594.0 396 68.4
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 1.3e-167 593.6 429 65.0
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 3.3e-166 589.0 416 67.3
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 4.3e-166 588.6 433 62.8
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 1.1e-164 583.9 397 67.5
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.1e-164 583.9 399 70.2
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 2.6e-163 579.3 397 66.8
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 2.2e-162 576.2 430 65.1
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.4e-161 573.5 424 65.3
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 1.6e-160 570.1 437 62.9
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 2.1e-157 559.7 442 62.2
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 1.1e-153 547.4 441 64.4
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 3.3e-150 535.8 430 61.6
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 1.8e-148 530.0 424 62.3
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 9.0e-148 527.7 333 76.0
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.5e-147 526.9 405 61.5
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 6.4e-146 521.5 428 58.4
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.6e-144 516.9 416 63.7
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 3.5e-144 515.8 334 72.5
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 1.8e-143 513.5 399 62.4
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 3.0e-143 512.7 352 70.2
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 5.1e-143 511.9 356 70.8
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.6e-142 507.7 403 64.0
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 1.3e-141 507.3 391 59.6
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 1.0e-138 497.7 402 58.7
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.6e-136 488.8 382 64.4
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 7.4e-134 481.5 323 66.9
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 3.7e-133 479.2 398 56.5
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 1.3e-130 470.7 338 66.3
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 2.3e-127 459.9 338 65.7
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 2.9e-114 416.4 409 48.7
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.7e-101 374.0 225 75.1
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 6.3e-93 345.5 224 70.5
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 1.6e-80 304.3 198 71.2
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 4.4e-78 296.2 240 61.7
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 1.4e-68 264.6 224 60.3
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 1.5e-57 228.0 383 36.3
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 3.3e-57 226.9 164 65.2
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.3e-53 214.9 130 78.5
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.3e-53 214.9 130 78.5
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 3.8e-45 186.8 387 33.3
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 3.3e-41 173.7 133 60.9
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.9e-38 162.2 174 52.9
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.9e-38 162.2 174 52.9
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 3.2e-36 157.1 161 50.3
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 6.6e-34 149.4 99 67.7
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 7.1e-28 129.4 70 87.1
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 5.3e-23 113.2 76 71.1
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 3.2e-20 104.0 63 71.4
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 5.1e-18 96.7 531 22.4
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 6.3e-16 89.7 217 31.3
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 1.5e-14 85.1 198 31.3
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 4.6e-11 73.6 75 46.7
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 3.9e-10 70.5 99 40.4
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 2.0e-06 58.2 77 39.0


User provided reference genes

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