Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 1.9e-98 362.5 179 100.0
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 1.9e-98 362.5 179 100.0
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 1.7e-83 312.8 178 84.3
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 3.3e-82 308.5 179 83.8
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 4.3e-82 308.1 173 85.0
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 1.3e-81 306.6 179 83.2
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 2.8e-81 305.4 179 82.1
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 2.8e-81 305.4 179 81.6
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 1.1e-80 303.5 179 81.0
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 1.8e-80 302.8 179 81.6
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 2.4e-80 302.4 179 80.4
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 4.0e-80 301.6 179 80.4
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 4.0e-80 301.6 178 81.5
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 6.9e-80 300.8 179 80.4
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 2.6e-79 298.9 179 80.4
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 3.4e-79 298.5 174 81.6
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 7.6e-79 297.4 179 79.9
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 7.6e-79 297.4 179 78.8
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 9.9e-79 297.0 173 82.7
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 9.9e-79 297.0 175 80.0
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 1.7e-78 296.2 179 80.4
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 1.7e-78 296.2 179 79.9
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 2.2e-78 295.8 179 79.9
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 2.2e-78 295.8 179 79.9
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 2.9e-78 295.4 179 80.4
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.9e-78 295.4 177 78.5
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 3.8e-78 295.0 179 79.3
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 4.9e-78 294.7 176 80.1
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 8.4e-78 293.9 175 80.0
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 1.1e-77 293.5 179 77.1
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 1.9e-77 292.7 175 80.0
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 2.4e-77 292.4 180 78.3
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 2.4e-77 292.4 179 76.5
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 7.1e-77 290.8 173 79.8
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 9.3e-77 290.4 179 79.3
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 9.3e-77 290.4 179 79.3
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 1.6e-76 289.7 177 79.1
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 2.1e-76 289.3 178 75.8
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 2.7e-76 288.9 178 75.8
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 4.6e-76 288.1 178 77.5
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 4.6e-76 288.1 176 77.3
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 6.0e-76 287.7 173 78.0
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 6.0e-76 287.7 168 80.4
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 6.0e-76 287.7 173 79.8
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 6.0e-76 287.7 174 77.0
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 1.0e-75 287.0 177 76.3
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 1.0e-75 287.0 174 77.6
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 1.0e-75 287.0 177 78.0
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 3.0e-75 285.4 172 79.1
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 3.0e-75 285.4 175 77.1
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 3.9e-75 285.0 177 77.4
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 6.6e-75 284.3 174 77.0
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 6.6e-75 284.3 177 77.4
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 1.1e-74 283.5 172 80.2
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 3.3e-74 282.0 173 78.6
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 3.3e-74 282.0 179 76.0
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 4.3e-74 281.6 173 78.0
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 7.3e-74 280.8 173 77.5
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 1.3e-73 280.0 177 76.3
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 2.1e-73 279.3 177 75.7
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 4.8e-73 278.1 177 76.3
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 6.2e-73 277.7 176 73.9
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 8.1e-73 277.3 177 75.1
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 8.1e-73 277.3 179 73.2
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 1.1e-72 276.9 172 77.9
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 1.1e-72 276.9 180 73.3
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 1.8e-72 276.2 178 74.2
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 2.4e-72 275.8 175 77.1
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 2.4e-72 275.8 172 76.7
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 4.0e-72 275.0 179 73.2
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 4.0e-72 275.0 178 74.2
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 6.9e-72 274.2 174 72.4
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 6.9e-72 274.2 178 73.6
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 9.0e-72 273.9 176 74.4
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 9.0e-72 273.9 171 77.2
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 9.0e-72 273.9 179 73.2
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 3.4e-71 271.9 176 73.9
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 3.4e-71 271.9 178 72.5
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 4.5e-71 271.6 180 74.4
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 7.6e-71 270.8 176 73.9
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 7.6e-71 270.8 176 73.9
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 2.2e-70 269.2 173 73.4
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 1.4e-69 266.5 177 74.0
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 1.9e-69 266.2 173 72.3
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 1.9e-69 266.2 173 72.8
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 4.2e-69 265.0 173 72.8
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 2.1e-68 262.7 175 73.1
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 3.5e-68 261.9 173 71.7
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 1.0e-67 260.4 165 73.9
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 2.3e-67 259.2 160 73.8
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 3.0e-67 258.8 199 65.3
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 8.7e-67 257.3 174 70.1
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 4.3e-66 255.0 180 71.7
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 5.6e-66 254.6 172 70.3
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 5.6e-66 254.6 174 70.1
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 9.6e-66 253.8 180 68.9
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 2.8e-65 252.3 183 67.2
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 2.4e-64 249.2 176 69.9
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 9.0e-64 247.3 164 73.2
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 3.4e-63 245.4 173 71.1
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 1.4e-61 240.0 172 68.6
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 5.5e-61 238.0 178 65.2
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 1.9e-58 229.6 142 77.5
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 1.9e-58 229.6 171 65.5
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 3.3e-58 228.8 177 63.3
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 4.8e-57 224.9 184 62.5
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 5.8e-55 218.0 174 61.5
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 1.0e-54 217.2 183 61.7
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 1.3e-54 216.9 183 61.7
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 5.0e-54 214.9 185 61.6
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 4.6e-52 208.4 172 57.6
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 3.9e-51 205.3 172 60.5
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 5.7e-50 201.4 178 56.7
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 5.7e-50 201.4 172 58.7
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 2.5e-45 186.0 127 76.4
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 6.1e-44 181.4 173 53.2
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 5.1e-43 178.3 117 76.1
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 4.7e-36 155.2 183 46.4
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 2.0e-31 139.8 91 70.3
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 5.9e-31 138.3 113 57.5
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 7.2e-29 131.3 92 72.8
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 5.2e-27 125.2 83 74.7
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 8.8e-27 124.4 102 60.8
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 1.1e-26 124.0 83 72.3
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 3.3e-26 122.5 89 65.2
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 2.0e-23 113.2 85 67.1
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 5.0e-22 108.6 79 69.6
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 1.2e-20 104.0 88 58.0
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 8.0e-20 101.3 82 62.2
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 8.0e-20 101.3 82 62.2
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 6.3e-17 91.7 79 62.0
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 9.1e-16 87.8 83 54.2
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.2e-13 79.0 115 42.6
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 4.2e-13 79.0 119 36.1
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 2.7e-12 76.3 88 52.3
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 6.1e-12 75.1 44 70.5
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 2.3e-11 73.2 77 50.6
Actinidia37356 Actinidia chinensis HOM05D002510 ORTHO05D006928 2.0e-10 70.1 54 63.0
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 6.3e-09 65.1 84 38.1
VMungo0251G2398 Vigna mungo HOM05D002510 ORTHO05D006928 6.6e-06 55.1 34 79.4
AagrBONN_evm.TU.Sc2ySwM_344.3527 Anthoceros agrestis HOM05D005733 ORTHO05D007442 8.6e-06 54.7 146 35.6


User provided reference genes

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