Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.1999 Acer truncatum HOM05D007911 ORTHO05D009536 0.0e+00 1198.7 681 100.0
Duzib093G1996 Durio zibethinus HOM05D007911 ORTHO05D009536 4.3e-82 310.1 731 36.8
Thecc.05G151800 Theobroma cacao HOM05D007911 ORTHO05D009536 8.1e-81 305.8 721 36.3
COL.COLO4_33204 Corchorus olitorius HOM05D007911 ORTHO05D009536 6.0e-68 263.1 764 34.4
Gohir.D01G119650 Gossypium hirsutum HOM05D007911 ORTHO05D009536 4.3e-66 256.9 720 33.3
Gohir.A01G130811 Gossypium hirsutum HOM05D007911 ORTHO05D009536 2.1e-65 254.6 720 33.2
Gorai.002G146100 Gossypium raimondii HOM05D007911 ORTHO05D009536 4.8e-65 253.4 722 33.2
Atru.chr1.1239 Acer truncatum HOM05D007911 ORTHO05D009536 2.1e-60 238.0 143 79.0
Potri.016G043300 Populus trichocarpa HOM05D007911 ORTHO05D009536 1.0e-59 235.7 702 32.8
Cfa016782 Carpinus fangiana HOM05D007911 ORTHO05D009536 6.7e-59 233.0 788 29.6
Manes.08G052400 Manihot esculenta HOM05D007911 ORTHO05D009536 3.7e-57 227.3 684 34.1
CiPaw.09G040100 Carya illinoinensis HOM05D007911 ORTHO05D009536 6.3e-57 226.5 694 33.6
QL07p003623 Quercus lobata HOM05D007911 ORTHO05D009536 5.9e-47 193.4 427 35.6
Potri.006G046700 Populus trichocarpa HOM05D007911 ORTHO05D009536 1.7e-46 191.8 689 30.0
Atru.chr1.1237 Acer truncatum HOM05D007911 ORTHO05D009536 8.5e-46 189.5 258 51.2
Ciclev10006879m.g Citrus clementina HOM05D007911 ORTHO05D009536 2.7e-44 184.5 145 60.7
Prupe.7G054000 Prunus persica HOM05D007911 ORTHO05D009536 4.6e-44 183.7 240 50.4
Cpa.g.sc1210.2 Carica papaya HOM05D007911 ORTHO05D009536 1.0e-43 182.6 707 28.7
TWI53G0905 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 1.8e-43 181.8 348 39.1
Sabra06G0032200 Salix brachista HOM05D007911 ORTHO05D009536 4.8e-41 173.7 693 29.0
Atru.chr1.1238 Acer truncatum HOM05D007911 ORTHO05D009536 1.4e-40 172.2 218 53.2
Haze_19798 Corylus avellana HOM05D007911 ORTHO05D009536 5.3e-40 170.2 926 26.2
Duzib106G0073 Durio zibethinus HOM05D007911 ORTHO05D009536 2.7e-36 157.9 144 56.9
CANSAT80G2434 Cannabis sativa HOM05D007911 ORTHO05D009536 2.8e-33 147.9 209 43.5
CANSAT80G1261 Cannabis sativa HOM05D007911 ORTHO05D009536 4.1e-32 144.1 209 44.0
Lalb_Chr01g0017411 Lupinus albus HOM05D007911 ORTHO05D009536 2.6e-31 141.4 193 45.1
Lalb_Chr25g0287291 Lupinus albus HOM05D007911 ORTHO05D009536 1.7e-30 138.7 204 43.6
Ca_08429_v3 Cicer arietinum L. HOM05D007911 ORTHO05D009536 6.5e-30 136.7 213 41.8
arahy.Tifrunner.gnm1.ann1.BL1IZ1 Arachis hypogaea HOM05D007911 ORTHO05D009536 8.5e-30 136.3 169 48.5
Actinidia39204 Actinidia chinensis HOM05D007911 ORTHO05D009536 1.5e-29 135.6 341 33.7
arahy.Tifrunner.gnm1.ann1.18RKPD Arachis hypogaea HOM05D007911 ORTHO05D009536 1.9e-29 135.2 169 48.5
Actinidia09304 Actinidia chinensis HOM05D007911 ORTHO05D009536 2.5e-29 134.8 336 34.8
TPR.G18258 Trifolium pratense HOM05D007911 ORTHO05D009536 2.5e-29 134.8 244 38.1
TWI77G0280 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 5.5e-29 133.7 274 37.6
RcHm_v2.0_Chr3g0483481 Rosa chinensis HOM05D020102 ORTHO05D009536 7.2e-29 133.3 729 27.6
Hma1.2p1_0005F.1_g004500 Hydrangea macrophylla HOM05D007911 ORTHO05D009536 2.7e-28 131.3 198 42.4
Eucgr.A02312 Eucalyptus grandis HOM05D007911 ORTHO05D009536 3.0e-27 127.9 214 37.4
FAN09G4584 Fragaria x ananassa HOM05D020102 ORTHO05D009536 5.2e-27 127.1 110 52.7
Psat3g074440 Pisum sativum HOM05D007911 ORTHO05D009536 6.7e-27 126.7 113 57.5
Lj1g0009156 Lotus japonicus HOM05D007911 ORTHO05D009536 2.0e-26 125.2 237 39.2
arahy.Tifrunner.gnm1.ann1.XA9LH2 Arachis hypogaea HOM05D007911 ORTHO05D009536 3.7e-25 120.9 144 48.6
Phvul.001G129400 Phaseolus vulgaris HOM05D007911 ORTHO05D009536 3.7e-25 120.9 131 50.4
PGR004G0024 Punica granatum HOM05D007911 ORTHO05D009536 3.7e-25 120.9 133 49.6
MELO3C026340.2 Cucumis melo HOM05D007911 ORTHO05D009536 6.3e-25 120.2 298 32.6
FvH4_6g24470 Fragaria vesca HOM05D020102 ORTHO05D009536 1.1e-24 119.4 110 50.9
Medtr7g091040 Medicago truncatula HOM05D007911 ORTHO05D009536 1.1e-24 119.4 113 54.0
Rhsim03G0028700 Rhododendron simsii HOM05D007911 ORTHO05D009536 1.1e-24 119.4 335 32.2
TAR636G2018 Trochodendron aralioides HOM05D007911 ORTHO05D009536 3.1e-24 117.9 201 38.8
CSS0030068 Camellia sinensis var. sinensis HOM05D007911 ORTHO05D009536 4.1e-24 117.5 421 29.5
ClCG04G003660 Citrullus lanatus HOM05D007911 ORTHO05D009536 7.0e-24 116.7 273 32.6
Nn2g15134 Nelumbo nucifera HOM05D007911 ORTHO05D009536 7.0e-24 116.7 213 35.7
FAN14G4000 Fragaria x ananassa HOM05D020102 ORTHO05D009536 9.1e-24 116.3 200 36.0
VMungo1383G2470 Vigna mungo HOM05D007911 ORTHO05D009536 3.5e-23 114.4 115 53.9
VMungo0720G0307 Vigna mungo HOM05D007911 ORTHO05D009536 1.3e-22 112.5 107 54.2
Oeu035501.1 Olea europaea HOM05D007911 ORTHO05D009536 1.7e-22 112.1 166 40.4
EL10Ac3g07134 Beta vulgaris HOM05D021336 ORTHO05D009536 6.5e-22 110.2 154 40.3
Glyma.03G133900 Glycine max HOM05D007911 ORTHO05D009536 7.2e-21 106.7 428 29.9
vmacro21970 Vaccinium macrocarpon HOM05D007911 ORTHO05D009536 1.6e-20 105.5 309 32.7
Glyma.19G136200 Glycine max HOM05D007911 ORTHO05D009536 4.7e-20 104.0 101 54.5
PSO339G2888 Papaver somniferum HOM05D007911 ORTHO05D009536 4.7e-20 104.0 146 40.4
Sed0016742 Sechium edule HOM05D007911 ORTHO05D009536 5.2e-19 100.5 179 37.4
Medtr2g012890 Medicago truncatula HOM05D007911 ORTHO05D009536 3.4e-18 97.8 273 33.3
Nitab4.5_0001618g0290 Nicotiana tabacum HOM05D017238 ORTHO05D009536 9.8e-18 96.3 133 42.9
Ciclev10004930m.g Citrus clementina HOM05D007911 ORTHO05D044634 1.7e-17 95.5 336 40.8
PSO384G4398 Papaver somniferum HOM05D007911 ORTHO05D009536 2.8e-17 94.7 146 39.7
Duzib106G0470 Durio zibethinus HOM05D007911 ORTHO05D009536 6.3e-17 93.6 300 32.7
Hund24682 Selenicereus undatus HOM05D007911 ORTHO05D009536 6.3e-17 93.6 133 38.3
SGA_v2.0_scaffold69G23124 Striga asiatica HOM05D007911 ORTHO05D009536 6.3e-17 93.6 127 40.2
Cc06_g17980 Coffea canephora HOM05D007911 ORTHO05D009536 1.1e-16 92.8 96 44.8
Nitab4.5_0000826g0230 Nicotiana tabacum HOM05D017238 ORTHO05D009536 1.1e-16 92.8 205 34.6
FAN05G5247 Fragaria x ananassa HOM05D020102 ORTHO05D009536 1.4e-16 92.4 249 32.9
Peaxi162Scf00130g00827 Petunia axillaris HOM05D017238 ORTHO05D009536 1.8e-16 92.0 120 42.5
AUR62026093 Chenopodium quinoa HOM05D021336 ORTHO05D009536 7.0e-16 90.1 445 25.4
SGA_v2.0_scaffold105G30375 Striga asiatica HOM05D007911 ORTHO05D009536 2.0e-15 88.6 204 33.3
MSTRG.6410 Avicennia marina HOM05D007911 ORTHO05D009536 4.5e-15 87.4 347 28.2
Solyc04g016290.3 Solanum lycopersicum HOM05D017238 ORTHO05D009536 4.5e-15 87.4 120 41.7
Hund19135 Selenicereus undatus HOM05D021336 ORTHO05D009536 7.7e-15 86.7 123 37.4
CAN.G676.9 Capsicum annuum HOM05D017238 ORTHO05D009536 1.3e-14 85.9 135 43.7
Sopen04g008390 Solanum pennellii HOM05D017238 ORTHO05D009536 1.3e-14 85.9 120 42.5
Haze_19794 Corylus avellana HOM05D007911 ORTHO05D009536 1.9e-13 82.0 430 27.4
SalBow6G1456 Salvia bowleyana HOM05D007911 ORTHO05D009536 1.9e-13 82.0 344 25.9
Aqoxy1G00297 Aquilegia oxysepala HOM05D007911 ORTHO05D009536 3.2e-13 81.3 311 28.6
Sc13g0001600 Simmondsia chinensis HOM05D007911 ORTHO05D009536 3.2e-13 81.3 300 28.0
CsaV3_4G027600 Cucumis sativus L. HOM05D007911 ORTHO05D009536 3.6e-12 77.8 179 30.2
SalBow6G0990 Salvia bowleyana HOM05D007911 ORTHO05D009536 4.7e-12 77.4 344 25.6
HanXRQChr08g0234551 Helianthus annuus HOM05D007911 ORTHO05D009536 6.8e-11 73.6 258 27.9
ECA247G2582 Erigeron canadensis HOM05D007911 ORTHO05D009536 1.2e-10 72.8 162 36.4
Ciclev10005612m.g Citrus clementina HOM05D007911 ORTHO05D044634 2.6e-10 71.6 110 51.8
AUR62024506 Chenopodium quinoa HOM05D021336 ORTHO05D009536 7.5e-10 70.1 340 24.7
Lsat_1_v5_gn_9_31060 Lactuca sativa HOM05D007911 ORTHO05D009536 7.5e-10 70.1 255 29.8
Ah.04g151450 Amaranthus hybridus HOM05D021336 ORTHO05D009536 2.2e-09 68.6 114 35.1
Nitab4.5_0000677g0260 Nicotiana tabacum HOM05D029882 ORTHO05D009536 2.4e-08 65.1 90 44.4
QL07p005404 Quercus lobata HOM05D007911 ORTHO05D009536 2.9e-06 58.2 247 30.0


User provided reference genes

Program Settings