Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.906 Acer truncatum HOM05D003129 ORTHO05D052828 3.7e-64 248.1 124 100.0
TWI38G0456 Tripterygium wilfordii HOM05D003129 ORTHO05D004326 5.7e-09 64.7 109 38.5
TWI63G0550 Tripterygium wilfordii HOM05D003129 ORTHO05D004326 5.7e-09 64.7 109 37.6
TWI38G1536 Tripterygium wilfordii HOM05D003129 ORTHO05D004326 9.8e-09 63.9 109 38.5
PSO675G6268 Papaver somniferum HOM05D003129 ORTHO05D004326 6.3e-08 61.2 106 39.6
PSO541G6176 Papaver somniferum HOM05D003129 ORTHO05D004326 8.3e-08 60.8 106 38.7
Sed0018741 Sechium edule HOM05D003129 ORTHO05D004326 8.3e-08 60.8 108 35.2
Hund21191 Selenicereus undatus HOM05D003129 ORTHO05D004326 1.1e-07 60.5 106 39.6
ATR0602G129 Amborella trichopoda HOM05D003129 ORTHO05D004326 1.4e-07 60.1 107 39.3
ClCG01G023490 Citrullus lanatus HOM05D003129 ORTHO05D004326 1.4e-07 60.1 108 35.2
MELO3C007237.2 Cucumis melo HOM05D003129 ORTHO05D004326 1.4e-07 60.1 108 35.2
CsaV3_6G050610 Cucumis sativus L. HOM05D003129 ORTHO05D004326 1.4e-07 60.1 108 35.2
Duzib192G0848 Durio zibethinus HOM05D003129 ORTHO05D004326 1.4e-07 60.1 106 36.8
Duzib235G0248 Durio zibethinus HOM05D003129 ORTHO05D004326 1.4e-07 60.1 106 36.8
Gohir.A10G029400 Gossypium hirsutum HOM05D003129 ORTHO05D004326 1.4e-07 60.1 106 36.8
Gohir.D10G029900 Gossypium hirsutum HOM05D003129 ORTHO05D004326 1.4e-07 60.1 106 36.8
Gorai.011G031800 Gossypium raimondii HOM05D003129 ORTHO05D004326 1.4e-07 60.1 106 36.8
Thecc.06G176900 Theobroma cacao HOM05D003129 ORTHO05D004326 1.4e-07 60.1 106 36.8
Gohir.A06G201000 Gossypium hirsutum HOM05D003129 ORTHO05D004326 4.1e-07 58.5 106 34.9
Gohir.D06G208800 Gossypium hirsutum HOM05D003129 ORTHO05D004326 4.1e-07 58.5 106 34.9
Gorai.010G242700 Gossypium raimondii HOM05D003129 ORTHO05D004326 4.1e-07 58.5 106 34.9
MD05G1306200 Malus domestica HOM05D003129 ORTHO05D004326 7.0e-07 57.8 108 34.3
MD10G1285200 Malus domestica HOM05D003129 ORTHO05D004326 7.0e-07 57.8 109 33.9
Eucgr.D00571 Eucalyptus grandis HOM05D003129 ORTHO05D004326 9.2e-07 57.4 106 37.7
Lj2A294T71 Lonicera japonica HOM05D003129 ORTHO05D004326 1.2e-06 57.0 107 36.4
Nn1g06337 Nelumbo nucifera HOM05D003129 ORTHO05D004326 2.7e-06 55.8 106 34.9
TAR627G0274 Trochodendron aralioides HOM05D003129 ORTHO05D004326 2.7e-06 55.8 106 35.8
GSVIVG01021154001 Vitis vinifera HOM05D003129 ORTHO05D004326 2.7e-06 55.8 106 36.8
Atru.chr10.1742 Acer truncatum HOM05D003129 ORTHO05D004326 3.5e-06 55.5 109 33.9
AT1G29030 Arabidopsis thaliana HOM05D003129 ORTHO05D004326 3.5e-06 55.5 108 33.3
CARHR028240 Cardamine hirsuta HOM05D003129 ORTHO05D004326 3.5e-06 55.5 109 33.9
Sp1g24960 Schrenkiella parvula HOM05D003129 ORTHO05D004326 3.5e-06 55.5 109 35.8
AT2G34040 Arabidopsis thaliana HOM05D003129 ORTHO05D004326 4.5e-06 55.1 110 32.7
CSS0027425 Camellia sinensis var. sinensis HOM05D003129 ORTHO05D004326 4.5e-06 55.1 100 41.0
CSS0050257 Camellia sinensis var. sinensis HOM05D003129 ORTHO05D004326 4.5e-06 55.1 94 42.6
Gohir.A06G200950 Gossypium hirsutum HOM05D003129 ORTHO05D004326 4.5e-06 55.1 70 45.7
Prupe.4G056400 Prunus persica HOM05D003129 ORTHO05D004326 4.5e-06 55.1 108 33.3
Ah.10g033800 Amaranthus hybridus HOM05D003129 ORTHO05D004326 5.9e-06 54.7 106 34.0
EL10Ac8g20476 Beta vulgaris HOM05D003129 ORTHO05D004326 5.9e-06 54.7 70 48.6
Thhalv10016466m.g Eutrema salsugineum HOM05D003129 ORTHO05D004326 7.7e-06 54.3 110 31.8
TAR624G0766 Trochodendron aralioides HOM05D003129 ORTHO05D004326 7.7e-06 54.3 106 34.9


User provided reference genes

Program Settings