Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 1.3e-149 533.1 271 100.0
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 2.9e-141 505.4 258 100.0
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 2.4e-124 449.1 273 83.5
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 3.8e-117 425.2 271 76.8
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 6.5e-117 424.5 262 79.0
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 8.4e-117 424.1 271 79.3
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 2.1e-115 419.5 267 77.2
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 3.9e-114 415.2 270 77.4
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 2.5e-113 412.5 262 78.6
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 3.3e-113 412.1 263 76.4
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 4.3e-113 411.8 270 77.0
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 9.6e-113 410.6 274 75.9
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 1.6e-112 409.8 271 73.8
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 4.8e-112 408.3 271 73.1
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 6.3e-112 407.9 270 75.6
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 2.4e-111 406.0 271 75.6
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.5e-110 403.3 271 73.4
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.5e-110 403.3 271 73.4
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 1.5e-110 403.3 266 76.3
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 1.0e-109 400.6 271 73.4
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.7e-109 399.8 271 73.8
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 1.7e-109 399.8 271 74.2
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 3.8e-109 398.7 280 73.9
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 3.8e-109 398.7 264 75.8
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 1.1e-108 397.1 340 63.5
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 5.5e-108 394.8 271 74.2
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 9.3e-108 394.0 258 75.2
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 1.2e-107 393.7 261 73.9
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 1.6e-107 393.3 273 72.9
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 2.7e-107 392.5 271 74.2
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.7e-107 392.5 271 74.2
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.0e-106 390.6 261 73.6
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 1.8e-106 389.8 266 72.2
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 2.3e-106 389.4 248 77.4
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 5.1e-106 388.3 261 73.2
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 6.7e-106 387.9 268 71.6
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.9e-105 386.3 259 73.7
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 1.9e-105 386.3 263 73.0
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 1.9e-105 386.3 264 74.6
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 2.5e-105 386.0 261 73.2
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 2.5e-105 386.0 265 72.1
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 2.5e-105 386.0 258 74.0
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 2.5e-105 386.0 264 73.5
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 4.3e-105 385.2 261 73.2
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 2.8e-104 382.5 268 70.9
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 1.1e-103 380.6 261 72.0
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 1.1e-103 380.6 271 70.5
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 1.4e-103 380.2 268 71.3
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 1.5e-102 376.7 268 70.1
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 2.6e-102 375.9 268 70.1
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 5.9e-102 374.8 268 70.5
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 5.9e-102 374.8 268 70.5
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 1.7e-101 373.2 265 69.8
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 1.4e-100 370.2 264 71.6
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 5.5e-100 368.2 264 71.2
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 2.7e-99 365.9 263 70.3
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 1.0e-98 364.0 268 68.3
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 1.4e-98 363.6 265 66.8
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 1.8e-98 363.2 268 68.3
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 1.8e-98 363.2 265 71.7
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 1.1e-97 360.5 263 70.3
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 1.1e-97 360.5 263 68.4
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 1.1e-97 360.5 268 69.0
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 4.4e-97 358.6 265 67.9
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 4.4e-97 358.6 266 70.3
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 5.7e-97 358.2 268 65.7
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 5.7e-97 358.2 271 66.8
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 3.7e-96 355.5 257 70.4
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 1.1e-95 354.0 267 69.7
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 3.1e-95 352.4 268 67.5
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 3.1e-95 352.4 266 68.4
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 1.5e-94 350.1 268 67.2
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 3.4e-94 349.0 267 67.0
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 3.4e-94 349.0 258 70.2
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 7.7e-94 347.8 259 69.1
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 3.8e-93 345.5 265 66.8
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 5.0e-93 345.1 277 67.1
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.9e-92 343.2 270 69.3
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.9e-92 343.2 270 69.3
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 5.5e-92 341.7 277 67.5
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 3.6e-91 339.0 258 64.7
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 7.9e-91 337.8 267 67.4
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 1.0e-90 337.4 257 66.5
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 1.0e-90 337.4 270 67.8
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 2.3e-90 336.3 257 66.1
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 3.0e-90 335.9 257 66.5
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 8.8e-90 334.3 270 67.8
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 1.8e-82 310.1 265 58.9
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 8.0e-75 284.6 262 58.0
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 4.8e-72 275.4 176 76.7
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 2.4e-71 273.1 169 79.3
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 5.4e-71 271.9 173 77.5
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 3.5e-70 269.2 187 70.6
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 1.4e-66 257.3 169 74.0
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 1.8e-63 246.9 170 72.4
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 1.6e-62 243.8 176 69.3
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.5e-60 237.3 137 81.0
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 3.6e-59 232.6 269 46.1
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 4.4e-57 225.7 158 69.6
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 4.4e-57 225.7 261 49.0
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 7.5e-57 224.9 174 67.8
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.8e-55 220.3 263 49.0
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 9.2e-55 218.0 280 46.4
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 3.7e-48 196.1 270 45.9
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 7.0e-47 191.8 215 48.8
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 3.0e-45 186.4 271 43.5
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.2e-38 164.5 267 41.2
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 6.8e-34 148.7 133 60.9
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 6.6e-29 132.1 78 78.2
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 9.6e-28 128.3 271 34.7
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 4.9e-24 115.9 82 64.6
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 1.2e-22 111.3 145 42.8
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 6.2e-19 99.0 82 61.0
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.0e-18 96.3 173 39.9
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 9.9e-17 91.7 69 65.2
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 1.4e-15 87.8 65 66.2
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.6e-14 84.3 130 42.3
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.7e-14 83.6 65 63.1
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 6.9e-10 68.9 82 45.1


User provided reference genes

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