Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.1710 Acer truncatum HOM05D003899 ORTHO05D003655 4.6e-28 128.6 177 100.0
Thecc.08G144600 Theobroma cacao HOM05D003899 ORTHO05D003655 1.2e-12 77.4 89 67.4
Duzib093G0910 Durio zibethinus HOM05D003899 ORTHO05D003655 7.9e-12 74.7 89 49.4
Dinv41123 Davidia involucrata HOM05D000043 ORTHO05D002577 1.0e-11 74.3 87 50.6
Dinv25809 Davidia involucrata HOM05D003899 ORTHO05D003655 3.9e-11 72.4 73 52.1
Nn1g06205 Nelumbo nucifera HOM05D003899 ORTHO05D003655 6.7e-11 71.6 88 47.7
Duzib041G0166 Durio zibethinus HOM05D003899 ORTHO05D003655 4.3e-10 68.9 83 56.6
Manes.18G087500 Manihot esculenta HOM05D003899 ORTHO05D003655 7.4e-10 68.2 88 50.0
TAR381G0487 Trochodendron aralioides HOM05D003899 ORTHO05D003655 9.7e-10 67.8 88 47.7
CSS0023777 Camellia sinensis var. sinensis HOM05D003899 ORTHO05D003655 2.8e-09 66.2 78 47.4
Potri.002G072000 Populus trichocarpa HOM05D003899 ORTHO05D003655 3.7e-09 65.9 91 64.8
TWI32G0122 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 1.4e-08 63.9 37 73.0
COL.COLO4_08943 Corchorus olitorius HOM05D003899 ORTHO05D003655 2.4e-08 63.2 95 47.4
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 2.4e-08 63.2 89 46.1
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 3.1e-08 62.8 88 45.5
Cfa018365 Carpinus fangiana HOM05D003899 ORTHO05D003655 4.1e-08 62.4 88 43.2
FvH4_2g14670 Fragaria vesca HOM05D003899 ORTHO05D003655 4.1e-08 62.4 37 67.6
FAN15G3500 Fragaria x ananassa HOM05D003899 ORTHO05D003655 4.1e-08 62.4 37 67.6
FAN20G0153 Fragaria x ananassa HOM05D003899 ORTHO05D003655 4.1e-08 62.4 37 67.6
FAN24G0119 Fragaria x ananassa HOM05D003899 ORTHO05D003655 4.1e-08 62.4 37 67.6
CiPaw.16G017800 Carya illinoinensis HOM05D003899 ORTHO05D003655 9.0e-08 61.2 91 45.1
MBI06_g43012_MAGBIO Magnolia biondii HOM05D003899 ORTHO05D003655 9.0e-08 61.2 86 45.3
Gohir.D02G072400 Gossypium hirsutum HOM05D003899 ORTHO05D003655 1.2e-07 60.8 90 46.7
Gorai.005G081600 Gossypium raimondii HOM05D003899 ORTHO05D003655 1.2e-07 60.8 90 46.7
RcHm_v2.0_Chr6g0277141 Rosa chinensis HOM05D003899 ORTHO05D003655 1.2e-07 60.8 37 64.9
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 1.5e-07 60.5 86 39.5
TWI60G1060 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 1.5e-07 60.5 85 44.7
Oeu030532.1 Olea europaea HOM05D003899 ORTHO05D003655 2.0e-07 60.1 78 42.3
Prupe.8G018800 Prunus persica HOM05D003899 ORTHO05D003655 4.5e-07 58.9 37 64.9
Nitab4.5_0015327g0010 Nicotiana tabacum HOM05D003899 ORTHO05D003655 5.9e-07 58.5 75 46.7
ClCG08G006450 Citrullus lanatus HOM05D000058 ORTHO05D000077 7.7e-07 58.2 84 39.3
MD05G1014900 Malus domestica HOM05D003899 ORTHO05D003655 7.7e-07 58.2 37 64.9
Nn5g28622 Nelumbo nucifera HOM05D003899 ORTHO05D003655 7.7e-07 58.2 86 36.0
Lj2C604T4 Lonicera japonica HOM05D003899 ORTHO05D003655 1.3e-06 57.4 77 39.0
Aqoxy3G00817 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 2.2e-06 56.6 92 38.0
Rhsim10G0136200 Rhododendron simsii HOM05D003899 ORTHO05D003655 2.2e-06 56.6 36 61.1
RhsimUnG0132700 Rhododendron simsii HOM05D003899 ORTHO05D003655 2.2e-06 56.6 36 61.1
MD10G1014900 Malus domestica HOM05D003899 ORTHO05D003655 2.9e-06 56.2 37 62.2
Potri.005G060700 Populus trichocarpa HOM05D003899 ORTHO05D003655 2.9e-06 56.2 89 40.4
PGR002G0009 Punica granatum HOM05D003899 ORTHO05D003655 2.9e-06 56.2 37 62.2
PGR044G0858 Punica granatum HOM05D003899 ORTHO05D003655 2.9e-06 56.2 37 62.2
Potri.007G108100 Populus trichocarpa HOM05D003899 ORTHO05D003655 3.8e-06 55.8 89 40.4
Thecc.01G128000 Theobroma cacao HOM05D003899 ORTHO05D003655 3.8e-06 55.8 87 37.9
DCAR_001362 Daucus carota HOM05D003899 ORTHO05D003655 5.0e-06 55.5 85 40.0
CANSAT25G0207 Cannabis sativa HOM05D003899 ORTHO05D003655 6.5e-06 55.1 88 40.9
CiPaw.15G021500 Carya illinoinensis HOM05D003899 ORTHO05D003655 6.5e-06 55.1 83 42.2
MELO3C027328.2 Cucumis melo HOM05D003899 ORTHO05D003655 6.5e-06 55.1 38 63.2
CsaV3_6G030980 Cucumis sativus L. HOM05D003899 ORTHO05D003655 6.5e-06 55.1 38 63.2
Lj2C604T3 Lonicera japonica HOM05D003899 ORTHO05D003655 6.5e-06 55.1 77 37.7
Nitab4.5_0002974g0030 Nicotiana tabacum HOM05D003899 ORTHO05D003655 6.5e-06 55.1 75 44.0
QL06p029227 Quercus lobata HOM05D003899 ORTHO05D003655 6.5e-06 55.1 83 56.6
THA.LOC104806849 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 6.5e-06 55.1 36 63.9
Sabra07G0088500 Salix brachista HOM05D000850 ORTHO05D000266 8.5e-06 54.7 89 40.4


User provided reference genes

Program Settings