Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.88 Acer truncatum HOM05D007655 ORTHO05D009698 1.2e-178 629.8 337 100.0
Cfa013933 Carpinus fangiana HOM05D007655 ORTHO05D009698 4.6e-77 292.4 339 47.8
Actinidia00669 Actinidia chinensis HOM05D007655 ORTHO05D009698 6.2e-74 282.0 317 49.2
Lalb_Chr03g0033351 Lupinus albus HOM05D007655 ORTHO05D009698 1.7e-71 273.9 333 48.6
Haze_22616 Corylus avellana HOM05D007655 ORTHO05D009698 2.9e-71 273.1 334 45.2
Psat1g113880 Pisum sativum HOM05D007655 ORTHO05D009698 1.9e-70 270.4 330 45.8
DCAR_029510 Daucus carota HOM05D007655 ORTHO05D009698 7.4e-67 258.5 307 45.0
TPR.G40357 Trifolium pratense HOM05D007655 ORTHO05D009698 4.8e-66 255.8 329 42.9
Ca_25253_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 4.0e-65 252.7 313 49.2
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 1.2e-64 251.1 311 45.0
CiPaw.02G194200 Carya illinoinensis HOM05D007655 ORTHO05D009698 1.7e-63 247.3 334 43.4
CAN.G1161.24 Capsicum annuum HOM05D007655 ORTHO05D009698 3.5e-61 239.6 300 42.7
Ciclev10033792m.g Citrus clementina HOM05D007655 ORTHO05D000636 4.6e-61 239.2 318 49.4
MSTRG.197 Avicennia marina HOM05D007655 ORTHO05D009698 7.9e-61 238.4 278 43.5
Ca_19338_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 1.0e-60 238.0 329 43.5
Nitab4.5_0002701g0030 Nicotiana tabacum HOM05D007655 ORTHO05D009698 4.3e-59 232.6 296 43.2
Hma1.2p1_0523F.1_g172110 Hydrangea macrophylla HOM05D007655 ORTHO05D009698 1.3e-58 231.1 301 45.2
TWI09G1069 Tripterygium wilfordii HOM05D007655 ORTHO05D009698 1.6e-58 230.7 331 46.2
Cc00_g02280 Coffea canephora HOM05D007655 ORTHO05D009698 5.8e-56 222.2 300 41.3
Cpa.g.sc19.153 Carica papaya HOM05D007655 ORTHO05D009698 1.3e-55 221.1 333 46.5
Gohir.A06G170600 Gossypium hirsutum HOM05D007655 ORTHO05D009698 4.9e-55 219.2 338 39.9
Thecc.10G013100 Theobroma cacao HOM05D007655 ORTHO05D009698 2.1e-53 213.8 337 44.2
Lj1P959T25 Lonicera japonica HOM05D007655 ORTHO05D009698 3.5e-53 213.0 304 46.1
HanXRQChr09g0253251 Helianthus annuus HOM05D007655 ORTHO05D009698 4.6e-53 212.6 297 40.1
COL.COLO4_06431 Corchorus olitorius HOM05D007655 ORTHO05D009698 6.0e-53 212.2 335 43.6
AT3G56030 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 1.0e-52 211.5 334 38.0
Peaxi162Scf00304g00006 Petunia axillaris HOM05D007655 ORTHO05D009698 2.3e-52 210.3 290 42.4
Carub.0005s2276 Capsella rubella HOM05D007655 ORTHO05D009698 3.9e-52 209.5 336 37.8
Lj2g0024512 Lotus japonicus HOM05D007655 ORTHO05D009698 9.6e-51 204.9 325 37.2
PGR044G0328 Punica granatum HOM05D007655 ORTHO05D009698 9.6e-51 204.9 320 37.8
AL5G37300 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 1.8e-49 200.7 332 37.0
QL08p063505 Quercus lobata HOM05D007655 ORTHO05D009698 3.1e-49 199.9 334 41.3
RcHm_v2.0_Chr1g0370651 Rosa chinensis HOM05D007655 ORTHO05D009698 6.9e-49 198.7 334 41.6
FvH4_7g24790 Fragaria vesca HOM05D007655 ORTHO05D009698 9.0e-49 198.4 335 38.8
FAN06G4929 Fragaria x ananassa HOM05D007655 ORTHO05D009698 9.0e-49 198.4 335 38.8
PGSC0003DMG400027723 Solanum tuberosum HOM05D007655 ORTHO05D009698 5.9e-48 195.7 296 44.3
FAN10G0222 Fragaria x ananassa HOM05D007655 ORTHO05D009698 1.0e-47 194.9 316 42.4
Sopen03g025960 Solanum pennellii HOM05D007655 ORTHO05D009698 1.0e-47 194.9 295 44.1
Gohir.D06G178400 Gossypium hirsutum HOM05D007655 ORTHO05D009698 1.3e-47 194.5 338 42.0
A09p48980 Brassica napus HOM05D007655 ORTHO05D009698 6.5e-47 192.2 331 37.2
BraA09t40353Z Brassica rapa HOM05D007655 ORTHO05D009698 6.5e-47 192.2 331 37.2
Gorai.N006800 Gossypium raimondii HOM05D007655 ORTHO05D009698 1.4e-46 191.0 338 41.7
Nitab4.5_0006468g0020 Nicotiana tabacum HOM05D007655 ORTHO05D009698 2.5e-46 190.3 296 42.2
Solyc03g095960.1 Solanum lycopersicum HOM05D007655 ORTHO05D009698 4.2e-46 189.5 295 43.7
C08p31340 Brassica napus HOM05D007655 ORTHO05D009698 3.5e-45 186.4 284 37.7
BolC8t50755H Brassica oleracea HOM05D007655 ORTHO05D009698 3.5e-45 186.4 284 37.7
Sp5g06510 Schrenkiella parvula HOM05D007655 ORTHO05D009698 4.6e-45 186.0 291 37.1
Aa31LG5G19330 Aethionema arabicum HOM05D007655 ORTHO05D009698 6.1e-45 185.7 295 35.9
Duzib106G0934 Durio zibethinus HOM05D007655 ORTHO05D009698 7.9e-45 185.3 338 41.1
Sopen03g025950 Solanum pennellii HOM05D007655 ORTHO05D009698 1.3e-44 184.5 280 43.2
CARHR166100 Cardamine hirsuta HOM05D007655 ORTHO05D009698 2.5e-43 180.3 339 35.1
Prupe.2G253200 Prunus persica HOM05D000815 ORTHO05D000636 5.7e-43 179.1 298 38.3
Phvul.004G132400 Phaseolus vulgaris HOM05D007655 ORTHO05D009698 1.4e-41 174.5 329 33.4
CANSAT56G4119 Cannabis sativa HOM05D007655 ORTHO05D009698 2.4e-41 173.7 321 39.9
GSVIVG01032781001 Vitis vinifera HOM05D007655 ORTHO05D009698 9.0e-41 171.8 301 41.5
Thhalv10006093m.g Eutrema salsugineum HOM05D007655 ORTHO05D009698 3.4e-40 169.9 332 34.0
Aqoxy3G03604 Aquilegia oxysepala HOM05D007655 ORTHO05D009698 1.3e-39 167.9 303 38.3
TAR131G0001 Trochodendron aralioides HOM05D007655 ORTHO05D009698 1.3e-39 167.9 331 38.4
TAR623G1347 Trochodendron aralioides HOM05D007655 ORTHO05D009698 1.3e-39 167.9 331 38.4
Medtr6g065100 Medicago truncatula HOM05D007655 ORTHO05D009698 2.2e-39 167.2 296 35.5
Glyma.09G157400 Glycine max HOM05D007655 ORTHO05D009698 2.9e-39 166.8 327 34.3
Rhsim09G0178900 Rhododendron simsii HOM05D007655 ORTHO05D009698 1.9e-38 164.1 326 39.6
vmacro10028 Vaccinium macrocarpon HOM05D007655 ORTHO05D009698 4.2e-38 162.9 330 40.6
CARHR135280 Cardamine hirsuta HOM05D007655 ORTHO05D009698 2.7e-37 160.2 289 40.1
ECA232G4997 Erigeron canadensis HOM05D007655 ORTHO05D009698 2.7e-37 160.2 297 35.0
Sc14g0002050 Simmondsia chinensis HOM05D007655 ORTHO05D009698 2.3e-36 157.1 296 37.5
AT2G40240 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 5.1e-36 156.0 334 35.9
Carub.0004s2246 Capsella rubella HOM05D007655 ORTHO05D009698 6.7e-36 155.6 314 36.6
AL4G37960 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 1.3e-34 151.4 289 37.7
Lalb_Chr19g0131421 Lupinus albus HOM05D007655 ORTHO05D009698 2.2e-34 150.6 158 49.4
Aa31LG10G10970 Aethionema arabicum HOM05D007655 ORTHO05D009698 8.2e-34 148.7 336 34.8
VMungo0464G0151 Vigna mungo HOM05D007655 ORTHO05D009698 2.4e-33 147.1 315 31.1
Potri.008G141700 Populus trichocarpa HOM05D007655 ORTHO05D009698 4.1e-33 146.4 176 47.7
CSS0030670 Camellia sinensis var. sinensis HOM05D007655 ORTHO05D009698 5.5e-30 136.0 197 41.1
Haze_17251 Corylus avellana HOM05D007655 ORTHO05D009698 1.6e-29 134.4 118 55.1
FAN03G2547 Fragaria x ananassa HOM05D007655 ORTHO05D009698 2.1e-29 134.0 316 33.5
THA.LOC104810115 Tarenaya hassleriana HOM05D007655 ORTHO05D009698 2.7e-29 133.7 334 35.0
Migut.F01479 Erythranthe guttata HOM05D007655 ORTHO05D009698 6.1e-29 132.5 311 29.9
Lsat_1_v5_gn_9_61061 Lactuca sativa HOM05D007655 ORTHO05D009698 7.0e-25 119.0 269 36.4
arahy.Tifrunner.gnm1.ann1.P4Y6YZ Arachis hypogaea HOM05D000585 ORTHO05D001841 1.7e-23 114.4 175 36.0
Oeu029071.1 Olea europaea HOM05D007655 ORTHO05D009698 4.2e-22 109.8 283 32.9
SalBow5G5388 Salvia bowleyana HOM05D007655 ORTHO05D009698 5.5e-22 109.4 137 43.1
MBI15_g28821_MAGBIO Magnolia biondii HOM05D007655 ORTHO05D009698 4.7e-21 106.3 302 26.2
CDE06G0331 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 3.0e-20 103.6 315 30.2
SEGI_06165 Sequoiadendron giganteum HOM05D007655 ORTHO05D009698 6.7e-20 102.4 234 28.6
arahy.Tifrunner.gnm1.ann1.L8T4NM Arachis hypogaea HOM05D007655 ORTHO05D009698 8.8e-20 102.1 178 35.4
ATR0030G034 Amborella trichopoda HOM05D007655 ORTHO05D009698 2.2e-18 97.4 274 24.1
CDE12G0438 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 7.7e-16 89.0 134 37.3
FAN01G0024 Fragaria x ananassa HOM05D007655 ORTHO05D009698 2.5e-14 84.0 201 30.8
ATR0174G045 Amborella trichopoda HOM05D007655 ORTHO05D009698 9.4e-14 82.0 114 38.6
Haze_17252 Corylus avellana HOM05D007655 ORTHO05D009698 1.8e-12 77.8 101 44.6
Cpa.g.sc64.144 Carica papaya HOM05D000424 ORTHO05D000355 1.2e-11 75.1 214 28.0
Nn2g13207 Nelumbo nucifera HOM05D007655 ORTHO05D009698 9.8e-11 72.0 79 53.2
HanXRQChr07g0199321 Helianthus annuus HOM05D006569 ORTHO05D007515 1.7e-10 71.2 213 24.9
Gorai.001G205200 Gossypium raimondii HOM05D007655 ORTHO05D009698 3.7e-10 70.1 89 46.1
Gohir.D07G184750 Gossypium hirsutum HOM05D007655 ORTHO05D009698 2.4e-09 67.4 89 46.1
Cc11_g04640 Coffea canephora HOM05D007884 ORTHO05D009968 7.0e-09 65.9 272 22.8
CDE04G2579 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 9.1e-09 65.5 145 29.7
Zm00001eb001440 Zea mays HOM05D007884 ORTHO05D009968 7.7e-08 62.4 313 22.4
Os03g0119700 Oryza sativa ssp. japonica HOM05D007884 ORTHO05D009968 1.7e-07 61.2 279 20.4
HanXRQChr05g0149191 Helianthus annuus HOM05D000424 ORTHO05D000355 8.5e-07 58.9 134 29.1
MBI18_g10377_MAGBIO Magnolia biondii HOM05D000424 ORTHO05D000355 1.5e-06 58.2 138 29.0
Sc06g0009870 Simmondsia chinensis HOM05D003210 ORTHO05D000001 1.5e-06 58.2 125 28.8
Lsat_1_v5_gn_7_77221 Lactuca sativa HOM05D002825 ORTHO05D003824 2.5e-06 57.4 102 30.4
DCAR_018877 Daucus carota HOM05D000424 ORTHO05D000355 3.2e-06 57.0 166 25.9
Lsat_1_v5_gn_6_109101 Lactuca sativa HOM05D000424 ORTHO05D000355 3.2e-06 57.0 135 28.1
Cpa.g.sc332.2 Carica papaya HOM05D007173 ORTHO05D009589 7.2e-06 55.8 204 21.1
AUR62044184 Chenopodium quinoa HOM05D000891 ORTHO05D000761 7.2e-06 55.8 215 24.7
AT5G25630 Arabidopsis thaliana HOM05D003689 ORTHO05D003950 9.5e-06 55.5 161 25.5
EL10Ac7g16936 Beta vulgaris HOM05D000424 ORTHO05D000355 9.5e-06 55.5 138 27.5
Ciclev10000990m.g Citrus clementina HOM05D000424 ORTHO05D000355 9.5e-06 55.5 138 28.3
ECA246G4611 Erigeron canadensis HOM05D000424 ORTHO05D000355 9.5e-06 55.5 135 27.4


User provided reference genes

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