Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 5.8e-132 474.2 228 100.0
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 5.8e-108 394.4 232 81.5
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 3.8e-107 391.7 220 85.5
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 7.1e-106 387.5 220 84.5
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 7.1e-106 387.5 220 85.0
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 7.1e-106 387.5 220 85.0
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 9.3e-106 387.1 220 84.5
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 4.6e-105 384.8 220 84.5
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 4.6e-105 384.8 217 85.3
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 1.0e-104 383.6 220 84.1
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 1.3e-104 383.3 220 84.1
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 3.0e-104 382.1 220 82.7
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 5.1e-104 381.3 218 84.9
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 6.6e-104 380.9 221 82.4
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 8.7e-104 380.6 220 82.7
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 1.9e-103 379.4 220 82.3
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 1.9e-103 379.4 220 83.6
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 2.5e-103 379.0 218 81.7
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 3.3e-103 378.6 221 82.8
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 4.3e-103 378.3 220 80.9
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 4.3e-103 378.3 220 81.8
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 4.3e-103 378.3 220 83.2
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 7.3e-103 377.5 220 80.9
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 7.3e-103 377.5 220 80.9
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 1.3e-102 376.7 233 79.4
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 2.1e-102 375.9 220 80.9
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 2.8e-102 375.6 219 80.8
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 2.8e-102 375.6 219 80.8
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 2.8e-102 375.6 218 81.7
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 4.8e-102 374.8 220 81.8
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.4e-101 373.2 221 81.0
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 1.8e-101 372.9 220 80.9
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 4.0e-101 371.7 220 80.0
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 4.0e-101 371.7 220 80.5
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 5.3e-101 371.3 220 80.9
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 5.3e-101 371.3 221 80.5
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 6.9e-101 370.9 220 80.0
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 9.0e-101 370.5 218 81.7
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 9.0e-101 370.5 218 81.7
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 9.0e-101 370.5 218 81.7
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 1.2e-100 370.2 220 80.0
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 1.2e-100 370.2 220 80.5
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 3.4e-100 368.6 220 80.0
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 4.5e-100 368.2 218 78.9
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 4.5e-100 368.2 221 80.1
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 1.3e-99 366.7 218 79.8
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 1.7e-99 366.3 221 80.5
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 1.7e-99 366.3 218 80.7
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 2.9e-99 365.5 220 79.5
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 6.4e-99 364.4 220 79.1
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 8.4e-99 364.0 222 78.4
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 8.4e-99 364.0 217 79.7
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 8.4e-99 364.0 218 78.9
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 1.4e-98 363.2 219 79.5
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 2.4e-98 362.5 218 80.3
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 5.4e-98 361.3 218 77.5
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 7.1e-98 360.9 211 81.0
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.6e-97 359.8 220 78.2
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 1.6e-97 359.8 220 78.6
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 4.6e-97 358.2 220 77.7
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 6.0e-97 357.8 220 79.1
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 1.0e-96 357.1 220 77.7
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 1.0e-96 357.1 220 78.6
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 1.8e-96 356.3 220 74.5
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 3.0e-96 355.5 220 75.9
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 3.9e-96 355.1 218 78.0
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 3.9e-96 355.1 218 77.1
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 3.9e-96 355.1 218 77.1
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 3.9e-96 355.1 220 76.8
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 7.4e-95 350.9 220 76.8
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 1.3e-94 350.1 220 76.4
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 1.1e-93 347.1 220 74.1
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 1.4e-93 346.7 217 77.4
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 2.4e-93 345.9 200 81.5
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 3.1e-93 345.5 220 75.9
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 3.1e-93 345.5 217 75.1
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 2.0e-92 342.8 198 81.8
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 3.4e-92 342.0 236 71.6
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 3.4e-92 342.0 236 71.6
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 4.5e-92 341.7 220 76.4
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 1.0e-91 340.5 217 73.3
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 2.2e-91 339.3 233 72.1
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 2.2e-91 339.3 218 72.9
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 2.2e-91 339.3 220 73.6
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 2.5e-90 335.9 200 79.5
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 2.5e-90 335.9 217 72.4
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 5.5e-90 334.7 217 71.9
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 1.8e-88 329.7 233 67.4
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 9.6e-87 323.9 217 72.8
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 6.2e-86 321.2 220 70.9
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 4.0e-85 318.5 208 73.1
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 7.6e-84 314.3 233 64.4
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 2.2e-83 312.8 220 71.8
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 2.2e-83 312.8 233 63.9
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 1.8e-80 303.1 202 74.3
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 2.5e-79 299.3 220 67.7
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 1.1e-77 293.9 217 65.0
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 1.0e-75 287.3 218 62.8
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 1.9e-74 283.1 219 62.1
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 3.3e-71 272.3 220 63.6
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 1.8e-69 266.5 227 55.5
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 3.2e-66 255.8 218 54.6
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 3.3e-63 245.7 186 67.2
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 4.4e-63 245.4 168 69.6
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.6e-60 236.1 122 88.5
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 1.2e-57 227.3 144 79.2
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 1.6e-52 210.3 229 48.5
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 2.0e-52 209.9 132 78.0
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 1.2e-31 141.0 78 89.7
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 1.3e-27 127.5 220 38.2
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 5.6e-26 122.1 127 53.5
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 7.3e-26 121.7 255 31.8
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 4.7e-25 119.0 60 85.0
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 5.2e-24 115.5 111 60.4
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 3.4e-23 112.8 185 37.3
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.2e-20 104.4 58 81.0
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 8.6e-11 71.6 62 59.7
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 2.3e-08 63.5 36 72.2
Rhsim11G0068700 Rhododendron simsii HOM05D006264 ORTHO05D007739 2.0e-07 60.5 45 71.1
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 5.8e-07 58.9 41 61.0
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 7.6e-07 58.5 33 72.7


User provided reference genes

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