Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 2.6e-119 432.2 234 100.0
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 2.4e-72 276.2 177 77.4
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 9.0e-72 274.2 170 78.8
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.5e-71 273.5 179 74.9
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 2.6e-71 272.7 176 76.1
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 3.4e-71 272.3 175 78.3
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 7.6e-71 271.2 174 75.3
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 7.6e-71 271.2 182 73.6
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 2.9e-70 269.2 177 75.1
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 8.4e-70 267.7 176 75.0
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 1.1e-69 267.3 179 74.9
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.9e-69 266.5 176 74.4
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 1.9e-69 266.5 168 76.8
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 5.5e-69 265.0 207 66.2
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 1.2e-68 263.8 178 74.7
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 2.1e-68 263.1 170 75.3
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 4.6e-68 261.9 179 74.3
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 6.0e-68 261.5 165 77.0
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 1.8e-67 260.0 179 72.1
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 3.0e-67 259.2 187 70.6
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 8.7e-67 257.7 169 74.6
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 1.1e-66 257.3 167 74.3
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.1e-66 257.3 170 74.7
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 2.5e-66 256.1 170 74.1
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 2.5e-66 256.1 176 69.3
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 3.3e-66 255.8 169 73.4
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 3.3e-66 255.8 176 69.3
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 5.6e-66 255.0 169 74.0
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 9.6e-66 254.2 177 70.1
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 3.7e-65 252.3 175 72.0
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 1.1e-64 250.8 180 68.9
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 1.4e-64 250.4 169 72.8
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 1.4e-64 250.4 178 70.2
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 2.4e-64 249.6 174 68.4
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 6.9e-64 248.1 179 67.6
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 1.5e-63 246.9 175 72.0
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 2.0e-63 246.5 175 72.0
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 2.0e-63 246.5 176 68.8
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 3.4e-63 245.7 185 70.3
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 7.6e-63 244.6 172 68.0
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 1.3e-62 243.8 176 69.3
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 1.7e-62 243.4 189 64.0
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 1.7e-62 243.4 169 70.4
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 3.8e-62 242.3 179 66.5
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 4.9e-62 241.9 170 69.4
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 1.1e-61 240.7 176 67.0
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 1.1e-61 240.7 168 70.8
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 1.4e-61 240.4 187 66.8
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 1.9e-61 240.0 190 67.9
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 1.9e-61 240.0 168 68.5
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 2.5e-61 239.6 183 65.0
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 2.5e-61 239.6 171 69.0
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 2.5e-61 239.6 171 69.0
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 3.2e-61 239.2 186 68.8
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 5.5e-61 238.4 171 68.4
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 5.5e-61 238.4 171 68.4
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 5.5e-61 238.4 171 68.4
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 7.1e-61 238.0 171 68.4
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 9.3e-61 237.7 170 70.6
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 1.2e-60 237.3 185 67.0
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 1.2e-60 237.3 176 67.0
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 1.6e-60 236.9 185 67.0
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 1.6e-60 236.9 171 67.3
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 1.6e-60 236.9 171 66.7
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 2.1e-60 236.5 176 65.9
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 2.7e-60 236.1 171 68.4
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 2.7e-60 236.1 175 69.7
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 3.5e-60 235.7 158 74.1
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 6.0e-60 235.0 173 68.8
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 1.8e-59 233.4 167 65.3
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 2.3e-59 233.0 174 66.7
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 2.3e-59 233.0 174 69.5
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 3.0e-59 232.6 166 69.9
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 5.1e-59 231.9 170 68.2
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 5.1e-59 231.9 205 56.1
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 3.3e-58 229.2 181 68.0
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 3.3e-58 229.2 205 56.1
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 3.3e-58 229.2 176 62.5
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 3.3e-58 229.2 171 66.1
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 3.3e-58 229.2 240 52.1
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 8.2e-57 224.6 187 59.4
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 3.4e-55 219.2 146 73.3
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 1.3e-54 217.2 179 64.8
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 5.0e-54 215.3 177 60.5
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 5.0e-54 215.3 179 60.3
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 2.5e-53 213.0 173 61.3
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 5.5e-53 211.8 138 73.9
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 2.1e-52 209.9 136 72.1
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 2.1e-52 209.9 135 76.3
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 2.7e-52 209.5 127 78.7
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 2.3e-51 206.5 129 78.3
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 3.4e-47 192.6 127 72.4
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.0e-42 176.8 183 53.0
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 5.3e-40 168.7 178 50.6
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 1.3e-38 164.1 126 64.3
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 5.0e-38 162.2 175 52.6
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 3.2e-37 159.5 161 55.9
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 7.2e-37 158.3 159 50.9
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 3.0e-35 152.9 197 46.2
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 1.6e-28 130.6 81 72.8
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 1.8e-27 127.1 94 70.2
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 7.5e-26 121.7 167 40.7
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.6e-23 114.0 176 42.6
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 1.6e-23 114.0 128 47.7
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.1e-21 107.8 77 62.3
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 7.2e-21 105.1 164 37.2
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 9.4e-21 104.8 65 75.4
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 2.1e-20 103.6 98 55.1
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 3.7e-17 92.8 140 37.9
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 1.1e-13 81.3 61 59.0
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 1.8e-08 63.9 40 72.5
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 4.1e-08 62.8 48 62.5
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 5.0e-06 55.8 39 66.7


User provided reference genes

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