Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 6.3e-70 267.3 135 100.0
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 1.4e-53 213.0 135 79.3
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 3.2e-53 211.8 135 79.3
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 5.4e-53 211.1 135 78.5
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 2.7e-52 208.8 135 77.0
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 3.5e-52 208.4 135 80.0
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 4.6e-52 208.0 127 78.0
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.3e-51 206.5 135 76.3
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 1.3e-51 206.5 135 76.3
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.7e-51 206.1 135 76.3
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 8.6e-51 203.8 135 74.8
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 8.6e-51 203.8 129 76.0
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 3.3e-50 201.8 130 76.2
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 2.8e-49 198.7 130 76.2
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 1.1e-48 196.8 135 76.3
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.8e-48 196.1 121 77.7
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 1.2e-47 193.4 145 68.3
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 1.5e-47 193.0 135 72.6
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 1.5e-47 193.0 116 77.6
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 2.0e-47 192.6 136 75.0
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 3.4e-47 191.8 111 82.9
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 3.4e-47 191.8 130 72.3
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 4.4e-47 191.4 111 83.8
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 4.4e-47 191.4 111 83.8
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 4.4e-47 191.4 110 80.0
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 5.8e-47 191.0 104 84.6
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 1.3e-46 189.9 135 71.9
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 1.3e-46 189.9 132 73.5
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 1.3e-46 189.9 132 72.7
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 1.7e-46 189.5 135 70.4
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 2.2e-46 189.1 132 72.7
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 2.2e-46 189.1 133 72.9
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 2.9e-46 188.7 125 74.4
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 3.7e-46 188.3 135 71.1
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 6.4e-46 187.6 112 78.6
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 6.4e-46 187.6 134 72.4
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 8.3e-46 187.2 110 82.7
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 1.4e-45 186.4 108 82.4
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 1.4e-45 186.4 126 73.8
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 1.9e-45 186.0 126 72.2
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 2.4e-45 185.7 107 79.4
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 3.2e-45 185.3 141 70.9
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 4.1e-45 184.9 118 79.7
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 5.4e-45 184.5 136 72.1
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 7.1e-45 184.1 108 78.7
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 9.2e-45 183.7 119 74.8
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 1.6e-44 183.0 130 68.5
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 1.6e-44 183.0 128 72.7
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 2.1e-44 182.6 135 71.9
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 2.1e-44 182.6 110 81.8
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 3.5e-44 181.8 133 71.4
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 3.5e-44 181.8 125 70.4
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 3.5e-44 181.8 133 71.4
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 3.5e-44 181.8 128 71.9
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 3.5e-44 181.8 108 78.7
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 4.6e-44 181.4 135 71.1
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.6e-44 181.4 130 70.8
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 4.6e-44 181.4 103 82.5
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 4.6e-44 181.4 136 69.9
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 6.0e-44 181.0 135 71.1
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 6.0e-44 181.0 109 80.7
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 7.8e-44 180.6 119 72.3
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 7.8e-44 180.6 133 71.4
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 7.8e-44 180.6 109 78.9
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 7.8e-44 180.6 125 72.0
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 1.3e-43 179.9 127 70.9
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 1.7e-43 179.5 121 72.7
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 1.7e-43 179.5 133 69.9
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 3.0e-43 178.7 125 72.0
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 3.0e-43 178.7 113 77.0
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 3.9e-43 178.3 109 77.1
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 3.9e-43 178.3 123 72.4
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 5.1e-43 177.9 107 75.7
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 6.6e-43 177.6 112 74.1
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.5e-42 176.4 115 75.7
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.9e-42 176.0 132 65.9
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.9e-42 176.0 130 68.5
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 1.9e-42 176.0 130 66.9
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 1.9e-42 176.0 124 71.0
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 3.3e-42 175.3 134 68.7
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 5.6e-42 174.5 106 78.3
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 7.3e-42 174.1 134 67.2
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 1.2e-41 173.3 115 73.9
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 2.1e-41 172.6 120 71.7
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 2.8e-41 172.2 159 61.0
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 1.8e-40 169.5 105 77.1
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 2.3e-40 169.1 97 81.4
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 2.3e-40 169.1 124 69.4
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 2.3e-40 169.1 110 72.7
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 3.1e-40 168.7 124 66.1
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 6.8e-40 167.5 112 69.6
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 1.5e-39 166.4 108 70.4
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 2.0e-39 166.0 113 67.3
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 2.0e-39 166.0 158 57.0
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 5.8e-39 164.5 160 53.8
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 5.8e-39 164.5 175 55.4
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 5.8e-39 164.5 151 60.9
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 4.9e-38 161.4 127 64.6
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 7.1e-37 157.5 115 65.2
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.6e-36 156.4 107 72.0
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.7e-35 152.9 109 72.5
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 1.9e-34 149.4 109 70.6
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 2.1e-33 146.0 102 72.5
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 2.4e-32 142.5 117 64.1
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 3.1e-32 142.1 87 79.3
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 2.9e-30 135.6 113 60.2
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 8.4e-30 134.0 92 73.9
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.2e-28 130.2 85 76.5
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 1.3e-27 126.7 108 54.6
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 3.0e-27 125.6 68 89.7
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 3.9e-27 125.2 68 89.7
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 4.3e-26 121.7 126 54.0
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 5.3e-24 114.8 71 74.6
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 3.4e-23 112.1 66 78.8
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 1.3e-22 110.2 67 77.6
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 1.9e-21 106.3 94 61.7
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 6.0e-20 101.3 104 47.1
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 3.0e-19 99.0 67 71.6
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 6.7e-19 97.8 90 54.4
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 6.2e-17 91.3 103 44.7
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.2e-15 87.0 109 45.0
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 3.4e-15 85.5 57 71.9
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 3.4e-15 85.5 98 36.7
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 4.2e-13 78.6 90 34.4
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 2.3e-11 72.8 66 62.1
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 2.4e-08 62.8 68 54.4


User provided reference genes

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