Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.520 Acer truncatum HOM05D008199 ORTHO05D010334 4.2e-26 120.6 59 100.0
Cpa.g.sc1.358 Carica papaya HOM05D008199 ORTHO05D010334 7.9e-17 89.7 54 77.8
Actinidia02971 Actinidia chinensis HOM05D008199 ORTHO05D010334 1.8e-16 88.6 56 75.0
CSS0014372 Camellia sinensis var. sinensis HOM05D008199 ORTHO05D010334 1.8e-16 88.6 54 74.1
Manes.07G111800 Manihot esculenta HOM05D008199 ORTHO05D010334 3.0e-16 87.8 53 79.2
Dinv31422 Davidia involucrata HOM05D000953 ORTHO05D000231 3.9e-16 87.4 54 75.9
Gohir.A05G350700 Gossypium hirsutum HOM05D008199 ORTHO05D010334 5.1e-16 87.0 55 70.9
Gorai.012G069200 Gossypium raimondii HOM05D008199 ORTHO05D010334 5.1e-16 87.0 55 70.9
TWI38G1458 Tripterygium wilfordii HOM05D008199 ORTHO05D010334 5.1e-16 87.0 51 78.4
TAR633G0052 Trochodendron aralioides HOM05D008199 ORTHO05D010334 1.5e-15 85.5 52 73.1
Actinidia07733 Actinidia chinensis HOM05D008199 ORTHO05D010334 1.9e-15 85.1 55 69.1
Actinidia34336 Actinidia chinensis HOM05D008199 ORTHO05D010334 1.9e-15 85.1 55 69.1
Nn2g10469 Nelumbo nucifera HOM05D008199 ORTHO05D010334 2.5e-15 84.7 48 79.2
THA.LOC104824262 Tarenaya hassleriana HOM05D008199 ORTHO05D010334 3.3e-15 84.3 49 73.5
Gohir.D04G061900 Gossypium hirsutum HOM05D008199 ORTHO05D010334 7.4e-15 83.2 55 67.3
Thecc.10G048500 Theobroma cacao HOM05D008199 ORTHO05D010334 7.4e-15 83.2 45 82.2
Ciclev10033682m.g Citrus clementina HOM05D008199 ORTHO05D010334 9.7e-15 82.8 46 82.6
PGSC0003DMG400029465 Solanum tuberosum HOM05D008199 ORTHO05D010334 1.3e-14 82.4 55 70.9
ECA238G2613 Erigeron canadensis HOM05D008199 ORTHO05D010334 2.2e-14 81.6 56 66.1
Lsat_1_v5_gn_2_117560 Lactuca sativa HOM05D008199 ORTHO05D010334 2.2e-14 81.6 54 68.5
Oeu021440.1 Olea europaea HOM05D008199 ORTHO05D010334 2.8e-14 81.3 54 70.4
Potri.008G051100 Populus trichocarpa HOM05D008199 ORTHO05D010334 2.8e-14 81.3 54 72.2
Aqoxy5G00469 Aquilegia oxysepala HOM05D008199 ORTHO05D010334 3.7e-14 80.9 53 75.5
BcaC02g12078 Brassica carinata HOM05D008199 ORTHO05D010334 3.7e-14 80.9 59 66.1
A05p06880 Brassica napus HOM05D008199 ORTHO05D010334 3.7e-14 80.9 59 66.1
BraA05t19653Z Brassica rapa HOM05D008199 ORTHO05D010334 3.7e-14 80.9 59 66.1
C04p08150 Brassica napus HOM05D008199 ORTHO05D010334 6.3e-14 80.1 59 66.1
BolC4t22425H Brassica oleracea HOM05D008199 ORTHO05D010334 6.3e-14 80.1 59 66.1
Carub.0004s2158 Capsella rubella HOM05D008199 ORTHO05D010334 6.3e-14 80.1 50 66.0
Hma1.2p1_0727F.1_g209100 Hydrangea macrophylla HOM05D008199 ORTHO05D010334 8.2e-14 79.7 54 63.0
Sc20g0002530 Simmondsia chinensis HOM05D008199 ORTHO05D010334 8.2e-14 79.7 52 69.2
CARHR134390 Cardamine hirsuta HOM05D008199 ORTHO05D010334 1.1e-13 79.3 50 66.0
DCAR_027672 Daucus carota HOM05D008199 ORTHO05D010334 1.1e-13 79.3 55 69.1
Aa31LG5G20100 Aethionema arabicum HOM05D008199 ORTHO05D010334 1.4e-13 79.0 57 63.2
CAN.G74.25 Capsicum annuum HOM05D008199 ORTHO05D010334 1.4e-13 79.0 56 66.1
CiPaw.01G282700 Carya illinoinensis HOM05D008199 ORTHO05D010334 1.4e-13 79.0 53 71.7
PGR142G1326 Punica granatum HOM05D008199 ORTHO05D010334 1.4e-13 79.0 52 65.4
ClCG09G020150 Citrullus lanatus HOM05D008199 ORTHO05D010334 1.8e-13 78.6 52 71.2
Prupe.2G230900 Prunus persica HOM05D008199 ORTHO05D010334 1.8e-13 78.6 55 63.6
GSVIVG01016602001 Vitis vinifera HOM05D000953 ORTHO05D000231 2.4e-13 78.2 53 66.0
RcHm_v2.0_Chr1g0366131 Rosa chinensis HOM05D008199 ORTHO05D010334 3.1e-13 77.8 51 68.6
Sp4g21800 Schrenkiella parvula HOM05D008199 ORTHO05D010334 4.1e-13 77.4 50 66.0
Sed0003138 Sechium edule HOM05D008199 ORTHO05D010334 5.3e-13 77.0 46 73.9
Cfa001517 Carpinus fangiana HOM05D008199 ORTHO05D010334 6.9e-13 76.6 41 82.9
COL.COLO4_14948 Corchorus olitorius HOM05D008199 ORTHO05D010334 6.9e-13 76.6 57 59.6
Lj5g0016979 Lotus japonicus HOM05D008199 ORTHO05D010334 6.9e-13 76.6 52 67.3
Glyma.20G099000 Glycine max HOM05D008199 ORTHO05D010334 9.1e-13 76.3 47 72.3
Medtr1g115355 Medicago truncatula HOM05D008199 ORTHO05D010334 1.2e-12 75.9 41 80.5
AL4G36900 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 1.5e-12 75.5 48 64.6
AL4G36920 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 3.4e-12 74.3 48 62.5
AT2G39500 Arabidopsis thaliana HOM05D008199 ORTHO05D010334 4.5e-12 73.9 48 60.4
CANSAT11G0099 Cannabis sativa HOM05D008199 ORTHO05D010334 4.5e-12 73.9 52 69.2
MD01G1123400 Malus domestica HOM05D008199 ORTHO05D010334 5.9e-12 73.6 46 69.6
Psat6g236360 Pisum sativum HOM05D008199 ORTHO05D010334 5.9e-12 73.6 41 78.0
Migut.F01496 Erythranthe guttata HOM05D008199 ORTHO05D010334 1.0e-11 72.8 57 64.9
Manes.10G036000 Manihot esculenta HOM05D008199 ORTHO05D010334 1.0e-11 72.8 40 77.5
Lalb_Chr02g0144051 Lupinus albus HOM05D008199 ORTHO05D010334 2.2e-11 71.6 51 64.7
PSO339G4122 Papaver somniferum HOM05D008199 ORTHO05D010334 2.2e-11 71.6 41 75.6
Zm00001eb362160 Zea mays HOM05D008199 ORTHO05D010334 2.9e-11 71.2 56 58.9
Duzib128G0439 Durio zibethinus HOM05D008199 ORTHO05D010334 8.5e-11 69.7 50 64.0
Phvul.007G011200 Phaseolus vulgaris HOM05D008199 ORTHO05D010334 1.1e-10 69.3 41 73.2
SEGI_29944 Sequoiadendron giganteum HOM05D008199 ORTHO05D010334 5.5e-10 67.0 56 57.1
MBI05_g35603_MAGBIO Magnolia biondii HOM05D008199 ORTHO05D010334 2.1e-09 65.1 46 58.7
HanXRQChr16g0507891 Helianthus annuus HOM05D008199 ORTHO05D010334 2.2e-06 55.1 54 51.9
SHI12594 Sapria himalayana HOM05D008199 ORTHO05D010334 2.2e-06 55.1 66 42.4
Pp3c9_50 Physcomitrium patens HOM05D008199 ORTHO05D010334 4.8e-06 53.9 38 60.5


User provided reference genes

Program Settings