Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.776 Acer truncatum HOM05D008287 ORTHO05D010110 1.5e-71 272.7 138 100.0
Atru.chr12.751 Acer truncatum HOM05D008287 ORTHO05D010110 5.9e-39 164.5 87 95.4
Sabra10G0172000 Salix brachista HOM05D008287 ORTHO05D010110 3.9e-14 82.0 93 51.6
Rhsim09G0151900 Rhododendron simsii HOM05D008287 ORTHO05D010110 1.2e-12 77.0 96 52.1
Phvul.004G082500 Phaseolus vulgaris HOM05D008287 ORTHO05D010110 1.6e-12 76.6 87 49.4
ClCG05G021010 Citrullus lanatus HOM05D008287 ORTHO05D010110 6.2e-12 74.7 96 51.0
TAR629G1172 Trochodendron aralioides HOM05D008287 ORTHO05D010110 8.1e-12 74.3 117 41.9
Ciclev10033160m.g Citrus clementina HOM05D008287 ORTHO05D010110 1.1e-11 73.9 96 51.0
Manes.10G045900 Manihot esculenta HOM05D008287 ORTHO05D010110 1.1e-11 73.9 102 50.0
Nn2g10792 Nelumbo nucifera HOM05D008287 ORTHO05D010110 1.1e-11 73.9 100 48.0
Thecc.10G073600 Theobroma cacao HOM05D008287 ORTHO05D010110 1.1e-11 73.9 87 48.3
Actinidia38852 Actinidia chinensis HOM05D008287 ORTHO05D010110 1.4e-11 73.6 88 45.5
Hma1.2p1_0063F.1_g034480 Hydrangea macrophylla HOM05D008287 ORTHO05D010110 2.3e-11 72.8 87 51.7
Potri.010G222400 Populus trichocarpa HOM05D008287 ORTHO05D010110 2.3e-11 72.8 104 47.1
Sc09g0006380 Simmondsia chinensis HOM05D008287 ORTHO05D010110 2.3e-11 72.8 97 49.5
Duzib114G0252 Durio zibethinus HOM05D008287 ORTHO05D010110 4.0e-11 72.0 89 44.9
Glyma.02G073500 Glycine max HOM05D008287 ORTHO05D010110 8.9e-11 70.9 89 46.1
Gohir.D13G023100 Gossypium hirsutum HOM05D008287 ORTHO05D010110 1.5e-10 70.1 88 46.6
Prupe.2G213800 Prunus persica HOM05D008287 ORTHO05D010110 1.5e-10 70.1 96 41.7
Migut.F02005 Erythranthe guttata HOM05D008287 ORTHO05D010110 2.0e-10 69.7 87 47.1
MD01G1108600 Malus domestica HOM05D008287 ORTHO05D010110 2.0e-10 69.7 95 48.4
TPR.G822 Trifolium pratense HOM05D008287 ORTHO05D010110 2.0e-10 69.7 87 44.8
Gohir.A13G024200 Gossypium hirsutum HOM05D008287 ORTHO05D010110 3.4e-10 68.9 93 44.1
Gorai.013G025800 Gossypium raimondii HOM05D008287 ORTHO05D010110 3.4e-10 68.9 94 43.6
Aqoxy1G01238 Aquilegia oxysepala HOM05D008287 ORTHO05D010110 5.8e-10 68.2 93 49.5
Potri.008G039901 Populus trichocarpa HOM05D008287 ORTHO05D010110 5.8e-10 68.2 93 41.9
MSTRG.9186 Avicennia marina HOM05D008287 ORTHO05D010110 7.5e-10 67.8 89 46.1
Glyma.16G154900 Glycine max HOM05D008287 ORTHO05D010110 1.7e-09 66.6 88 45.5
VMungo0464G1886 Vigna mungo HOM05D008287 ORTHO05D010110 4.9e-09 65.1 97 47.4
CsaV3_5G036300 Cucumis sativus L. HOM05D008287 ORTHO05D010110 8.3e-09 64.3 102 45.1
Lalb_Chr19g0129701 Lupinus albus HOM05D008287 ORTHO05D010110 1.4e-08 63.5 90 47.8
Solyc04g049407.1 Solanum lycopersicum HOM05D008287 ORTHO05D010110 1.4e-08 63.5 97 45.4
Sopen04g019400 Solanum pennellii HOM05D008287 ORTHO05D010110 1.9e-08 63.2 90 42.2
PGSC0003DMG400012876 Solanum tuberosum HOM05D008287 ORTHO05D010110 1.9e-08 63.2 90 41.1
Sed0007335 Sechium edule HOM05D008287 ORTHO05D010110 7.1e-08 61.2 101 44.6
Cfa021511 Carpinus fangiana HOM05D008287 ORTHO05D010110 1.2e-07 60.5 92 43.5
CiPaw.01G272900 Carya illinoinensis HOM05D008287 ORTHO05D010110 1.6e-07 60.1 105 41.9
MBI10_g13401_MAGBIO Magnolia biondii HOM05D008287 ORTHO05D010110 7.8e-07 57.8 93 46.2
Sabra08G0027300 Salix brachista HOM05D008287 ORTHO05D010110 1.0e-06 57.4 35 74.3
unitig_899.g14438 Utricularia gibba HOM05D008287 ORTHO05D010110 1.3e-06 57.0 87 41.4
ECA238G2524 Erigeron canadensis HOM05D008287 ORTHO05D010110 2.3e-06 56.2 89 36.0
RcHm_v2.0_Chr1g0363411 Rosa chinensis HOM05D008287 ORTHO05D010110 2.3e-06 56.2 95 41.1
FvH4_7g19600 Fragaria vesca HOM05D008287 ORTHO05D010110 3.0e-06 55.8 86 40.7
FAN06G2349 Fragaria x ananassa HOM05D000286 ORTHO05D009721 3.0e-06 55.8 86 40.7
HanXRQChr01g0011461 Helianthus annuus HOM05D008287 ORTHO05D010110 3.0e-06 55.8 95 32.6
PGR142G4013 Punica granatum HOM05D008287 ORTHO05D010110 3.9e-06 55.5 107 30.8
FAN01G1692 Fragaria x ananassa HOM05D008287 ORTHO05D010110 5.1e-06 55.1 86 41.9


User provided reference genes

Program Settings