Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 2.2e-177 625.5 321 100.0
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 5.8e-141 504.6 258 100.0
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 1.5e-120 436.8 258 85.3
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 8.4e-116 421.0 261 78.5
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 3.9e-113 412.1 258 80.6
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 3.3e-112 409.1 257 77.8
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 9.6e-112 407.5 256 79.7
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.6e-111 406.8 269 75.8
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 6.2e-111 404.8 257 77.0
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.8e-110 403.3 269 75.1
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 9.0e-110 401.0 269 75.1
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 9.0e-110 401.0 253 78.3
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 5.8e-109 398.3 257 75.1
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 1.0e-108 397.5 260 76.2
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 2.9e-108 396.0 254 78.3
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 2.9e-108 396.0 257 77.0
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 3.2e-107 392.5 275 74.2
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 3.2e-107 392.5 257 74.7
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 4.2e-107 392.1 257 76.7
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 4.2e-107 392.1 257 76.7
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 9.3e-107 391.0 269 71.7
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.6e-106 390.2 257 75.1
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.6e-106 390.2 257 75.1
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 2.1e-106 389.8 257 75.5
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 3.5e-106 389.0 248 77.4
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 4.6e-106 388.7 269 71.4
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 6.0e-106 388.3 265 73.6
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 1.3e-105 387.1 257 74.7
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 2.3e-105 386.3 254 74.8
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 3.0e-105 386.0 257 76.3
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 3.9e-105 385.6 269 71.4
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 5.1e-105 385.2 327 63.9
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 5.1e-105 385.2 259 76.1
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 8.7e-105 384.4 265 72.8
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.5e-104 383.6 257 75.1
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 1.5e-104 383.6 257 76.3
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.5e-104 383.6 257 76.3
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 2.5e-104 382.9 256 74.2
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 9.6e-104 380.9 254 74.0
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 9.6e-104 380.9 269 71.4
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 1.3e-103 380.6 253 74.3
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 2.1e-103 379.8 254 74.0
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 2.8e-103 379.4 264 72.0
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 3.7e-103 379.0 254 73.6
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.1e-102 377.5 254 73.2
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 9.0e-102 374.4 254 72.8
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 2.0e-101 373.2 267 70.8
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 5.9e-101 371.7 254 72.4
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 6.5e-100 368.2 254 72.0
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 6.5e-100 368.2 254 72.0
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 3.2e-99 365.9 254 71.7
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 5.5e-99 365.2 254 71.7
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 1.2e-98 364.0 265 70.6
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 2.1e-98 363.2 257 70.4
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 2.7e-98 362.8 259 71.8
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 3.5e-98 362.5 263 69.6
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 3.5e-98 362.5 263 70.3
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 1.3e-97 360.5 267 70.4
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 2.3e-97 359.8 260 70.8
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 8.7e-97 357.8 261 71.6
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 1.9e-96 356.7 255 72.2
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 1.9e-96 356.7 262 71.8
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 3.3e-96 355.9 258 67.8
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 1.3e-95 354.0 254 70.9
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 3.7e-95 352.4 255 69.4
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 8.2e-95 351.3 263 68.8
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 8.2e-95 351.3 263 66.2
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 8.2e-95 351.3 268 69.0
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 8.2e-95 351.3 261 69.7
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 1.1e-94 350.9 264 69.3
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 3.1e-94 349.4 257 68.1
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 4.1e-94 349.0 263 68.4
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 4.1e-94 349.0 265 66.8
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 9.0e-94 347.8 262 68.3
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 9.0e-94 347.8 261 69.0
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 3.8e-92 342.4 275 68.4
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 6.5e-92 341.7 271 69.4
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 6.5e-92 341.7 271 69.4
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 1.9e-91 340.1 254 68.5
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 7.2e-91 338.2 265 69.8
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 7.2e-91 338.2 258 64.7
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 1.6e-90 337.0 257 66.5
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 3.6e-90 335.9 257 66.1
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 4.6e-90 335.5 257 66.5
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 6.1e-90 335.1 265 67.5
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 1.8e-89 333.6 271 67.2
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 1.5e-88 330.5 271 67.2
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 2.0e-80 303.5 257 59.5
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 2.6e-72 276.6 257 57.6
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 2.8e-71 273.1 169 79.3
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 6.3e-71 271.9 173 77.5
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 4.1e-70 269.2 187 70.6
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 2.9e-68 263.1 161 78.9
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 1.6e-66 257.3 169 74.0
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 3.1e-62 243.0 167 73.7
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.7e-60 237.3 137 81.0
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 1.9e-59 233.8 168 70.2
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 1.2e-58 231.1 266 46.2
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 1.2e-56 224.6 258 49.2
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 2.6e-56 223.4 169 69.8
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 9.8e-56 221.5 151 72.2
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 9.2e-54 214.9 264 48.5
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 1.2e-53 214.5 265 47.9
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 1.4e-46 191.0 268 45.5
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 2.4e-46 190.3 206 49.5
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 5.6e-43 179.1 257 43.6
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 9.2e-38 161.8 265 41.1
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 3.1e-33 146.7 134 61.2
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 7.8e-29 132.1 78 78.2
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 5.8e-24 115.9 82 64.6
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 1.4e-22 111.3 145 42.8
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 2.4e-22 110.5 257 33.5
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.7e-18 96.3 173 39.9
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 1.2e-16 91.7 69 65.2
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 3.4e-16 90.1 68 63.2
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 2.9e-15 87.0 65 66.2
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.9e-14 84.3 130 42.3
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 3.2e-14 83.6 65 63.1
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 6.9e-09 65.9 68 51.5


User provided reference genes

Program Settings