Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 3.3e-56 221.5 111 100.0
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 2.1e-47 192.2 109 88.1
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 5.8e-45 184.1 111 83.8
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 1.4e-43 179.5 109 79.8
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 1.9e-43 179.1 108 83.3
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 4.6e-42 174.5 108 80.6
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 4.6e-42 174.5 109 78.9
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 4.6e-42 174.5 108 83.3
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 4.6e-42 174.5 109 80.7
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 6.0e-42 174.1 111 79.3
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 1.0e-41 173.3 110 79.1
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 1.3e-41 172.9 109 78.0
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 3.0e-41 171.8 111 77.5
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 3.9e-41 171.4 109 81.7
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 5.1e-41 171.0 109 78.9
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 8.7e-41 170.2 109 77.1
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 1.5e-40 169.5 98 83.7
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 2.5e-40 168.7 111 78.4
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 3.3e-40 168.3 109 78.0
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 7.3e-40 167.2 111 77.5
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 9.6e-40 166.8 108 75.0
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 9.6e-40 166.8 109 77.1
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 9.6e-40 166.8 111 76.6
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 1.3e-39 166.4 109 77.1
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 1.6e-39 166.0 104 76.9
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 1.6e-39 166.0 109 77.1
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 1.6e-39 166.0 108 74.1
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 2.1e-39 165.6 111 75.7
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 3.6e-39 164.9 111 73.0
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 3.6e-39 164.9 109 77.1
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 6.2e-39 164.1 109 74.3
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 6.2e-39 164.1 109 73.4
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 6.2e-39 164.1 109 74.3
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 8.1e-39 163.7 109 74.3
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 1.1e-38 163.3 108 71.3
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 1.4e-38 162.9 109 72.5
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 1.8e-38 162.5 111 71.2
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 1.8e-38 162.5 109 75.2
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.8e-38 162.5 109 74.3
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 1.8e-38 162.5 109 73.4
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 3.1e-38 161.8 106 76.4
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 4.0e-38 161.4 104 75.0
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 5.3e-38 161.0 108 70.4
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 6.9e-38 160.6 111 73.9
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 9.0e-38 160.2 107 72.0
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 9.0e-38 160.2 111 70.3
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 9.0e-38 160.2 109 75.2
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 9.0e-38 160.2 109 75.2
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 1.2e-37 159.8 109 75.2
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 1.5e-37 159.5 111 73.0
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 2.0e-37 159.1 106 75.5
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 3.4e-37 158.3 109 72.5
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 4.5e-37 157.9 101 75.2
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 4.5e-37 157.9 111 70.3
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 1.3e-36 156.4 107 72.9
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 1.3e-36 156.4 106 72.6
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 2.9e-36 155.2 108 74.1
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 3.8e-36 154.8 126 63.5
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 4.9e-36 154.5 112 70.5
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 1.4e-35 152.9 109 73.4
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 1.9e-35 152.5 110 69.1
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 2.4e-35 152.1 111 68.5
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 2.4e-35 152.1 109 67.0
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 4.2e-35 151.4 104 70.2
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 4.2e-35 151.4 111 68.5
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 4.2e-35 151.4 101 72.3
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 4.2e-35 151.4 101 73.3
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 5.4e-35 151.0 107 69.2
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 2.1e-34 149.1 104 70.2
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 2.1e-34 149.1 113 67.3
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 2.7e-34 148.7 109 70.6
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 3.5e-34 148.3 106 71.7
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 3.5e-34 148.3 111 67.6
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 4.6e-34 147.9 112 66.1
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 6.0e-34 147.5 104 70.2
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 6.0e-34 147.5 104 68.3
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 6.0e-34 147.5 106 71.7
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 7.9e-34 147.1 111 65.8
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 1.0e-33 146.7 109 67.0
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 1.3e-33 146.4 109 67.0
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 1.8e-33 146.0 97 73.2
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 1.8e-33 146.0 113 63.7
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 1.8e-33 146.0 133 57.9
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 2.3e-33 145.6 102 70.6
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 3.0e-33 145.2 111 64.9
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 6.7e-33 144.1 103 68.0
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 6.7e-33 144.1 111 64.0
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 1.1e-32 143.3 109 63.3
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 1.1e-32 143.3 110 64.5
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 1.5e-32 142.9 109 64.2
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 2.5e-32 142.1 111 64.9
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 3.3e-32 141.7 108 64.8
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 3.3e-32 141.7 108 64.8
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 4.3e-32 141.4 108 63.9
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 4.3e-32 141.4 106 64.2
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 7.4e-32 140.6 103 66.0
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 9.6e-32 140.2 111 64.0
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 9.6e-32 140.2 109 64.2
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 9.6e-32 140.2 109 64.2
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 1.3e-31 139.8 111 64.9
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 4.8e-31 137.9 115 61.7
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 4.8e-31 137.9 115 61.7
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 8.1e-31 137.1 103 64.1
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 8.1e-31 137.1 102 64.7
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.4e-30 136.3 115 60.9
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.4e-30 136.3 115 60.9
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 2.4e-30 135.6 105 64.8
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 2.4e-30 135.6 105 64.8
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 2.4e-30 135.6 103 63.1
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 3.1e-30 135.2 105 61.9
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 4.0e-30 134.8 103 63.1
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 4.0e-30 134.8 103 63.1
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 4.0e-30 134.8 103 63.1
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 4.5e-29 131.3 100 67.0
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 4.5e-29 131.3 106 60.4
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 1.1e-27 126.7 105 59.0
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 4.2e-27 124.8 106 63.2
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 1.2e-26 123.2 105 61.0
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 3.9e-25 118.2 105 58.1
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 6.2e-23 110.9 109 56.9
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 1.1e-22 110.2 85 67.1
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 1.5e-21 106.3 99 56.6
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 2.9e-20 102.1 86 64.0
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 3.8e-20 101.7 58 84.5
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 1.9e-19 99.4 103 47.6
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 2.7e-18 95.5 102 46.1
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 6.0e-18 94.4 74 63.5
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 7.4e-16 87.4 99 46.5
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 9.7e-16 87.0 73 63.0
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 1.1e-14 83.6 65 58.5
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 1.4e-14 83.2 74 55.4
Prupe.2G218400 Prunus persica HOM05D005755 ORTHO05D007006 1.4e-14 83.2 109 49.5
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 2.0e-13 79.3 73 54.8
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 7.6e-13 77.4 77 51.9
ClCG08G001190 Citrullus lanatus HOM05D005755 ORTHO05D007006 3.6e-10 68.6 59 61.0
CBR_g23899 Chara braunii HOM05D005755 ORTHO05D007006 5.1e-09 64.7 103 37.9
SEGI_15077 Sequoiadendron giganteum HOM05D002017 ORTHO05D007006 8.8e-09 63.9 55 54.5


User provided reference genes

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