Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.1656 Acer truncatum HOM05D005923 ORTHO05D007376 4.7e-67 257.7 127 100.0
Atru.chr12.1669 Acer truncatum HOM05D005923 ORTHO05D007376 7.3e-60 233.8 127 93.7
COL.COLO4_36605 Corchorus olitorius HOM05D005923 ORTHO05D007376 1.7e-40 169.5 125 68.0
RcHm_v2.0_Chr3g0447491 Rosa chinensis HOM05D005923 ORTHO05D007376 2.1e-38 162.5 125 64.0
FvH4_6g00140 Fragaria vesca HOM05D005923 ORTHO05D007376 7.9e-38 160.6 125 63.2
Potri.008G077000 Populus trichocarpa HOM05D005923 ORTHO05D007376 7.9e-38 160.6 124 67.7
Ciclev10011172m.g Citrus clementina HOM05D005923 ORTHO05D007376 1.8e-37 159.5 125 65.6
MD12G1262500 Malus domestica HOM05D005923 ORTHO05D007376 5.1e-37 157.9 123 62.6
TAR365G1048 Trochodendron aralioides HOM05D005923 ORTHO05D007376 5.1e-37 157.9 123 63.4
Duzib128G1624 Durio zibethinus HOM05D005923 ORTHO05D007376 8.7e-37 157.1 125 62.4
Gohir.A02G106500 Gossypium hirsutum HOM05D005923 ORTHO05D007376 8.7e-37 157.1 125 62.4
Gohir.D03G071400 Gossypium hirsutum HOM05D005923 ORTHO05D007376 8.7e-37 157.1 125 62.4
Gorai.003G088600 Gossypium raimondii HOM05D005923 ORTHO05D007376 8.7e-37 157.1 125 62.4
Sabra08G0057400 Salix brachista HOM05D005923 ORTHO05D007376 1.1e-36 156.8 125 66.4
TWI18G0568 Tripterygium wilfordii HOM05D005923 ORTHO05D007376 3.3e-36 155.2 125 61.6
QL10p015972 Quercus lobata HOM05D005923 ORTHO05D007376 1.3e-35 153.3 123 62.6
Cfa006234 Carpinus fangiana HOM05D005923 ORTHO05D007376 3.7e-35 151.8 123 61.8
Eucgr.B01459 Eucalyptus grandis HOM05D005923 ORTHO05D007376 6.2e-35 151.0 123 61.0
Potri.010G180800 Populus trichocarpa HOM05D005923 ORTHO05D007376 8.1e-35 150.6 124 62.1
Haze_04596 Corylus avellana HOM05D005923 ORTHO05D007376 2.4e-34 149.1 123 62.6
Manes.12G002100 Manihot esculenta HOM05D005923 ORTHO05D007376 3.1e-34 148.7 125 63.2
PGR031G2609 Punica granatum HOM05D005923 ORTHO05D007376 4.0e-34 148.3 125 60.8
CSS0002064 Camellia sinensis var. sinensis HOM05D005923 ORTHO05D007376 2.0e-33 146.0 125 59.2
Nn013s41460 Nelumbo nucifera HOM05D005923 ORTHO05D007376 7.6e-33 144.1 123 59.3
CiPaw.07G083600 Carya illinoinensis HOM05D005923 ORTHO05D007376 1.3e-32 143.3 123 61.0
CsaV3_2G010290 Cucumis sativus L. HOM05D005923 ORTHO05D007376 3.8e-32 141.7 123 56.1
PSO675G7036 Papaver somniferum HOM05D005923 ORTHO05D007376 4.9e-32 141.4 123 56.9
PGSC0003DMG400016251 Solanum tuberosum HOM05D005923 ORTHO05D007376 6.4e-32 141.0 125 57.6
Solyc11g008570.2 Solanum lycopersicum HOM05D005923 ORTHO05D007376 1.1e-31 140.2 125 57.6
EL10Ac4g10017 Beta vulgaris HOM05D005923 ORTHO05D007376 1.4e-31 139.8 125 52.8
Sopen11g004360 Solanum pennellii HOM05D005923 ORTHO05D007376 2.4e-31 139.0 125 56.8
Sc16g0010600 Simmondsia chinensis HOM05D005923 ORTHO05D007376 5.5e-31 137.9 124 56.5
Actinidia06787 Actinidia chinensis HOM05D005923 ORTHO05D007376 1.2e-30 136.7 126 57.1
CAN.G321.22 Capsicum annuum HOM05D005923 ORTHO05D007376 1.2e-30 136.7 125 55.2
Nitab4.5_0001003g0070 Nicotiana tabacum HOM05D005923 ORTHO05D007376 1.6e-30 136.3 125 54.4
Nitab4.5_0009631g0020 Nicotiana tabacum HOM05D005923 ORTHO05D007376 2.1e-30 136.0 125 55.2
PSO732G0688 Papaver somniferum HOM05D005923 ORTHO05D007376 2.1e-30 136.0 123 53.7
ECA232G3428 Erigeron canadensis HOM05D005923 ORTHO05D007376 2.7e-30 135.6 125 58.4
Medtr7g080490 Medicago truncatula HOM05D005923 ORTHO05D007376 4.6e-30 134.8 123 56.1
GSVIVG01003759001 Vitis vinifera HOM05D005923 ORTHO05D007376 6.0e-30 134.4 123 57.7
Phvul.008G051900 Phaseolus vulgaris HOM05D005923 ORTHO05D007376 7.9e-30 134.0 123 55.3
Rhsim05G0165000 Rhododendron simsii HOM05D005923 ORTHO05D007376 7.9e-30 134.0 125 56.0
Actinidia03247 Actinidia chinensis HOM05D005923 ORTHO05D007376 1.0e-29 133.7 121 58.7
ClCG11G012400 Citrullus lanatus HOM05D005923 ORTHO05D007376 1.0e-29 133.7 123 52.8
Lalb_Chr03g0038141 Lupinus albus HOM05D005923 ORTHO05D007376 1.8e-29 132.9 123 56.1
Oeu034703.2 Olea europaea HOM05D005923 ORTHO05D007376 5.1e-29 131.3 126 54.0
Peaxi162Scf00296g01112 Petunia axillaris HOM05D005923 ORTHO05D007376 8.7e-29 130.6 125 52.8
AUR62014468 Chenopodium quinoa HOM05D005923 ORTHO05D007376 1.1e-28 130.2 125 51.2
DCAR_031594 Daucus carota HOM05D005923 ORTHO05D007376 3.3e-28 128.6 125 54.4
CANSAT21G0310 Cannabis sativa HOM05D005923 ORTHO05D007376 1.3e-27 126.7 123 48.8
AUR62034530 Chenopodium quinoa HOM05D005923 ORTHO05D007376 1.6e-27 126.3 125 50.4
Glyma.18G244700 Glycine max HOM05D005923 ORTHO05D007376 1.6e-27 126.3 123 55.3
VMungo1383G0851 Vigna mungo HOM05D005923 ORTHO05D007376 2.1e-27 125.9 123 53.7
HanXRQChr10g0283011 Helianthus annuus HOM05D005923 ORTHO05D007376 2.8e-27 125.6 119 57.1
TPR.G31231 Trifolium pratense HOM05D005923 ORTHO05D007376 4.8e-27 124.8 123 52.0
Lj1g0007040 Lotus japonicus HOM05D005923 ORTHO05D007376 6.2e-27 124.4 123 55.3
Sabra10G0138600 Salix brachista HOM05D005923 ORTHO05D007376 1.8e-26 122.9 183 42.6
Glyma.09G248100 Glycine max HOM05D005923 ORTHO05D007376 3.1e-26 122.1 123 53.7
Sed0021637 Sechium edule HOM05D005923 ORTHO05D007376 4.0e-26 121.7 123 50.4
Ah.04g159240 Amaranthus hybridus HOM05D005923 ORTHO05D007376 5.3e-26 121.3 123 51.2
Lsat_1_v5_gn_0_14641 Lactuca sativa HOM05D005923 ORTHO05D007376 2.0e-25 119.4 127 49.6
Aqoxy2G04094 Aquilegia oxysepala HOM05D005923 ORTHO05D007376 3.4e-25 118.6 123 52.8
Ca_08014_v3 Cicer arietinum L. HOM05D005923 ORTHO05D007376 3.4e-25 118.6 123 50.4
Os01g0894000 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 3.4e-25 118.6 124 48.4
THA.LOC104827232 Tarenaya hassleriana HOM05D005923 ORTHO05D007376 5.8e-25 117.9 125 52.8
Psat3g105160 Pisum sativum HOM05D005923 ORTHO05D007376 7.6e-25 117.5 123 50.4
MSTRG.27409 Avicennia marina HOM05D005923 ORTHO05D007376 1.0e-24 117.1 126 51.6
arahy.Tifrunner.gnm1.ann1.VQ08NH Arachis hypogaea HOM05D005923 ORTHO05D007376 1.7e-24 116.3 123 52.8
Cpa.g.sc99.42 Carica papaya HOM05D005923 ORTHO05D007376 2.2e-24 115.9 123 54.5
Hund21927 Selenicereus undatus HOM05D005923 ORTHO05D007376 3.8e-24 115.2 123 48.0
arahy.Tifrunner.gnm1.ann1.51VLQD Arachis hypogaea HOM05D005923 ORTHO05D007376 6.5e-24 114.4 123 52.0
Dinv21358 Davidia involucrata HOM05D005923 ORTHO05D007376 8.4e-24 114.0 88 64.8
SalBow1G7804 Salvia bowleyana HOM05D005923 ORTHO05D007376 2.5e-23 112.5 126 50.0
HPP92_013562 Vanilla planifolia HOM05D005923 ORTHO05D007376 5.5e-23 111.3 123 46.3
Migut.F02096 Erythranthe guttata HOM05D005923 ORTHO05D007376 2.1e-22 109.4 125 47.2
Prupe.6G364500 Prunus persica HOM05D005923 ORTHO05D007376 2.1e-22 109.4 88 62.5
Zm00001eb144980 Zea mays HOM05D005923 ORTHO05D007376 2.7e-22 109.0 125 47.2
Thhalv10020144m.g Eutrema salsugineum HOM05D005923 ORTHO05D007376 1.8e-21 106.3 123 47.2
Sp3g02330 Schrenkiella parvula HOM05D005923 ORTHO05D007376 1.8e-21 106.3 123 50.4
A05p43880 Brassica napus HOM05D005923 ORTHO05D007376 3.0e-21 105.5 123 49.6
C05p63470 Brassica napus HOM05D005923 ORTHO05D007376 3.0e-21 105.5 123 49.6
BolC5t35012H Brassica oleracea HOM05D005923 ORTHO05D007376 3.0e-21 105.5 123 49.6
BraA05t23125Z Brassica rapa HOM05D005923 ORTHO05D007376 8.7e-21 104.0 123 48.8
CARHR077340 Cardamine hirsuta HOM05D005923 ORTHO05D007376 8.7e-21 104.0 126 47.6
vmacro19542 Vaccinium macrocarpon HOM05D005923 ORTHO05D007376 1.1e-20 103.6 106 50.9
ATR0824G241 Amborella trichopoda HOM05D005923 ORTHO05D007376 1.3e-19 100.1 127 44.9
Carub.0003s0247 Capsella rubella HOM05D005923 ORTHO05D007376 1.3e-19 100.1 123 44.7
AL3G12930 Arabidopsis lyrata HOM05D005923 ORTHO05D007376 2.2e-19 99.4 123 48.0
AT3G03305 Arabidopsis thaliana HOM05D005923 ORTHO05D007376 1.1e-18 97.1 123 47.2
Aa31LG5G13800 Aethionema arabicum HOM05D005923 ORTHO05D000304 2.6e-17 92.4 109 46.8
Lj8A198T52 Lonicera japonica HOM05D005923 ORTHO05D007376 4.5e-17 91.7 124 43.5
BcaC05g30305 Brassica carinata HOM05D000399 ORTHO05D000304 1.3e-16 90.1 114 47.4
SGA_v2.0_scaffold62G21491 Striga asiatica HOM05D005923 ORTHO05D007376 2.9e-16 89.0 125 40.0
Atru.chr12.1696 Acer truncatum HOM05D005923 ORTHO05D007376 2.1e-14 82.8 44 97.7
Atru.chr12.1663 Acer truncatum HOM05D005923 ORTHO05D007376 7.9e-14 80.9 39 97.4
MBI08_g20603_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 1.0e-13 80.5 125 43.2
Atru.chr12.1658 Acer truncatum HOM05D005923 ORTHO05D007376 9.7e-12 73.9 43 83.7
Cc09_g04040 Coffea canephora HOM05D005923 ORTHO05D007376 4.8e-11 71.6 88 48.9
Os07g0274100 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 2.6e-09 65.9 128 32.0
SalBow1G1244 Salvia bowleyana HOM05D005923 ORTHO05D007376 3.8e-08 62.0 88 46.6
unitig_46.g18570 Utricularia gibba HOM05D005923 ORTHO05D007376 5.0e-08 61.6 69 43.5


User provided reference genes

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