Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2543.8 1270 100.0
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2306.2 1267 90.2
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2295.0 1268 89.4
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2295.0 1268 89.5
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2287.3 1268 88.7
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2285.4 1268 89.3
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2284.2 1271 88.7
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2277.7 1267 88.2
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2276.1 1267 88.2
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2273.8 1262 89.0
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2273.4 1262 89.1
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2268.8 1267 88.0
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2268.0 1267 88.2
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2266.1 1267 88.2
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2264.2 1267 88.1
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2263.8 1267 87.8
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2262.3 1267 88.0
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2260.3 1267 88.0
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2259.6 1270 88.3
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2258.4 1268 87.9
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2254.2 1267 87.5
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2252.2 1267 87.0
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2250.3 1270 87.8
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2248.8 1268 86.9
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2246.5 1270 87.7
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2244.5 1268 86.9
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2243.0 1267 86.7
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2242.2 1270 87.3
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2236.1 1262 87.9
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2232.2 1263 87.2
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2231.1 1267 87.1
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2228.0 1268 85.8
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2226.1 1267 86.1
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2220.7 1267 86.2
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2219.5 1271 85.4
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2216.8 1267 85.2
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2213.7 1268 85.9
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2213.7 1267 85.1
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2213.3 1267 85.1
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2211.0 1267 85.6
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2208.3 1267 86.3
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2207.9 1270 86.5
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2204.9 1270 85.0
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2199.9 1267 85.2
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2199.5 1267 84.8
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2198.7 1267 85.6
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2198.7 1267 86.4
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2198.3 1267 85.3
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2197.2 1267 84.8
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2196.8 1267 84.8
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2196.8 1267 84.9
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2196.4 1267 85.0
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2196.0 1267 85.3
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2195.6 1267 85.4
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2194.9 1267 84.6
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2194.1 1269 85.0
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2191.8 1270 85.0
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2191.4 1239 87.4
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2191.0 1267 84.6
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2189.1 1266 84.8
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2188.3 1269 85.2
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2188.3 1267 84.8
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2188.3 1270 84.3
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2187.5 1267 84.5
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2187.1 1269 84.2
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2186.4 1266 84.6
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2183.3 1269 84.7
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2181.0 1267 85.1
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2181.0 1271 84.3
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2180.6 1269 84.9
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2176.7 1273 84.5
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2174.1 1272 83.7
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2169.4 1267 84.1
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2167.5 1208 88.6
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2166.7 1267 84.1
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2166.3 1268 84.5
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2165.2 1270 83.5
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2162.9 1267 84.1
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2157.1 1271 83.2
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2154.4 1268 83.9
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2154.4 1266 83.2
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2154.0 1263 84.2
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2152.1 1249 84.3
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2135.9 1269 83.1
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2125.5 1276 83.9
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2122.4 1271 82.3
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2106.3 1267 81.5
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2098.2 1272 80.7
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2090.5 1269 80.5
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 2082.0 1267 81.1
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2078.1 1269 81.4
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2059.3 1265 80.4
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2018.0 1268 79.2
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1985.7 1161 85.0
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1975.7 1268 77.4
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1965.7 1276 75.3
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1917.5 1272 75.3
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1874.4 1278 72.2
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1870.5 1192 78.5
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1869.7 1069 84.8
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1855.1 1089 83.7
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1850.5 1248 73.9
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1831.2 1268 73.5
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1827.8 1271 71.7
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1808.5 1268 73.5
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1806.6 1130 80.6
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1669.4 963 83.4
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1561.2 1048 74.0
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1535.8 1322 60.7
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1417.5 813 85.1
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1404.8 1270 61.5
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1313.9 1330 53.8
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1302.3 1391 52.7
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1298.1 725 88.0
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1176.4 1018 62.5
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1150.6 811 73.2
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 2.0e-274 949.9 570 83.2
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.9e-262 909.1 502 88.8
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 4.9e-257 892.1 1247 40.9
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 3.6e-223 779.6 527 75.3
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 6.1e-223 778.9 650 61.2
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.5e-205 721.1 455 81.1
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 4.6e-186 656.4 389 84.6
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 1.3e-129 468.8 359 67.1
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 1.1e-126 459.1 313 77.0
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 3.7e-111 407.5 270 77.0
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 2.1e-82 312.0 480 42.7
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 7.0e-70 270.4 170 78.2
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 2.3e-68 265.4 170 77.6
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.9e-67 262.3 170 76.5
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.3e-63 249.6 138 90.6
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 4.6e-61 241.1 234 56.4
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 1.3e-52 213.0 117 86.3
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.2e-40 173.3 91 89.0
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.5e-40 172.9 155 63.2
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 6.4e-39 167.5 182 54.9
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 1.4e-33 149.8 100 69.0
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.4e-25 123.2 104 61.5


User provided reference genes

Program Settings