Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 2.8e-202 708.4 348 100.0
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 6.2e-162 574.3 344 80.8
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 6.5e-159 564.3 346 77.7
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 2.3e-156 555.8 347 76.7
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 5.1e-156 554.7 346 76.3
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 4.3e-155 551.6 345 76.5
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 1.1e-153 547.0 345 75.9
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.8e-153 546.2 345 75.7
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 1.2e-152 543.5 345 75.4
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 2.0e-152 542.7 347 77.2
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 2.6e-152 542.3 338 77.5
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 3.8e-151 538.5 345 75.9
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 3.8e-151 538.5 346 74.3
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 3.8e-151 538.5 338 76.6
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 6.5e-151 537.7 344 75.6
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 8.5e-151 537.3 346 74.0
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 8.5e-151 537.3 344 75.3
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 3.2e-150 535.4 346 74.3
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 1.6e-149 533.1 337 74.5
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 2.1e-149 532.7 346 74.0
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 3.6e-149 531.9 346 74.3
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 4.6e-149 531.6 347 74.6
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 1.0e-148 530.4 349 73.9
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 2.3e-148 529.3 346 76.0
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 2.3e-148 529.3 348 74.1
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 5.1e-148 528.1 350 73.4
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 1.5e-147 526.6 348 73.0
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 2.5e-147 525.8 344 74.1
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 3.3e-147 525.4 337 75.4
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 4.3e-147 525.0 348 72.7
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 4.3e-147 525.0 348 72.1
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 5.7e-147 524.6 344 72.7
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 9.7e-147 523.9 347 72.3
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 1.3e-146 523.5 338 72.2
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 8.2e-146 520.8 347 73.5
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 1.8e-145 519.6 347 72.9
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 1.8e-145 519.6 344 72.7
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 6.9e-145 517.7 346 73.1
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 1.2e-144 516.9 347 70.6
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 2.0e-144 516.2 347 73.8
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 2.6e-144 515.8 336 71.7
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 3.4e-144 515.4 347 72.3
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 3.4e-144 515.4 342 73.4
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 7.7e-144 514.2 346 72.5
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 7.7e-144 514.2 346 72.5
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 7.7e-144 514.2 349 72.8
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 1.3e-143 513.5 347 70.3
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 1.7e-143 513.1 348 73.3
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 5.0e-143 511.5 346 72.0
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 5.0e-143 511.5 346 71.4
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 6.5e-143 511.1 334 72.5
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 1.1e-142 510.4 349 72.2
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 1.4e-142 510.0 339 74.0
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 2.5e-142 509.2 374 68.4
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 2.5e-142 509.2 367 68.1
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 4.2e-142 508.4 348 71.0
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 5.5e-142 508.1 344 70.9
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 1.2e-141 506.9 346 69.4
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 2.1e-141 506.1 351 72.4
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 4.7e-141 505.0 379 67.3
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 4.7e-141 505.0 344 70.1
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 3.9e-140 501.9 348 70.1
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 6.7e-140 501.1 349 72.5
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 6.7e-140 501.1 345 69.0
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 7.4e-139 497.7 346 69.1
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 9.7e-139 497.3 345 70.7
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 3.7e-138 495.4 347 70.9
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 1.4e-137 493.4 348 70.1
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 3.1e-137 492.3 346 70.8
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 4.1e-137 491.9 352 67.0
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 4.1e-137 491.9 352 67.0
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 1.5e-136 490.0 349 69.1
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 1.5e-136 490.0 349 69.1
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 2.6e-136 489.2 406 61.8
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 3.5e-136 488.8 349 69.1
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 1.0e-135 487.3 340 72.6
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 2.9e-135 485.7 340 70.6
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 2.9e-135 485.7 353 68.0
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 5.0e-135 485.0 352 69.3
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 6.5e-135 484.6 338 68.9
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 8.5e-135 484.2 345 69.0
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 1.5e-134 483.4 328 70.7
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 3.2e-134 482.3 351 68.9
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 4.2e-134 481.9 343 69.1
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 4.7e-133 478.4 329 71.1
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 1.4e-132 476.9 352 67.9
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 2.3e-132 476.1 348 67.5
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 1.5e-131 473.4 353 66.9
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 2.6e-131 472.6 344 66.9
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 2.6e-131 472.6 303 75.6
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 2.6e-131 472.6 348 67.2
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 4.4e-131 471.9 346 66.5
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 9.7e-131 470.7 347 66.6
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 4.8e-130 468.4 332 69.6
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 4.8e-130 468.4 292 74.7
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 8.2e-130 467.6 343 67.6
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 2.0e-128 463.0 348 64.9
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 7.7e-128 461.1 282 77.7
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 1.5e-126 456.8 342 64.9
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 2.3e-124 449.5 335 63.6
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 9.8e-123 444.1 338 65.7
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 2.7e-117 426.0 325 65.5
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 8.0e-117 424.5 234 82.1
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 7.7e-112 407.9 257 73.9
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 3.8e-111 405.6 250 72.4
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 1.9e-110 403.3 250 72.0
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 1.8e-108 396.7 250 78.8
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 1.9e-102 376.7 304 60.9
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 5.6e-102 375.2 330 58.5
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 2.1e-101 373.2 325 61.5
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 6.0e-96 355.1 234 71.8
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 3.0e-95 352.8 328 55.2
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 2.3e-92 343.2 242 71.5
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 2.3e-92 343.2 242 71.5
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 4.0e-92 342.4 244 71.3
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 2.9e-90 336.3 238 69.7
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 1.7e-87 327.0 243 66.7
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 2.1e-85 320.1 325 51.4
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 5.2e-84 315.5 247 59.9
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 4.4e-67 259.2 175 70.9
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 6.6e-63 245.4 248 49.2
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.3e-61 241.1 163 69.3
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 7.6e-59 231.9 191 59.7
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 6.4e-58 228.8 191 59.7
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 1.8e-52 210.7 199 51.3
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 2.6e-51 206.8 177 59.3
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 6.7e-47 192.2 173 59.5
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 4.5e-27 126.3 73 79.5
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 1.3e-26 124.8 79 74.7
CDE04G1521 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 2.9e-18 97.1 57 70.2
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 2.9e-10 70.5 53 64.2


User provided reference genes

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