Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.2015 Acer truncatum HOM05D000014 ORTHO05D000016 1.1e-44 183.0 92 100.0
arahy.Tifrunner.gnm1.ann1.V9GJFQ Arachis hypogaea HOM05D000014 ORTHO05D000016 4.0e-07 58.2 90 34.4
RcHm_v2.0_Chr2g0135321 Rosa chinensis HOM05D000014 ORTHO05D000016 5.2e-07 57.8 85 38.8
arahy.Tifrunner.gnm1.ann1.41XP9B Arachis hypogaea HOM05D000014 ORTHO05D000093 6.8e-07 57.4 79 38.0
SGA_v2.0_scaffold55G19891 Striga asiatica HOM05D000014 ORTHO05D000093 6.8e-07 57.4 84 41.7
FvH4_6g21790 Fragaria vesca HOM05D000014 ORTHO05D015124 8.9e-07 57.0 85 36.5
SGA_v2.0_scaffold107G30783 Striga asiatica HOM05D000014 ORTHO05D000016 8.9e-07 57.0 84 41.7
SGA_v2.0_scaffold63G21782 Striga asiatica HOM05D000014 ORTHO05D000016 8.9e-07 57.0 84 38.1
TWI59G0123 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 8.9e-07 57.0 78 37.2
FvH4_4g14569 Fragaria vesca HOM05D000014 ORTHO05D000093 1.2e-06 56.6 78 37.2
Medtr0150s0040 Medicago truncatula HOM05D000014 ORTHO05D000016 1.2e-06 56.6 89 34.8
SGA_v2.0_scaffold368G50086 Striga asiatica HOM05D000014 ORTHO05D000093 1.2e-06 56.6 80 42.5
SGA_v2.0_scaffold30G12415 Striga asiatica HOM05D000014 ORTHO05D000016 1.5e-06 56.2 89 33.7
SGA_v2.0_scaffold336G49156 Striga asiatica HOM05D000014 ORTHO05D000093 1.5e-06 56.2 84 41.7
FvH4_3g01281 Fragaria vesca HOM05D000014 ORTHO05D000016 2.0e-06 55.8 80 36.2
SGA_v2.0_scaffold129G34168 Striga asiatica HOM05D000014 ORTHO05D000093 2.0e-06 55.8 84 39.3
SGA_v2.0_scaffold41G15734 Striga asiatica HOM05D000014 ORTHO05D000093 2.0e-06 55.8 84 40.5
THA.LOC104801904 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 2.0e-06 55.8 86 38.4
THA.LOC104801906 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 2.0e-06 55.8 86 38.4
THA.LOC104803157 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 2.0e-06 55.8 86 38.4
THA.LOC109116024 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 2.0e-06 55.8 86 38.4
THA.LOC109116178 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 2.0e-06 55.8 86 38.4
SGA_v2.0_scaffold742G53548 Striga asiatica HOM05D000014 ORTHO05D000093 2.6e-06 55.5 84 39.3
TWI31G0333 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 2.6e-06 55.5 82 32.9
arahy.Tifrunner.gnm1.ann1.54GGN4 Arachis hypogaea HOM05D000014 ORTHO05D000093 3.4e-06 55.1 90 33.3
arahy.Tifrunner.gnm1.ann1.PGMA1J Arachis hypogaea HOM05D000014 ORTHO05D000016 3.4e-06 55.1 82 40.2
FvH4_3g26051 Fragaria vesca HOM05D000014 ORTHO05D000093 3.4e-06 55.1 78 35.9
SGA_v2.0_scaffold16G07603 Striga asiatica HOM05D000014 ORTHO05D000016 3.4e-06 55.1 80 38.8
SGA_v2.0_scaffold174G39228 Striga asiatica HOM05D000014 ORTHO05D000016 3.4e-06 55.1 84 41.7
arahy.Tifrunner.gnm1.ann1.N4GHFH Arachis hypogaea HOM05D000014 ORTHO05D000093 4.4e-06 54.7 83 33.7
BolC7t43453H Brassica oleracea HOM05D000014 ORTHO05D000016 4.4e-06 54.7 86 36.0
FvH4_7g12351 Fragaria vesca HOM05D000014 ORTHO05D000016 4.4e-06 54.7 80 35.0
PSO386G0146 Papaver somniferum HOM05D000014 ORTHO05D000016 4.4e-06 54.7 80 36.2
SGA_v2.0_scaffold53G19372 Striga asiatica HOM05D000014 ORTHO05D000093 4.4e-06 54.7 80 41.2
THA.LOC104820201 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 5.7e-06 54.3 86 36.0
arahy.Tifrunner.gnm1.ann1.7D3YFX Arachis hypogaea HOM05D000014 ORTHO05D000016 7.5e-06 53.9 79 38.0
THA.LOC104808347 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 7.5e-06 53.9 86 34.9
THA.LOC104810563 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 7.5e-06 53.9 86 36.0
TWI39G0697 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 7.5e-06 53.9 84 32.1
TWI81G0801 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 7.5e-06 53.9 84 32.1
CANSAT80G2384 Cannabis sativa HOM05D000014 ORTHO05D000016 9.8e-06 53.5 82 36.6
PSO170G0799 Papaver somniferum HOM05D000014 ORTHO05D000016 9.8e-06 53.5 94 31.9


User provided reference genes

Program Settings