Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.659 Acer truncatum HOM05D003020 ORTHO05D003226 1.0e-140 503.4 265 100.0
Atru.chr12.686 Acer truncatum HOM05D003020 ORTHO05D003226 1.0e-140 503.4 265 100.0
CiPaw.07G071600 Carya illinoinensis HOM05D003020 ORTHO05D003226 1.4e-28 131.0 273 41.0
CiPaw.02G176000 Carya illinoinensis HOM05D003020 ORTHO05D003226 5.8e-27 125.6 268 39.2
Duzib106G1942 Durio zibethinus HOM05D003020 ORTHO05D003226 2.9e-26 123.2 295 36.3
Haze_16927 Corylus avellana HOM05D003020 ORTHO05D003226 1.6e-24 117.5 256 39.8
QL08p056680 Quercus lobata HOM05D003020 ORTHO05D003226 1.6e-24 117.5 298 37.6
Thecc.10G069300 Theobroma cacao HOM05D003020 ORTHO05D003226 7.9e-24 115.2 300 33.0
Potri.008G043300 Populus trichocarpa HOM05D003020 ORTHO05D003226 3.9e-23 112.8 280 36.8
Sabra08G0029900 Salix brachista HOM05D003020 ORTHO05D003226 1.9e-22 110.5 288 38.2
Cpa.g.sc53.28 Carica papaya HOM05D003020 ORTHO05D003226 7.4e-22 108.6 293 35.8
FAN10G0626 Fragaria x ananassa HOM05D003020 ORTHO05D003226 2.8e-21 106.7 278 36.7
Prupe.2G217400 Prunus persica HOM05D003020 ORTHO05D003226 2.8e-21 106.7 292 33.9
FvH4_7g20070 Fragaria vesca HOM05D003020 ORTHO05D003226 6.3e-21 105.5 277 36.1
RcHm_v2.0_Chr1g0364021 Rosa chinensis HOM05D003020 ORTHO05D003226 6.3e-21 105.5 276 35.5
FAN06G0496 Fragaria x ananassa HOM05D003020 ORTHO05D003226 8.2e-21 105.1 277 36.1
Medtr1g095730 Medicago truncatula HOM05D003020 ORTHO05D003226 8.2e-21 105.1 273 37.0
Lalb_Chr19g0129551 Lupinus albus HOM05D003020 ORTHO05D003226 1.1e-20 104.8 268 37.7
Potri.010G218300 Populus trichocarpa HOM05D003020 ORTHO05D003226 1.4e-20 104.4 272 37.9
FAN03G1700 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.8e-20 104.0 277 36.1
Cfa001601 Carpinus fangiana HOM05D003020 ORTHO05D003226 2.4e-20 103.6 274 36.1
Manes.07G102900 Manihot esculenta HOM05D003020 ORTHO05D003226 4.1e-20 102.8 291 35.7
CiPaw.01G275700 Carya illinoinensis HOM05D003020 ORTHO05D003226 2.6e-19 100.1 257 34.2
Dinv31354 Davidia involucrata HOM05D003020 ORTHO05D003226 4.5e-19 99.4 239 35.1
Sabra10G0168900 Salix brachista HOM05D003020 ORTHO05D003226 4.5e-19 99.4 262 38.5
TPR.G1799 Trifolium pratense HOM05D003020 ORTHO05D003226 7.7e-19 98.6 277 34.3
Manes.10G043600 Manihot esculenta HOM05D003020 ORTHO05D003226 1.3e-18 97.8 260 35.0
Ca_10586_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 1.7e-18 97.4 277 34.3
Dinv11798 Davidia involucrata HOM05D003020 ORTHO05D003226 2.9e-18 96.7 236 35.2
VMungo0720G0200 Vigna mungo HOM05D003020 ORTHO05D003226 5.0e-18 95.9 244 37.7
Glyma.10G213000 Glycine max HOM05D003020 ORTHO05D003226 6.5e-18 95.5 257 36.6
Hma1.2p1_0453F.1_g156030 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 6.5e-18 95.5 239 33.5
Sabra16G0321600 Salix brachista HOM05D003020 ORTHO05D003226 8.5e-18 95.1 238 39.1
Lalb_Chr03g0036011 Lupinus albus HOM05D003020 ORTHO05D003226 5.5e-17 92.4 250 36.8
Sabra16G0323200 Salix brachista HOM05D003020 ORTHO05D003226 5.5e-17 92.4 229 38.9
Duzib114G0319 Durio zibethinus HOM05D003020 ORTHO05D003226 1.2e-16 91.3 275 32.7
TWI38G1817 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 3.6e-16 89.7 250 32.8
FvH4_7g20060 Fragaria vesca HOM05D003020 ORTHO05D003226 4.6e-16 89.4 269 33.1
COL.COLO4_23725 Corchorus olitorius HOM05D003020 ORTHO05D003226 6.1e-16 89.0 280 30.4
FAN06G2932 Fragaria x ananassa HOM05D003020 ORTHO05D003226 6.1e-16 89.0 269 32.0
SalBow4G1965 Salvia bowleyana HOM05D003020 ORTHO05D003226 6.1e-16 89.0 247 32.4
Gohir.D06G174600 Gossypium hirsutum HOM05D003020 ORTHO05D003226 7.9e-16 88.6 265 30.6
Actinidia02961 Actinidia chinensis HOM05D003020 ORTHO05D003226 1.4e-15 87.8 272 34.6
Nn2g12774 Nelumbo nucifera HOM05D003020 ORTHO05D003226 1.4e-15 87.8 267 29.2
TPR.G16980 Trifolium pratense HOM05D003020 ORTHO05D003226 1.4e-15 87.8 276 32.2
Gorai.010G204300 Gossypium raimondii HOM05D003020 ORTHO05D003226 2.3e-15 87.0 265 30.9
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.9e-15 86.3 277 30.0
FAN01G0050 Fragaria x ananassa HOM05D003020 ORTHO05D003226 8.8e-15 85.1 268 31.3
FAN01G2565 Fragaria x ananassa HOM05D003020 ORTHO05D003226 8.8e-15 85.1 268 31.3
Peaxi162Scf00851g00012 Petunia axillaris HOM05D012114 ORTHO05D014153 8.8e-15 85.1 235 29.8
Glyma.20G178000 Glycine max HOM05D003020 ORTHO05D003226 2.0e-14 84.0 264 34.8
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.0e-14 84.0 262 33.6
Lj1C921T2 Lonicera japonica HOM05D003020 ORTHO05D003226 2.5e-14 83.6 243 33.3
Phvul.007G092400 Phaseolus vulgaris HOM05D003020 ORTHO05D003226 2.5e-14 83.6 268 34.3
Gohir.A06G178400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 4.3e-14 82.8 265 30.6
Psat6g184920 Pisum sativum HOM05D003020 ORTHO05D003226 4.3e-14 82.8 261 35.2
TAR636G2901 Trochodendron aralioides HOM05D003020 ORTHO05D003226 4.3e-14 82.8 268 32.8
Rhsim09G0153700 Rhododendron simsii HOM05D003020 ORTHO05D003226 7.4e-14 82.0 227 36.6
Rhsim09G0153900 Rhododendron simsii HOM05D003020 ORTHO05D003226 9.7e-14 81.6 218 36.7
Migut.F01762 Erythranthe guttata HOM05D003020 ORTHO05D003226 1.3e-13 81.3 264 29.2
Lj1C921T4 Lonicera japonica HOM05D003020 ORTHO05D003226 1.7e-13 80.9 209 30.6
Rhsim09G0153800 Rhododendron simsii HOM05D003020 ORTHO05D003226 1.7e-13 80.9 227 35.2
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.7e-13 80.9 268 32.1
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.2e-13 80.5 241 33.2
Actinidia02960 Actinidia chinensis HOM05D003020 ORTHO05D003226 2.8e-13 80.1 267 32.2
Nitab4.5_0000534g0080 Nicotiana tabacum HOM05D012114 ORTHO05D014153 2.8e-13 80.1 247 28.7
Migut.F01988 Erythranthe guttata HOM05D003020 ORTHO05D003226 3.7e-13 79.7 255 31.0
Nitab4.5_0000233g0290 Nicotiana tabacum HOM05D012114 ORTHO05D014153 3.7e-13 79.7 268 28.0
PGR044G1573 Punica granatum HOM05D003020 ORTHO05D003226 3.7e-13 79.7 282 29.4
Manes.10G043500 Manihot esculenta HOM05D003020 ORTHO05D003226 4.8e-13 79.3 253 32.4
Actinidia07721 Actinidia chinensis HOM05D003020 ORTHO05D003226 3.1e-12 76.6 279 30.1
Ciclev10033392m.g Citrus clementina HOM05D003020 ORTHO05D003226 5.3e-12 75.9 152 41.4
Eucgr.J01114 Eucalyptus grandis HOM05D003020 ORTHO05D003226 5.3e-12 75.9 235 31.1
Sed0002867 Sechium edule HOM05D003020 ORTHO05D003226 5.3e-12 75.9 251 29.9
CiPaw.08G036400 Carya illinoinensis HOM05D003020 ORTHO05D003226 2.0e-11 73.9 258 32.2
Rhsim09G0153600 Rhododendron simsii HOM05D003020 ORTHO05D003226 2.6e-11 73.6 227 34.4
Oeu063752.1 Olea europaea HOM05D003020 ORTHO05D003226 1.0e-10 71.6 229 29.7
Cc02_g11380 Coffea canephora HOM05D003020 ORTHO05D003226 1.7e-10 70.9 274 28.5
MELO3C025508.2 Cucumis melo HOM05D003020 ORTHO05D003226 1.7e-10 70.9 243 29.2
Nitab4.5_0000233g0300 Nicotiana tabacum HOM05D012114 ORTHO05D014153 1.7e-10 70.9 245 28.6
Lalb_Chr02g0141941 Lupinus albus HOM05D003020 ORTHO05D003226 2.2e-10 70.5 260 31.9
Actinidia07720 Actinidia chinensis HOM05D000283 ORTHO05D003226 2.9e-10 70.1 229 31.0
Eucgr.J01120 Eucalyptus grandis HOM05D003020 ORTHO05D003226 2.9e-10 70.1 295 30.2
Rhsim01G0004800 Rhododendron simsii HOM05D003020 ORTHO05D003226 2.9e-10 70.1 258 30.2
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.9e-10 70.1 271 29.5
Actinidia04141 Actinidia chinensis HOM05D003020 ORTHO05D003226 3.8e-10 69.7 251 29.5
Actinidia02963 Actinidia chinensis HOM05D003020 ORTHO05D003226 5.0e-10 69.3 227 30.4
CsaV3_5G025940 Cucumis sativus L. HOM05D003020 ORTHO05D003226 6.5e-10 68.9 241 29.0
Nitab4.5_0000534g0070 Nicotiana tabacum HOM05D012114 ORTHO05D014153 8.5e-10 68.6 245 26.5
Rhsim09G0153500 Rhododendron simsii HOM05D003020 ORTHO05D003226 1.1e-09 68.2 256 30.9
PGR044G1634 Punica granatum HOM05D003020 ORTHO05D003226 1.4e-09 67.8 282 29.1
FAN10G4329 Fragaria x ananassa HOM05D003020 ORTHO05D003226 3.2e-09 66.6 229 31.4
Cfa013505 Carpinus fangiana HOM05D003020 ORTHO05D003226 5.5e-09 65.9 255 29.8
DCAR_019134 Daucus carota HOM05D003020 ORTHO05D003226 5.5e-09 65.9 247 30.4
Glyma.20G083700 Glycine max HOM05D003020 ORTHO05D003226 7.2e-09 65.5 245 30.2
Aqoxy7G03070 Aquilegia oxysepala HOM05D003020 ORTHO05D003226 9.4e-09 65.1 281 29.2
Haze_22098 Corylus avellana HOM05D003020 ORTHO05D003226 9.4e-09 65.1 259 30.1
ClCG09G020480 Citrullus lanatus HOM05D003020 ORTHO05D003226 1.2e-08 64.7 272 26.8
Lj5g0002057 Lotus japonicus HOM05D003020 ORTHO05D003226 1.2e-08 64.7 268 31.0
Ca_21174_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 1.6e-08 64.3 280 26.4
Ca_21223_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 1.6e-08 64.3 280 26.4
Glyma.17G063300 Glycine max HOM05D003020 ORTHO05D003226 2.1e-08 63.9 243 30.5
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.7e-08 63.5 254 29.9
VMungo1215G0012 Vigna mungo HOM05D003020 ORTHO05D003226 2.7e-08 63.5 244 27.5
arahy.Tifrunner.gnm1.ann1.4MY83E Arachis hypogaea HOM05D003020 ORTHO05D003226 4.7e-08 62.8 257 30.7
Psat0s2889g0080 Pisum sativum HOM05D003020 ORTHO05D003226 6.1e-08 62.4 289 26.3
Peaxi162Scf00108g00165 Petunia axillaris HOM05D012114 ORTHO05D014153 1.4e-07 61.2 244 26.6
Lj1C921T3 Lonicera japonica HOM05D003020 ORTHO05D003226 1.8e-07 60.8 206 31.1
HanXRQChr08g0219501 Helianthus annuus HOM05D003020 ORTHO05D003226 2.3e-07 60.5 248 29.0
Lj1P920T18 Lonicera japonica HOM05D003020 ORTHO05D003226 2.3e-07 60.5 198 30.8
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 3.0e-07 60.1 252 29.8
RcHm_v2.0_Chr4g0402471 Rosa chinensis HOM05D003020 ORTHO05D003226 3.0e-07 60.1 273 25.6
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.9e-07 59.7 253 29.6
Phvul.003G146000 Phaseolus vulgaris HOM05D003020 ORTHO05D003226 5.1e-07 59.3 233 27.0
Actinidia26625 Actinidia chinensis HOM05D003020 ORTHO05D003226 6.7e-07 58.9 82 45.1
Dinv31353 Davidia involucrata HOM05D003020 ORTHO05D003226 8.8e-07 58.5 298 29.2
Prupe.1G086100 Prunus persica HOM05D003020 ORTHO05D003226 8.8e-07 58.5 270 25.9
Oeu042166.1 Olea europaea HOM05D003020 ORTHO05D003226 1.1e-06 58.2 266 28.6
Dinv41250 Davidia involucrata HOM05D003020 ORTHO05D003226 1.5e-06 57.8 274 26.3
Eucgr.J01115 Eucalyptus grandis HOM05D003020 ORTHO05D003226 1.5e-06 57.8 121 35.5
COL.COLO4_35897 Corchorus olitorius HOM05D003020 ORTHO05D003226 2.6e-06 57.0 275 26.9
FAN07G1960 Fragaria x ananassa HOM05D003020 ORTHO05D003226 2.6e-06 57.0 268 25.7
Lalb_Chr12g0199391 Lupinus albus HOM05D003020 ORTHO05D003226 2.6e-06 57.0 248 28.2
CiPaw.07G192300 Carya illinoinensis HOM05D003020 ORTHO05D003226 3.3e-06 56.6 276 29.7
Duzib170G0355 Durio zibethinus HOM05D003020 ORTHO05D003226 3.3e-06 56.6 252 27.8
Lsat_1_v5_gn_2_113960 Lactuca sativa HOM05D030802 ORTHO05D003226 3.3e-06 56.6 231 27.7
Manes.14G153300 Manihot esculenta HOM05D003020 ORTHO05D003226 3.3e-06 56.6 264 24.6
Nitab4.5_0000534g0060 Nicotiana tabacum HOM05D003020 ORTHO05D003226 3.3e-06 56.6 290 25.2
QL02p097728 Quercus lobata HOM05D003020 ORTHO05D003226 4.4e-06 56.2 269 27.5
MD16G1257900 Malus domestica HOM05D003020 ORTHO05D003226 7.4e-06 55.5 264 26.9
Cpa.g.sc95.49 Carica papaya HOM05D003020 ORTHO05D003226 9.7e-06 55.1 267 27.7
Gorai.004G031500 Gossypium raimondii HOM05D003020 ORTHO05D003226 9.7e-06 55.1 244 30.3
Potri.010G218500 Populus trichocarpa HOM05D031226 ORTHO05D003226 9.7e-06 55.1 92 38.0


User provided reference genes

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