Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.2105 Acer truncatum HOM05D004481 ORTHO05D005350 4.2e-49 197.6 93 100.0
Atru.chr3.1909 Acer truncatum HOM05D004481 ORTHO05D005350 5.9e-43 177.2 93 92.5
Atru.chr13.2259 Acer truncatum HOM05D004481 ORTHO05D005350 3.9e-42 174.5 93 90.3
Atru.chr7.688 Acer truncatum HOM05D004481 ORTHO05D005350 3.9e-42 174.5 93 90.3
Atru.chr5.2445 Acer truncatum HOM05D004481 ORTHO05D005350 3.9e-26 121.3 92 66.3
QL11p032653 Quercus lobata HOM05D004481 ORTHO05D005350 7.1e-20 100.5 92 55.4
BcaNung04162 Brassica carinata HOM05D004481 ORTHO05D005350 2.1e-19 99.0 100 50.0
Potri.001G298500 Populus trichocarpa HOM05D004481 ORTHO05D005350 4.6e-19 97.8 92 53.3
AL7G17000 Arabidopsis lyrata HOM05D004481 ORTHO05D005350 1.3e-18 96.3 92 53.3
A01p04140 Brassica napus HOM05D004481 ORTHO05D005350 1.3e-18 96.3 92 53.3
Nn5g30459 Nelumbo nucifera HOM05D004481 ORTHO05D005350 2.3e-18 95.5 92 54.3
Sp7g32060 Schrenkiella parvula HOM05D004481 ORTHO05D005350 2.3e-18 95.5 92 52.2
Aa31LG2G16850 Aethionema arabicum HOM05D004481 ORTHO05D005350 3.0e-18 95.1 92 51.1
BcaNung04989 Brassica carinata HOM05D004481 ORTHO05D005350 3.0e-18 95.1 92 53.3
C01p04510 Brassica napus HOM05D004481 ORTHO05D005350 3.0e-18 95.1 92 53.3
Haze_10202 Corylus avellana HOM05D004481 ORTHO05D005350 3.0e-18 95.1 92 53.3
PGR142G4205 Punica granatum HOM05D004481 ORTHO05D005350 3.0e-18 95.1 93 50.5
THA.LOC104819549 Tarenaya hassleriana HOM05D004481 ORTHO05D005350 3.0e-18 95.1 92 52.2
GSVIVG01037896001 Vitis vinifera HOM05D004481 ORTHO05D005350 3.9e-18 94.7 92 55.4
AT4G34270 Arabidopsis thaliana HOM05D004481 ORTHO05D005350 5.1e-18 94.4 92 52.2
Carub.0007s0609 Capsella rubella HOM05D004481 ORTHO05D005350 5.1e-18 94.4 92 52.2
Cfa004607 Carpinus fangiana HOM05D004481 ORTHO05D005350 5.1e-18 94.4 92 53.3
PGSC0003DMG400025761 Solanum tuberosum HOM05D004481 ORTHO05D005350 5.1e-18 94.4 87 52.9
Actinidia00401 Actinidia chinensis HOM05D004481 ORTHO05D005350 6.6e-18 94.0 92 52.2
Ciclev10028970m.g Citrus clementina HOM05D004481 ORTHO05D005350 8.6e-18 93.6 92 54.3
BolC1t00437H Brassica oleracea HOM05D004481 ORTHO05D005350 1.9e-17 92.4 92 52.2
BraA01t00403Z Brassica rapa HOM05D004481 ORTHO05D005350 1.9e-17 92.4 103 47.6
CARHR242510 Cardamine hirsuta HOM05D004481 ORTHO05D005350 1.9e-17 92.4 92 52.2
Sabra09G0071800 Salix brachista HOM05D004481 ORTHO05D005350 2.5e-17 92.0 92 53.3
CiPaw.06G168400 Carya illinoinensis HOM05D004481 ORTHO05D005350 3.3e-17 91.7 92 51.1
THA.LOC104807234 Tarenaya hassleriana HOM05D004481 ORTHO05D005350 3.3e-17 91.7 92 51.1
Eucgr.I01088 Eucalyptus grandis HOM05D004481 ORTHO05D005350 4.3e-17 91.3 92 51.1
Thhalv10025895m.g Eutrema salsugineum HOM05D004481 ORTHO05D005350 4.3e-17 91.3 92 50.0
Potri.009G093200 Populus trichocarpa HOM05D004481 ORTHO05D005350 4.3e-17 91.3 92 52.2
Lsat_1_v5_gn_5_116421 Lactuca sativa HOM05D004481 ORTHO05D005350 7.3e-17 90.5 92 50.0
Nitab4.5_0003699g0050 Nicotiana tabacum HOM05D004481 ORTHO05D005350 7.3e-17 90.5 87 50.6
CANSAT25G3441 Cannabis sativa HOM05D004481 ORTHO05D005350 1.6e-16 89.4 92 51.1
CAN.G606.21 Capsicum annuum HOM05D004481 ORTHO05D005350 1.6e-16 89.4 87 51.7
Peaxi162Scf00016g02527 Petunia axillaris HOM05D004481 ORTHO05D005350 1.6e-16 89.4 87 50.6
TWI79G1728 Tripterygium wilfordii HOM05D004481 ORTHO05D005350 1.6e-16 89.4 92 51.1
HanXRQChr04g0105981 Helianthus annuus HOM05D004481 ORTHO05D005350 2.1e-16 89.0 94 50.0
ClCG02G006560 Citrullus lanatus HOM05D004481 ORTHO05D005350 2.8e-16 88.6 92 50.0
MD00G1108700 Malus domestica HOM05D004481 ORTHO05D005350 2.8e-16 88.6 92 50.0
Sed0018810 Sechium edule HOM05D004481 ORTHO05D005350 2.8e-16 88.6 92 48.9
Hma1.2p1_1023F.1_g248990 Hydrangea macrophylla HOM05D004481 ORTHO05D005350 3.6e-16 88.2 92 48.9
Nitab4.5_0001480g0100 Nicotiana tabacum HOM05D004481 ORTHO05D005350 3.6e-16 88.2 87 49.4
CsaV3_7G008050 Cucumis sativus L. HOM05D004481 ORTHO05D005350 4.7e-16 87.8 92 48.9
FvH4_2g04780 Fragaria vesca HOM05D004481 ORTHO05D005350 4.7e-16 87.8 92 48.9
FAN24G0473 Fragaria x ananassa HOM05D004481 ORTHO05D005350 4.7e-16 87.8 92 48.9
MD10G1100100 Malus domestica HOM05D004481 ORTHO05D005350 4.7e-16 87.8 92 48.9
Manes.07G066500 Manihot esculenta HOM05D004481 ORTHO05D005350 4.7e-16 87.8 93 51.6
Prupe.8G137600 Prunus persica HOM05D004481 ORTHO05D005350 4.7e-16 87.8 93 50.5
TAR376G0836 Trochodendron aralioides HOM05D004481 ORTHO05D005350 4.7e-16 87.8 92 50.0
vmacro01990 Vaccinium macrocarpon HOM05D004481 ORTHO05D005350 4.7e-16 87.8 92 48.9
Ah.01g010900 Amaranthus hybridus HOM05D004481 ORTHO05D005350 6.2e-16 87.4 92 50.0
CANSAT25G2190 Cannabis sativa HOM05D004481 ORTHO05D005350 6.2e-16 87.4 92 50.0
Rhsim11G0156300 Rhododendron simsii HOM05D004481 ORTHO05D005350 6.2e-16 87.4 92 47.8
EL10Ac9g22252 Beta vulgaris HOM05D004481 ORTHO05D005350 8.1e-16 87.0 92 47.8
AUR62010332 Chenopodium quinoa HOM05D004481 ORTHO05D005350 1.1e-15 86.7 92 47.8
MELO3C018500.2 Cucumis melo HOM05D004481 ORTHO05D005350 1.1e-15 86.7 92 50.0
Gohir.A12G021100 Gossypium hirsutum HOM05D004481 ORTHO05D005350 1.1e-15 86.7 90 51.1
FAN15G0583 Fragaria x ananassa HOM05D004481 ORTHO05D005350 1.8e-15 85.9 92 47.8
Oeu037260.1 Olea europaea HOM05D004481 ORTHO05D005350 1.8e-15 85.9 92 47.8
TAR628G0287 Trochodendron aralioides HOM05D004481 ORTHO05D005350 1.8e-15 85.9 92 46.7
FAN20G2321 Fragaria x ananassa HOM05D004481 ORTHO05D005350 2.4e-15 85.5 92 47.8
Gohir.D12G021400 Gossypium hirsutum HOM05D004481 ORTHO05D005350 2.4e-15 85.5 90 51.1
Gorai.008G021700 Gossypium raimondii HOM05D004481 ORTHO05D005350 2.4e-15 85.5 90 51.1
Nn1g04655 Nelumbo nucifera HOM05D004481 ORTHO05D005350 2.4e-15 85.5 92 45.7
RcHm_v2.0_Chr6g0254491 Rosa chinensis HOM05D004481 ORTHO05D005350 2.4e-15 85.5 92 47.8
Sopen01g049660 Solanum pennellii HOM05D004481 ORTHO05D005350 2.4e-15 85.5 83 54.2
Cc02_g19430 Coffea canephora HOM05D004481 ORTHO05D005350 3.1e-15 85.1 92 48.9
Thecc.02G111500 Theobroma cacao HOM05D004481 ORTHO05D005350 3.1e-15 85.1 92 48.9
Hund06305 Selenicereus undatus HOM05D004481 ORTHO05D005350 5.2e-15 84.3 93 48.4
Solyc10g049850.3 Solanum lycopersicum HOM05D004481 ORTHO05D005350 5.2e-15 84.3 85 50.6
PGSC0003DMG400023263 Solanum tuberosum HOM05D004481 ORTHO05D005350 5.2e-15 84.3 89 51.7
TWI75G0922 Tripterygium wilfordii HOM05D004481 ORTHO05D005350 5.2e-15 84.3 92 51.1
CSS0002878 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 6.8e-15 84.0 90 47.8
CSS0013759 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 6.8e-15 84.0 90 47.8
CSS0015264 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 6.8e-15 84.0 90 47.8
DCAR_021976 Daucus carota HOM05D004481 ORTHO05D005350 6.8e-15 84.0 92 50.0
Duzib052G1089 Durio zibethinus HOM05D004481 ORTHO05D005350 6.8e-15 84.0 92 50.0
Lj5g0012751 Lotus japonicus HOM05D004481 ORTHO05D005350 6.8e-15 84.0 93 49.5
Lalb_Chr02g0145211 Lupinus albus HOM05D004481 ORTHO05D005350 8.9e-15 83.6 93 46.2
Rhsim11G0157800 Rhododendron simsii HOM05D004481 ORTHO05D005350 8.9e-15 83.6 92 45.7
Cpa.g.sc106.118 Carica papaya HOM05D004481 ORTHO05D005350 1.2e-14 83.2 92 48.9
Nitab4.5_0002647g0020 Nicotiana tabacum HOM05D004481 ORTHO05D005350 1.5e-14 82.8 87 49.4
Sc18g0005550 Simmondsia chinensis HOM05D004481 ORTHO05D005350 2.0e-14 82.4 92 46.7
Actinidia27975 Actinidia chinensis HOM05D004481 ORTHO05D005350 3.4e-14 81.6 93 49.5
arahy.Tifrunner.gnm1.ann1.5RC8JY Arachis hypogaea HOM05D004481 ORTHO05D005350 3.4e-14 81.6 93 48.4
arahy.Tifrunner.gnm1.ann1.PGW4NS Arachis hypogaea HOM05D004481 ORTHO05D005350 3.4e-14 81.6 93 48.4
Lalb_Chr21g0308241 Lupinus albus HOM05D004481 ORTHO05D005350 3.4e-14 81.6 93 45.2
TPR.G27083 Trifolium pratense HOM05D004481 ORTHO05D005350 4.4e-14 81.3 93 47.3
Sed0023236 Sechium edule HOM05D004481 ORTHO05D005350 7.6e-14 80.5 92 44.6
MSTRG.20195 Avicennia marina HOM05D004481 ORTHO05D005350 1.7e-13 79.3 88 48.9
Psat6g216600 Pisum sativum HOM05D004481 ORTHO05D005350 1.7e-13 79.3 93 48.4
FAN27G3202 Fragaria x ananassa HOM05D004481 ORTHO05D005350 3.8e-13 78.2 86 46.5
Aqoxy5G01130 Aquilegia oxysepala HOM05D004481 ORTHO05D005350 4.9e-13 77.8 83 50.6
ECA234G2632 Erigeron canadensis HOM05D004481 ORTHO05D005350 4.9e-13 77.8 94 46.8
Glyma.20G130700 Glycine max HOM05D004481 ORTHO05D005350 4.9e-13 77.8 93 44.1
Glyma.10G260500 Glycine max HOM05D004481 ORTHO05D005350 8.4e-13 77.0 93 44.1
Medtr1g107045 Medicago truncatula HOM05D004481 ORTHO05D005350 8.4e-13 77.0 93 44.1
SGA_v2.0_scaffold225G42995 Striga asiatica HOM05D004481 ORTHO05D005350 8.4e-13 77.0 87 47.1
Migut.B00402 Erythranthe guttata HOM05D004481 ORTHO05D005350 1.1e-12 76.6 92 45.7
VMungo0720G1503 Vigna mungo HOM05D004481 ORTHO05D005350 1.4e-12 76.3 93 43.0
Ca_11058_v3 Cicer arietinum L. HOM05D004481 ORTHO05D005350 2.4e-12 75.5 93 45.2
Phvul.007G041700 Phaseolus vulgaris HOM05D004481 ORTHO05D005350 2.4e-12 75.5 93 43.0
SalBow6G4388 Salvia bowleyana HOM05D004481 ORTHO05D005350 2.4e-12 75.5 88 47.7
SalBow6G4779 Salvia bowleyana HOM05D004481 ORTHO05D005350 2.4e-12 75.5 88 47.7
HPP92_010143 Vanilla planifolia HOM05D004481 ORTHO05D005350 2.4e-12 75.5 86 50.0
PSO210G1902 Papaver somniferum HOM05D004481 ORTHO05D005350 4.2e-12 74.7 83 47.0
Lj5A215G63 Lonicera japonica HOM05D004481 ORTHO05D005350 9.3e-12 73.6 118 40.7
PSO170G4403 Papaver somniferum HOM05D004481 ORTHO05D005350 3.5e-11 71.6 83 47.0
CDE02G3699 Ceratophyllum demersum HOM05D004481 ORTHO05D005350 1.7e-10 69.3 84 45.2
unitig_0.g879 Utricularia gibba HOM05D004481 ORTHO05D005350 1.9e-09 65.9 93 40.9
AUR62039053 Chenopodium quinoa HOM05D004481 ORTHO05D005350 2.5e-09 65.5 92 39.1
BolC3t17849H Brassica oleracea HOM05D004481 ORTHO05D005350 3.3e-09 65.1 42 71.4
CSS0003948 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 3.3e-09 65.1 69 49.3
SEGI_10030 Sequoiadendron giganteum HOM05D004481 ORTHO05D005350 3.3e-09 65.1 83 44.6
Dinv42206 Davidia involucrata HOM05D002228 ORTHO05D005350 9.6e-09 63.5 41 70.7
SHI05271 Sapria himalayana HOM05D004481 ORTHO05D005350 9.6e-09 63.5 88 40.9
Zm00001eb214380 Zea mays HOM05D004481 ORTHO05D005350 9.6e-09 63.5 82 41.5
Hma1.2p1_1023F.1_g249000 Hydrangea macrophylla HOM05D004481 ORTHO05D005350 4.8e-08 61.2 41 68.3
Cfa005651 Carpinus fangiana HOM05D004481 ORTHO05D005350 1.4e-07 59.7 64 46.9
Hund00159 Selenicereus undatus HOM05D004481 ORTHO05D005350 1.8e-07 59.3 88 36.4
Pp3c10_18670 Physcomitrium patens HOM05D004481 ORTHO05D005350 2.4e-07 58.9 86 39.5
BcaC01g03137 Brassica carinata HOM05D004481 ORTHO05D005350 4.0e-07 58.2 42 64.3
C03p55700 Brassica napus HOM05D004481 ORTHO05D005350 4.0e-07 58.2 42 64.3
Mapoly0064s0080 Marchantia polymorpha HOM05D004481 ORTHO05D005350 4.0e-07 58.2 42 61.9
Os03g0760600 Oryza sativa ssp. japonica HOM05D004481 ORTHO05D005350 6.9e-07 57.4 84 39.3
AagrBONN_evm.TU.Sc2ySwM_228.2403 Anthoceros agrestis HOM05D004481 ORTHO05D005350 2.0e-06 55.8 69 43.5
Cfa017289 Carpinus fangiana HOM05D004481 ORTHO05D005350 3.4e-06 55.1 56 50.0


User provided reference genes

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