Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.2201 Acer truncatum HOM05D001081 ORTHO05D007101 4.4e-68 261.2 131 100.0
Atru.chr9.478 Acer truncatum HOM05D001081 ORTHO05D007101 1.1e-63 246.5 131 93.9
Ciclev10022846m.g Citrus clementina HOM05D001081 ORTHO05D007101 3.5e-57 224.9 131 85.5
Duzib205G0894 Durio zibethinus HOM05D001081 ORTHO05D007101 5.1e-56 221.1 131 84.7
Cpa.g.sc3.88 Carica papaya HOM05D001081 ORTHO05D007101 6.6e-56 220.7 129 84.5
Gohir.A05G100100 Gossypium hirsutum HOM05D001081 ORTHO05D007101 8.6e-56 220.3 131 83.2
TAR625G0271 Trochodendron aralioides HOM05D001081 ORTHO05D007101 1.1e-55 219.9 131 83.2
RcHm_v2.0_Chr1g0380551 Rosa chinensis HOM05D001081 ORTHO05D007101 1.9e-55 219.2 128 82.8
Cfa016232 Carpinus fangiana HOM05D001081 ORTHO05D007101 2.5e-55 218.8 128 82.8
FvH4_7g31560 Fragaria vesca HOM05D001081 ORTHO05D007101 3.3e-55 218.4 128 83.6
FAN06G0656 Fragaria x ananassa HOM05D001081 ORTHO05D007101 3.3e-55 218.4 128 83.6
FAN10G3364 Fragaria x ananassa HOM05D001081 ORTHO05D007101 3.3e-55 218.4 128 83.6
FAN10G4231 Fragaria x ananassa HOM05D001081 ORTHO05D007101 3.3e-55 218.4 128 83.6
Gohir.D05G099900 Gossypium hirsutum HOM05D001081 ORTHO05D007101 3.3e-55 218.4 131 82.4
Gorai.009G103900 Gossypium raimondii HOM05D001081 ORTHO05D007101 3.3e-55 218.4 131 82.4
Phvul.003G125501 Phaseolus vulgaris HOM05D001081 ORTHO05D007101 4.3e-55 218.0 128 82.0
Duzib068G1165 Durio zibethinus HOM05D001081 ORTHO05D007101 5.6e-55 217.6 131 82.4
Thecc.03G199300 Theobroma cacao HOM05D001081 ORTHO05D007101 5.6e-55 217.6 131 83.2
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 7.3e-55 217.2 128 82.8
Nn6g34886 Nelumbo nucifera HOM05D001081 ORTHO05D007101 7.3e-55 217.2 125 83.2
Phvul.001G061700 Phaseolus vulgaris HOM05D001081 ORTHO05D007101 7.3e-55 217.2 128 82.0
VMungo0251G0734 Vigna mungo HOM05D001081 ORTHO05D007101 9.5e-55 216.9 128 82.0
CANSAT21G1508 Cannabis sativa HOM05D001081 ORTHO05D007101 1.2e-54 216.5 128 82.8
CiPaw.06G046200 Carya illinoinensis HOM05D001081 ORTHO05D007101 1.2e-54 216.5 128 83.6
Nn3g16671 Nelumbo nucifera HOM05D001081 ORTHO05D007101 1.2e-54 216.5 125 83.2
COL.COLO4_16767 Corchorus olitorius HOM05D001081 ORTHO05D007101 1.6e-54 216.1 130 81.5
Eucgr.F01156 Eucalyptus grandis HOM05D001081 ORTHO05D007101 1.6e-54 216.1 126 84.1
Glyma.05G143900 Glycine max HOM05D001081 ORTHO05D007101 1.6e-54 216.1 128 82.0
QL09p008866 Quercus lobata HOM05D001081 ORTHO05D007101 1.6e-54 216.1 128 82.0
QL09p009112 Quercus lobata HOM05D001081 ORTHO05D007101 1.6e-54 216.1 128 82.0
Ca_18157_v3 Cicer arietinum L. HOM05D001081 ORTHO05D007101 2.1e-54 215.7 128 82.0
FAN06G3917 Fragaria x ananassa HOM05D001081 ORTHO05D007101 2.1e-54 215.7 128 82.8
MD07G1288300 Malus domestica HOM05D001081 ORTHO05D007101 2.1e-54 215.7 129 80.6
Aqoxy3G01434 Aquilegia oxysepala HOM05D001081 ORTHO05D007101 4.7e-54 214.5 125 83.2
Aqoxy4G03008 Aquilegia oxysepala HOM05D001081 ORTHO05D007101 4.7e-54 214.5 125 81.6
Lj5g0017992 Lotus japonicus HOM05D001081 ORTHO05D007101 6.2e-54 214.2 130 82.3
PGR083G2221 Punica granatum HOM05D001081 ORTHO05D007101 6.2e-54 214.2 126 83.3
FAN01G2588 Fragaria x ananassa HOM05D001081 ORTHO05D007101 8.1e-54 213.8 128 82.0
Lj4g0009093 Lotus japonicus HOM05D001081 ORTHO05D007101 1.1e-53 213.4 130 80.8
Sed0012325 Sechium edule HOM05D001081 ORTHO05D007101 1.4e-53 213.0 131 79.4
Lj4P697T30 Lonicera japonica HOM05D001081 ORTHO05D007101 1.8e-53 212.6 130 77.7
Psat7g080240 Pisum sativum HOM05D001081 ORTHO05D007101 1.8e-53 212.6 128 80.5
Glyma.08G100200 Glycine max HOM05D001081 ORTHO05D007101 2.3e-53 212.2 128 79.7
HanXRQChr14g0429651 Helianthus annuus HOM05D001081 ORTHO05D007101 3.1e-53 211.8 130 77.7
TPR.G9557 Trifolium pratense HOM05D001081 ORTHO05D007101 3.1e-53 211.8 128 82.0
FAN03G0412 Fragaria x ananassa HOM05D001081 ORTHO05D007101 5.2e-53 211.1 128 81.2
GSVIVG01009969001 Vitis vinifera HOM05D001081 ORTHO05D007101 5.2e-53 211.1 123 82.9
Lalb_Chr13g0294051 Lupinus albus HOM05D001081 ORTHO05D007101 6.8e-53 210.7 128 78.1
unitig_32.g11232 Utricularia gibba HOM05D001081 ORTHO05D007101 6.8e-53 210.7 130 78.5
Prupe.2G309800 Prunus persica HOM05D001081 ORTHO05D007101 8.9e-53 210.3 128 80.5
Sed0024875 Sechium edule HOM05D001081 ORTHO05D007101 1.2e-52 209.9 131 80.9
TWI74G0183 Tripterygium wilfordii HOM05D001081 ORTHO05D007101 1.2e-52 209.9 131 78.6
THA.LOC104798899 Tarenaya hassleriana HOM05D001081 ORTHO05D007101 4.4e-52 208.0 130 76.9
Cc10_g01340 Coffea canephora HOM05D001081 ORTHO05D007101 7.6e-52 207.2 128 80.5
Sc13g0009920 Simmondsia chinensis HOM05D001081 ORTHO05D007101 9.9e-52 206.8 130 79.2
Ah.05g173160 Amaranthus hybridus HOM05D001081 ORTHO05D007101 1.7e-51 206.1 128 78.1
AUR62023429 Chenopodium quinoa HOM05D001081 ORTHO05D007101 1.7e-51 206.1 128 78.1
SGA_v2.0_scaffold19G08564 Striga asiatica HOM05D001081 ORTHO05D007101 1.7e-51 206.1 130 76.9
A01p13390 Brassica napus HOM05D001081 ORTHO05D007101 2.9e-51 205.3 129 78.3
BraA01t01281Z Brassica rapa HOM05D001081 ORTHO05D007101 2.9e-51 205.3 129 78.3
SGA_v2.0_scaffold25G11207 Striga asiatica HOM05D001081 ORTHO05D007101 2.9e-51 205.3 130 76.9
Carub.0007s1934 Capsella rubella HOM05D001081 ORTHO05D007101 3.7e-51 204.9 129 77.5
AUR62018052 Chenopodium quinoa HOM05D001081 ORTHO05D007101 3.7e-51 204.9 128 77.3
Thhalv10026223m.g Eutrema salsugineum HOM05D001081 ORTHO05D007101 3.7e-51 204.9 129 78.3
AL7G31700 Arabidopsis lyrata HOM05D001081 ORTHO05D007101 4.9e-51 204.5 129 78.3
MSTRG.22347 Avicennia marina HOM05D001081 ORTHO05D007101 4.9e-51 204.5 130 76.9
EL10Ac1g00785 Beta vulgaris HOM05D001081 ORTHO05D007101 6.4e-51 204.1 131 78.6
CDE05G3015 Ceratophyllum demersum HOM05D001081 ORTHO05D007101 6.4e-51 204.1 132 78.0
BcaC09g51172 Brassica carinata HOM05D001081 ORTHO05D007101 8.4e-51 203.8 129 78.3
BcaNung05107 Brassica carinata HOM05D001081 ORTHO05D007101 8.4e-51 203.8 129 78.3
BolC1t01570H Brassica oleracea HOM05D001081 ORTHO05D007101 8.4e-51 203.8 129 78.3
ECA238G0006 Erigeron canadensis HOM05D001081 ORTHO05D007101 8.4e-51 203.8 130 74.6
THA.LOC104823111 Tarenaya hassleriana HOM05D001081 ORTHO05D007101 8.4e-51 203.8 130 75.4
TAR381G1700 Trochodendron aralioides HOM05D001081 ORTHO05D007101 8.4e-51 203.8 125 80.0
CsaV3_3G019840 Cucumis sativus L. HOM05D001081 ORTHO05D007101 1.1e-50 203.4 119 82.4
Ah.03g146510 Amaranthus hybridus HOM05D001081 ORTHO05D007101 1.4e-50 203.0 128 77.3
C01p16100 Brassica napus HOM05D001081 ORTHO05D007101 1.4e-50 203.0 129 78.3
MELO3C008496.2 Cucumis melo HOM05D001081 ORTHO05D007101 1.4e-50 203.0 119 82.4
Medtr8g079498 Medicago truncatula HOM05D001081 ORTHO05D007101 1.4e-50 203.0 129 79.1
AT4G22000 Arabidopsis thaliana HOM05D001081 ORTHO05D007101 1.9e-50 202.6 129 77.5
SalBow6G0310 Salvia bowleyana HOM05D001081 ORTHO05D007101 1.9e-50 202.6 130 76.9
Sp7g20190 Schrenkiella parvula HOM05D001081 ORTHO05D007101 1.9e-50 202.6 129 77.5
Hund21005 Selenicereus undatus HOM05D001081 ORTHO05D007101 1.9e-50 202.6 128 76.6
Manes.18G126800 Manihot esculenta HOM05D001081 ORTHO05D007101 2.4e-50 202.2 126 78.6
PGSC0003DMG401028646 Solanum tuberosum HOM05D001081 ORTHO05D007101 4.1e-50 201.4 130 74.6
PGSC0003DMG402028646 Solanum tuberosum HOM05D001081 ORTHO05D007101 4.1e-50 201.4 130 74.6
Nitab4.5_0004146g0010 Nicotiana tabacum HOM05D001081 ORTHO05D007101 5.4e-50 201.1 127 76.4
Aa31LG6G3950 Aethionema arabicum HOM05D001081 ORTHO05D007101 9.2e-50 200.3 130 75.4
CAN.G411.51 Capsicum annuum HOM05D001081 ORTHO05D007101 1.6e-49 199.5 130 73.8
Nitab4.5_0004513g0030 Nicotiana tabacum HOM05D001081 ORTHO05D007101 2.1e-49 199.1 127 75.6
Lsat_1_v5_gn_2_7800 Lactuca sativa HOM05D000015 ORTHO05D002445 2.7e-49 198.7 131 74.8
Potri.012G015800 Populus trichocarpa HOM05D001081 ORTHO05D007101 4.6e-49 198.0 128 75.8
CARHR228810 Cardamine hirsuta HOM05D001081 ORTHO05D007101 7.8e-49 197.2 130 76.2
Migut.N03179 Erythranthe guttata HOM05D001081 ORTHO05D007101 7.8e-49 197.2 130 75.4
Potri.015G012700 Populus trichocarpa HOM05D001081 ORTHO05D007101 7.8e-49 197.2 128 75.8
MBI07_g23667_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D007101 1.0e-48 196.8 132 75.0
vmacro12512 Vaccinium macrocarpon HOM05D001081 ORTHO05D007101 1.0e-48 196.8 129 74.4
PSO541G4732 Papaver somniferum HOM05D001081 ORTHO05D007101 1.7e-48 196.1 128 75.0
PSO675G3624 Papaver somniferum HOM05D001081 ORTHO05D007101 1.7e-48 196.1 128 75.0
Sopen12g021840 Solanum pennellii HOM05D001081 ORTHO05D007101 1.7e-48 196.1 130 74.6
Peaxi162Scf00071g00017 Petunia axillaris HOM05D001081 ORTHO05D007101 2.3e-48 195.7 130 74.6
SHI02421 Sapria himalayana HOM05D006156 ORTHO05D007101 1.9e-47 192.6 128 71.9
Sopen12g021900 Solanum pennellii HOM05D001081 ORTHO05D007101 1.9e-47 192.6 130 73.1
DCAR_013886 Daucus carota HOM05D001081 ORTHO05D007101 1.2e-46 189.9 130 70.0
Os05g0114600 Oryza sativa ssp. japonica HOM05D001081 ORTHO05D007101 1.2e-46 189.9 128 73.4
vmacro07565 Vaccinium macrocarpon HOM05D001081 ORTHO05D007101 1.2e-46 189.9 129 71.3
Solyc12g042700.3 Solanum lycopersicum HOM05D001081 ORTHO05D007101 3.6e-46 188.3 130 72.3
MSTRG.25269 Avicennia marina HOM05D001081 ORTHO05D007101 6.8e-45 184.1 173 57.2
Zm00001eb355650 Zea mays HOM05D001081 ORTHO05D007101 1.2e-44 183.3 129 72.1
CDE11G0170 Ceratophyllum demersum HOM05D001081 ORTHO05D007101 1.3e-43 179.9 132 72.7
AUR62013725 Chenopodium quinoa HOM05D001081 ORTHO05D007101 2.9e-43 178.7 107 81.3
HPP92_008968 Vanilla planifolia HOM05D001081 ORTHO05D007101 1.4e-42 176.4 114 74.6
SEGI_15379 Sequoiadendron giganteum HOM05D001081 ORTHO05D007101 3.0e-40 168.7 132 69.7
ATR1134G096 Amborella trichopoda HOM05D001081 ORTHO05D007101 5.6e-39 164.5 113 72.6
ClCG05G008950 Citrullus lanatus HOM05D001081 ORTHO05D007101 1.4e-34 149.8 90 85.6
BcaB03g11721 Brassica carinata HOM05D001081 ORTHO05D007101 2.4e-34 149.1 105 74.3
Actinidia17007 Actinidia chinensis HOM05D001081 ORTHO05D007101 9.6e-31 137.1 83 73.5
CSS0017659 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D007101 9.0e-29 130.6 83 75.9
Gorai.006G039100 Gossypium raimondii HOM05D001081 ORTHO05D007101 4.2e-26 121.7 131 55.7
Mapoly0012s0096 Marchantia polymorpha HOM05D001081 ORTHO05D007101 1.0e-24 117.1 99 61.6
Dinv31879 Davidia involucrata HOM05D001081 ORTHO05D007101 1.3e-24 116.7 80 76.2
Solyc12g042720.3 Solanum lycopersicum HOM05D001081 ORTHO05D007101 4.3e-23 111.7 82 70.7
SMO356G0374 Selaginella moellendorffii HOM05D001081 ORTHO05D007101 1.6e-22 109.8 89 57.3
Pp3c15_6340 Physcomitrium patens HOM05D001081 ORTHO05D007101 2.4e-21 105.9 90 60.0
Gohir.A09G033580 Gossypium hirsutum HOM05D001081 ORTHO05D007101 3.1e-21 105.5 71 77.5
Gohir.D09G034100 Gossypium hirsutum HOM05D001081 ORTHO05D007101 3.4e-20 102.1 71 77.5
CSS0023065 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D007101 2.5e-18 95.9 62 77.4
Nitab4.5_0001077g0030 Nicotiana tabacum HOM05D012963 ORTHO05D007101 7.1e-18 94.4 83 53.0
CSS0034162 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D007101 1.0e-16 90.5 58 79.3
arahy.Tifrunner.gnm1.ann1.EUX55C Arachis hypogaea HOM05D001081 ORTHO05D007101 6.7e-16 87.8 51 88.2
CBR_g8977 Chara braunii HOM05D001081 ORTHO05D007101 7.4e-15 84.3 82 56.1
Zm00001eb266390 Zea mays HOM05D001081 ORTHO05D007101 3.4e-12 75.5 117 44.4
DCAR_016735 Daucus carota HOM05D001081 ORTHO05D007101 1.8e-08 63.2 59 44.1
Actinidia15449 Actinidia chinensis HOM05D001081 ORTHO05D007101 6.7e-08 61.2 36 72.2
A03p53190 Brassica napus HOM05D001081 ORTHO05D100949 1.6e-06 56.6 92 43.5


User provided reference genes

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