Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.2374 Acer truncatum HOM05D004734 ORTHO05D006019 6.4e-158 560.8 313 100.0
Atru.chr6.3288 Acer truncatum HOM05D004734 ORTHO05D006019 2.8e-89 332.8 182 96.2
Atru.chr6.3273 Acer truncatum HOM05D004734 ORTHO05D006019 8.3e-89 331.3 182 95.6
Potri.002G223600 Populus trichocarpa HOM05D004734 ORTHO05D006019 4.0e-67 259.2 227 60.8
Sabra02G0171200 Salix brachista HOM05D004734 ORTHO05D006019 6.8e-67 258.5 227 60.4
Ciclev10014379m.g Citrus clementina HOM05D004734 ORTHO05D006019 5.4e-64 248.8 188 68.6
Cfa014305 Carpinus fangiana HOM05D004734 ORTHO05D006019 1.7e-62 243.8 198 63.6
TWI75G1245 Tripterygium wilfordii HOM05D004734 ORTHO05D006019 1.7e-62 243.8 182 67.0
Manes.12G058300 Manihot esculenta HOM05D004734 ORTHO05D006019 6.6e-62 241.9 223 58.7
COL.COLO4_07254 Corchorus olitorius HOM05D004734 ORTHO05D006019 5.2e-59 232.3 186 62.4
MD09G1116200 Malus domestica HOM05D004734 ORTHO05D006019 8.9e-59 231.5 191 61.3
CiPaw.04G108800 Carya illinoinensis HOM05D004734 ORTHO05D006019 1.2e-58 231.1 191 62.8
Glyma.02G266800 Glycine max HOM05D004734 ORTHO05D006019 1.7e-57 227.3 188 62.2
MD17G1107900 Malus domestica HOM05D004734 ORTHO05D006019 4.9e-57 225.7 199 57.8
CARHR126840 Cardamine hirsuta HOM05D004734 ORTHO05D006019 1.1e-56 224.6 182 62.6
Eucgr.A01088 Eucalyptus grandis HOM05D004734 ORTHO05D006019 1.9e-56 223.8 186 61.8
Prupe.3G208500 Prunus persica HOM05D004734 ORTHO05D006019 1.9e-56 223.8 191 59.2
Carub.0004s1431 Capsella rubella HOM05D004734 ORTHO05D006019 2.4e-56 223.4 182 61.5
AL4G28410 Arabidopsis lyrata HOM05D004734 ORTHO05D006019 4.2e-56 222.6 182 61.5
Duzib138G1622 Durio zibethinus HOM05D004734 ORTHO05D006019 4.2e-56 222.6 186 62.4
TPR.G6822 Trifolium pratense HOM05D004734 ORTHO05D006019 5.4e-56 222.2 188 60.1
AT2G32900 Arabidopsis thaliana HOM05D004734 ORTHO05D006019 7.1e-56 221.9 182 61.0
THA.LOC104826129 Tarenaya hassleriana HOM05D004734 ORTHO05D006019 7.1e-56 221.9 182 61.0
Gohir.D07G174400 Gossypium hirsutum HOM05D004734 ORTHO05D006019 9.2e-56 221.5 182 62.6
QL01p037797 Quercus lobata HOM05D004734 ORTHO05D006019 2.1e-55 220.3 196 57.1
Haze_12752 Corylus avellana HOM05D004734 ORTHO05D006019 3.5e-55 219.5 179 63.7
FAN02G4553 Fragaria x ananassa HOM05D004734 ORTHO05D006019 3.5e-55 219.5 185 61.1
Gorai.001G195000 Gossypium raimondii HOM05D004734 ORTHO05D006019 3.5e-55 219.5 187 60.4
Aa31LG5G4570 Aethionema arabicum HOM05D004734 ORTHO05D006019 4.6e-55 219.2 180 62.2
FAN14G4409 Fragaria x ananassa HOM05D004734 ORTHO05D006019 4.6e-55 219.2 185 62.2
CANSAT64G0097 Cannabis sativa HOM05D004734 ORTHO05D006019 6.0e-55 218.8 187 59.9
FAN09G1456 Fragaria x ananassa HOM05D004734 ORTHO05D006019 1.0e-54 218.0 185 60.5
RcHm_v2.0_Chr2g0157781 Rosa chinensis HOM05D004734 ORTHO05D006019 1.0e-54 218.0 185 60.5
Sp4g15270 Schrenkiella parvula HOM05D004734 ORTHO05D006019 1.0e-54 218.0 182 60.4
FAN05G4875 Fragaria x ananassa HOM05D004734 ORTHO05D006019 1.7e-54 217.2 185 61.1
ClCG02G018160 Citrullus lanatus HOM05D004734 ORTHO05D006019 3.0e-54 216.5 191 56.0
Duzib211G0196 Durio zibethinus HOM05D004734 ORTHO05D006019 3.9e-54 216.1 223 52.5
Glyma.14G050700 Glycine max HOM05D004734 ORTHO05D006019 5.1e-54 215.7 182 61.5
Thhalv10016293m.g Eutrema salsugineum HOM05D004734 ORTHO05D006019 1.1e-53 214.5 183 60.1
Sed0026816 Sechium edule HOM05D004734 ORTHO05D006019 1.5e-53 214.2 191 56.5
Phvul.008G215200 Phaseolus vulgaris HOM05D004734 ORTHO05D006019 1.9e-53 213.8 188 60.1
BcaC01g05869 Brassica carinata HOM05D004734 ORTHO05D006019 3.3e-53 213.0 182 58.8
C03p21580 Brassica napus HOM05D004734 ORTHO05D006019 3.3e-53 213.0 182 58.8
BolC3t14542H Brassica oleracea HOM05D004734 ORTHO05D006019 3.3e-53 213.0 182 58.8
MELO3C019721.2 Cucumis melo HOM05D004734 ORTHO05D006019 3.6e-52 209.5 185 54.6
A03p18530 Brassica napus HOM05D004734 ORTHO05D006019 6.2e-52 208.8 183 59.0
BraA03t11112Z Brassica rapa HOM05D004734 ORTHO05D006019 6.2e-52 208.8 183 59.0
BcaB01g03944 Brassica carinata HOM05D004734 ORTHO05D006019 6.9e-51 205.3 182 56.0
Ca_06067_v3 Cicer arietinum L. HOM05D004734 ORTHO05D006019 9.0e-51 204.9 188 56.9
VMungo0647G1710 Vigna mungo HOM05D004734 ORTHO05D006019 1.2e-50 204.5 188 57.4
Medtr5g084823 Medicago truncatula HOM05D004734 ORTHO05D006019 5.8e-50 202.2 192 56.2
PGR042G3679 Punica granatum HOM05D004734 ORTHO05D006019 7.6e-50 201.8 190 53.7
Lalb_Chr10g0105531 Lupinus albus HOM05D004734 ORTHO05D006019 6.4e-49 198.7 236 47.5
vmacro12148 Vaccinium macrocarpon HOM05D004734 ORTHO05D006019 9.3e-48 194.9 186 56.5
Cpa.g.sc132.37 Carica papaya HOM05D004734 ORTHO05D006019 2.1e-47 193.7 188 55.3
BcaB02g10504 Brassica carinata HOM05D004734 ORTHO05D006019 1.0e-46 191.4 182 56.0
Dinv08709 Davidia involucrata HOM05D004734 ORTHO05D006019 1.0e-46 191.4 212 49.1
Hma1.2p1_2840F.1_g329320 Hydrangea macrophylla HOM05D004734 ORTHO05D006019 2.3e-46 190.3 189 51.9
Actinidia09755 Actinidia chinensis HOM05D004734 ORTHO05D006019 1.1e-45 188.0 188 52.7
BraA05t20212Z Brassica rapa HOM05D004734 ORTHO05D006019 1.9e-45 187.2 182 53.8
TAR629G0221 Trochodendron aralioides HOM05D004734 ORTHO05D006019 1.9e-45 187.2 198 51.5
Nn1g07321 Nelumbo nucifera HOM05D004734 ORTHO05D006019 4.3e-45 186.0 235 42.6
Solyc05g043350.4 Solanum lycopersicum HOM05D004734 ORTHO05D006019 3.6e-44 183.0 186 46.2
BolC4t23215H Brassica oleracea HOM05D004734 ORTHO05D006019 4.8e-44 182.6 182 51.6
Lj8A131T30 Lonicera japonica HOM05D004734 ORTHO05D006019 4.8e-44 182.6 193 52.3
A05p12730 Brassica napus HOM05D004734 ORTHO05D006019 1.4e-43 181.0 182 52.2
CSS0018671 Camellia sinensis var. sinensis HOM05D004734 ORTHO05D006019 4.0e-43 179.5 186 51.6
Migut.A01159 Erythranthe guttata HOM05D004734 ORTHO05D006019 2.0e-42 177.2 202 47.0
Aqoxy2G03788 Aquilegia oxysepala HOM05D004734 ORTHO05D006019 4.5e-42 176.0 201 49.3
C04p16650 Brassica napus HOM05D004734 ORTHO05D006019 5.8e-42 175.6 182 50.0
SalBow7G0507 Salvia bowleyana HOM05D004734 ORTHO05D006019 7.6e-42 175.3 188 52.7
Cc00_g21460 Coffea canephora HOM05D004734 ORTHO05D006019 1.7e-41 174.1 189 48.7
arahy.Tifrunner.gnm1.ann1.LYY30L Arachis hypogaea HOM05D004734 ORTHO05D006019 1.1e-40 171.4 190 50.5
arahy.Tifrunner.gnm1.ann1.L0FFGY Arachis hypogaea HOM05D004734 ORTHO05D006019 1.4e-40 171.0 190 50.5
SHI10095 Sapria himalayana HOM05D004734 ORTHO05D006019 2.4e-40 170.2 177 50.3
CAN.G387.3 Capsicum annuum HOM05D004734 ORTHO05D006019 1.2e-39 167.9 186 44.6
Nitab4.5_0009060g0010 Nicotiana tabacum HOM05D004734 ORTHO05D006019 1.6e-39 167.5 191 43.5
Nitab4.5_0000006g0360 Nicotiana tabacum HOM05D004734 ORTHO05D006019 6.0e-39 165.6 191 42.9
PSO017G2150 Papaver somniferum HOM05D004734 ORTHO05D006019 2.3e-38 163.7 195 46.2
Lsat_1_v5_gn_7_94920 Lactuca sativa HOM05D004734 ORTHO05D006019 1.5e-37 161.0 217 41.5
DCAR_012916 Daucus carota HOM05D004734 ORTHO05D006019 1.9e-37 160.6 192 46.9
Peaxi162Scf00977g00315 Petunia axillaris HOM05D004734 ORTHO05D006019 2.5e-37 160.2 196 44.9
SGA_v2.0_scaffold73G24401 Striga asiatica HOM05D004734 ORTHO05D006019 2.1e-36 157.1 188 46.3
HPP92_028626 Vanilla planifolia HOM05D004734 ORTHO05D006019 2.8e-36 156.8 187 47.6
CDE07G0136 Ceratophyllum demersum HOM05D004734 ORTHO05D006019 8.1e-36 155.2 184 47.3
Rhsim06G0169400 Rhododendron simsii HOM05D004734 ORTHO05D006019 8.1e-36 155.2 157 52.9
HPP92_028624 Vanilla planifolia HOM05D004734 ORTHO05D006019 1.8e-35 154.1 187 47.1
HPP92_000196 Vanilla planifolia HOM05D004734 ORTHO05D006019 2.4e-35 153.7 191 46.6
HanXRQChr16g0508221 Helianthus annuus HOM05D004734 ORTHO05D006019 3.1e-35 153.3 192 44.3
AUR62017577 Chenopodium quinoa HOM05D004734 ORTHO05D006019 1.5e-34 151.0 192 45.8
AUR62015114 Chenopodium quinoa HOM05D004734 ORTHO05D006019 3.4e-34 149.8 192 45.8
HanXRQChr14g0438421 Helianthus annuus HOM05D004734 ORTHO05D006019 1.0e-33 148.3 191 46.1
Sc21g0001080 Simmondsia chinensis HOM05D004734 ORTHO05D006019 1.1e-32 144.8 187 46.5
Ah.01g001840 Amaranthus hybridus HOM05D004734 ORTHO05D006019 3.2e-32 143.3 193 43.0
MBI16_g26176_MAGBIO Magnolia biondii HOM05D004734 ORTHO05D006019 3.5e-31 139.8 188 45.2
EL10Ac9g22816 Beta vulgaris HOM05D004734 ORTHO05D006019 4.6e-31 139.4 187 43.3
Hund08442 Selenicereus undatus HOM05D004734 ORTHO05D006019 2.3e-30 137.1 186 42.5
unitig_8.g4608 Utricularia gibba HOM05D004734 ORTHO05D006019 3.0e-30 136.7 185 41.1
Oeu054514.1 Olea europaea HOM05D004734 ORTHO05D006019 6.7e-30 135.6 189 44.4
GSVIVG01030526001 Vitis vinifera HOM05D004734 ORTHO05D006019 1.2e-26 124.8 182 45.1
ATR1128G058 Amborella trichopoda HOM05D004734 ORTHO05D006019 1.4e-24 117.9 195 37.9
TPR.G25656 Trifolium pratense HOM05D004734 ORTHO05D006019 9.3e-24 115.2 113 52.2
HPP92_000155 Vanilla planifolia HOM05D004734 ORTHO05D006019 1.4e-16 91.3 192 35.4
RcHm_v2.0_Chr0c20g0500271 Rosa chinensis HOM05D004734 ORTHO05D006019 8.2e-12 75.5 69 58.0
PSO675G0915 Papaver somniferum HOM05D004734 ORTHO05D006019 1.2e-10 71.6 95 45.3
SEGI_13952 Sequoiadendron giganteum HOM05D004734 ORTHO05D006019 5.9e-10 69.3 207 29.0


User provided reference genes

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