Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 1.1e-170 603.2 308 100.0
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 4.0e-168 594.7 308 98.4
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 2.3e-131 472.6 309 75.4
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 4.0e-128 461.8 307 75.9
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 3.5e-124 448.7 309 73.1
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 1.3e-123 446.8 307 73.0
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 1.3e-123 446.8 307 73.3
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 4.3e-122 441.8 309 72.8
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 9.5e-122 440.7 320 71.6
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 2.8e-121 439.1 307 70.0
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 1.1e-120 437.2 309 72.2
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 1.4e-120 436.8 309 70.2
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 1.4e-120 436.8 309 69.6
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.4e-120 436.0 309 71.8
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 3.1e-120 435.6 309 71.8
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 6.8e-120 434.5 309 71.5
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 1.5e-119 433.3 309 69.3
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 3.4e-119 432.2 309 69.9
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 3.4e-119 432.2 309 71.5
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 9.9e-119 430.6 309 68.9
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.2e-118 429.5 309 71.2
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 6.4e-118 427.9 307 69.7
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 1.1e-117 427.2 307 69.4
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 1.1e-117 427.2 307 69.7
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 1.9e-117 426.4 307 69.4
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 3.2e-117 425.6 309 68.6
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 7.1e-117 424.5 307 67.8
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 1.3e-115 420.2 306 66.7
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 6.6e-115 417.9 306 66.7
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 4.3e-114 415.2 307 66.1
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.2e-113 413.7 309 68.9
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 1.2e-113 413.7 306 66.7
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 2.1e-113 412.9 306 64.4
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 2.1e-113 412.9 306 64.7
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 3.6e-113 412.1 309 68.0
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 8.1e-113 411.0 306 65.7
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 3.1e-112 409.1 307 65.5
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 5.2e-112 408.3 311 67.5
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 5.2e-112 408.3 311 67.5
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 3.4e-111 405.6 429 53.6
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 1.3e-110 403.7 306 64.4
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 2.4e-109 399.4 308 65.3
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 9.3e-109 397.5 306 63.4
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 3.5e-108 395.6 355 59.2
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 1.3e-107 393.7 351 61.3
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 1.9e-106 389.8 273 72.5
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 3.6e-105 385.6 309 62.1
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 1.1e-104 384.0 307 61.2
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 1.5e-103 380.2 307 59.6
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 9.9e-103 377.5 307 59.9
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 2.2e-102 376.3 309 61.2
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 1.9e-101 373.2 309 59.2
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 1.2e-100 370.5 307 58.0
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 1.6e-100 370.2 307 58.0
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 3.5e-100 369.0 305 60.0
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 4.6e-100 368.6 306 58.2
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 1.0e-99 367.5 305 59.3
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 5.1e-99 365.2 308 59.4
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 6.7e-99 364.8 308 58.4
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 8.7e-99 364.4 294 61.2
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 3.3e-98 362.5 307 58.3
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 5.6e-98 361.7 309 59.2
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 1.6e-97 360.1 307 58.3
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 4.0e-96 355.5 309 57.6
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 3.4e-95 352.4 307 57.0
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 8.4e-94 347.8 306 55.9
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 1.4e-93 347.1 360 53.3
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 2.4e-93 346.3 294 57.8
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 2.1e-92 343.2 308 57.8
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 1.9e-90 336.7 306 56.9
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 2.1e-89 333.2 308 54.5
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 2.8e-89 332.8 240 69.6
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 8.2e-89 331.3 308 54.2
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 8.2e-89 331.3 308 54.2
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 3.1e-88 329.3 308 54.9
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 5.3e-88 328.6 303 54.1
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 6.9e-88 328.2 314 53.8
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 1.3e-86 323.9 304 52.0
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 6.5e-86 321.6 308 51.3
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 1.1e-85 320.9 297 56.9
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 1.9e-85 320.1 237 65.4
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 2.5e-85 319.7 308 52.3
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 9.3e-85 317.8 308 51.9
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 6.0e-84 315.1 308 51.9
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 6.0e-84 315.1 293 53.9
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 8.7e-83 311.2 243 66.7
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 3.3e-82 309.3 309 52.1
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 4.3e-82 308.9 268 61.2
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 4.3e-82 308.9 309 52.1
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 9.7e-82 307.8 268 60.8
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 2.8e-81 306.2 250 62.4
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 9.0e-80 301.2 291 53.3
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 1.4e-75 287.3 221 62.4
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 5.3e-72 275.4 325 48.9
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 9.4e-69 264.6 173 77.5
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 2.1e-68 263.5 302 46.7
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 7.9e-68 261.5 238 53.8
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 5.1e-67 258.8 293 45.4
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 2.0e-66 256.9 219 61.2
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 1.4e-59 234.2 242 50.8
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 5.2e-59 232.3 231 53.7
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 3.6e-52 209.5 240 49.2
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 2.1e-44 183.7 291 35.7
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 2.0e-42 177.2 114 71.1
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 1.5e-34 151.0 275 30.5
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 6.6e-30 135.6 113 60.2
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 2.4e-24 117.1 67 80.6
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 2.4e-24 117.1 64 84.4
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 9.2e-24 115.2 67 79.1
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 6.6e-22 109.0 63 76.2
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 8.6e-22 108.6 67 71.6
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 1.6e-12 77.8 63 58.7


User provided reference genes

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