Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.1645 Acer truncatum HOM05D000070 ORTHO05D007358 4.6e-132 474.6 235 100.0
Atru.chr12.1313 Acer truncatum HOM05D000070 ORTHO05D007358 2.6e-71 272.7 260 63.1
Ciclev10013654m.g Citrus clementina HOM05D000070 ORTHO05D007358 4.1e-56 222.2 253 52.6
Thecc.03G306800 Theobroma cacao HOM05D000070 ORTHO05D007358 1.0e-54 217.6 261 49.0
Gohir.D08G175400 Gossypium hirsutum HOM05D000070 ORTHO05D007358 1.8e-51 206.8 261 48.3
Gorai.004G183300 Gossypium raimondii HOM05D000070 ORTHO05D007358 8.8e-51 204.5 261 47.9
Gohir.A08G154900 Gossypium hirsutum HOM05D000070 ORTHO05D007358 3.3e-50 202.6 261 47.9
Duzib084G0952 Durio zibethinus HOM05D000070 ORTHO05D007358 1.7e-49 200.3 261 46.4
Potri.006G035000 Populus trichocarpa HOM05D000070 ORTHO05D007358 2.2e-49 199.9 268 47.0
COL.COLO4_16973 Corchorus olitorius HOM05D000070 ORTHO05D007358 2.8e-49 199.5 261 45.2
GSVIVG01025783001 Vitis vinifera HOM05D000070 ORTHO05D007358 3.1e-48 196.1 260 46.2
Cpa.g.sc5.153 Carica papaya HOM05D000070 ORTHO05D007358 2.6e-47 193.0 253 46.2
Manes.08G062100 Manihot esculenta HOM05D000070 ORTHO05D007358 2.6e-47 193.0 253 46.2
Sabra06G0023400 Salix brachista HOM05D000070 ORTHO05D007358 2.6e-47 193.0 260 46.2
CSS0017562 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D007358 9.4e-45 184.5 266 44.0
QL07p012633 Quercus lobata HOM05D000070 ORTHO05D007358 2.3e-43 179.9 263 44.1
TAR636G1288 Trochodendron aralioides HOM05D000070 ORTHO05D007358 9.7e-42 174.5 270 45.9
Dinv20771 Davidia involucrata HOM05D000070 ORTHO05D007358 2.8e-41 172.9 254 45.7
Dinv40077 Davidia involucrata HOM05D000070 ORTHO05D007358 1.1e-40 171.0 248 42.7
vmacro04768 Vaccinium macrocarpon HOM05D000070 ORTHO05D007358 7.2e-37 158.3 254 42.1
Prupe.3G062600 Prunus persica HOM05D000070 ORTHO05D007358 1.2e-36 157.5 263 39.5
Rhsim07G0200300 Rhododendron simsii HOM05D000070 ORTHO05D007358 3.0e-35 152.9 254 40.9
PGR142G2226 Punica granatum HOM05D000070 ORTHO05D007358 8.8e-35 151.4 266 39.8
FAN09G2492 Fragaria x ananassa HOM05D000070 ORTHO05D007358 2.0e-34 150.2 266 40.6
Sp5g05880 Schrenkiella parvula HOM05D000070 ORTHO05D007358 5.7e-34 148.7 250 40.0
CARHR166810 Cardamine hirsuta HOM05D000070 ORTHO05D007358 2.8e-33 146.4 250 40.8
MD09G1206200 Malus domestica HOM05D000070 ORTHO05D007358 2.8e-33 146.4 266 38.3
Haze_20262 Corylus avellana HOM05D000070 ORTHO05D007358 3.7e-33 146.0 167 50.3
Eucgr.K01669 Eucalyptus grandis HOM05D000070 ORTHO05D007358 6.3e-33 145.2 229 42.4
ClCG09G015840 Citrullus lanatus HOM05D000070 ORTHO05D007358 1.8e-32 143.7 260 36.9
Carub.0005s2343 Capsella rubella HOM05D000070 ORTHO05D007358 2.4e-32 143.3 264 38.6
FvH4_6g32040 Fragaria vesca HOM05D000070 ORTHO05D007358 2.4e-32 143.3 268 39.6
Thhalv10005761m.g Eutrema salsugineum HOM05D000070 ORTHO05D007358 3.1e-32 142.9 251 39.0
FAN14G4524 Fragaria x ananassa HOM05D000070 ORTHO05D007358 3.1e-32 142.9 268 39.6
AL5G38060 Arabidopsis lyrata HOM05D000070 ORTHO05D007358 5.4e-32 142.1 249 39.8
FAN02G0829 Fragaria x ananassa HOM05D000070 ORTHO05D007358 1.2e-31 141.0 266 39.1
Thhalv10006379m.g Eutrema salsugineum HOM05D000070 ORTHO05D007358 5.9e-31 138.7 246 38.2
FAN05G1937 Fragaria x ananassa HOM05D000070 ORTHO05D007358 1.3e-30 137.5 266 38.3
Sed0024109 Sechium edule HOM05D000070 ORTHO05D007358 1.3e-30 137.5 257 37.0
Lalb_Chr14g0365611 Lupinus albus HOM05D000070 ORTHO05D007358 1.7e-30 137.1 267 38.2
Haze_05085 Corylus avellana HOM05D000070 ORTHO05D007358 2.2e-30 136.7 232 42.7
CsaV3_7G008770 Cucumis sativus L. HOM05D000070 ORTHO05D007358 2.2e-30 136.7 253 36.4
AT3G56690 Arabidopsis thaliana HOM05D000070 ORTHO05D007358 5.0e-30 135.6 250 39.2
MELO3C018435.2 Cucumis melo HOM05D000070 ORTHO05D007358 1.1e-29 134.4 253 36.4
Actinidia12855 Actinidia chinensis HOM05D000070 ORTHO05D007358 2.5e-29 133.3 221 41.6
MSTRG.6311 Avicennia marina HOM05D000070 ORTHO05D007358 2.5e-29 133.3 254 38.6
THA.LOC104824382 Tarenaya hassleriana HOM05D000070 ORTHO05D007358 2.5e-29 133.3 256 40.6
Aqoxy5G00447 Aquilegia oxysepala HOM05D000070 ORTHO05D007358 5.5e-29 132.1 262 37.0
arahy.Tifrunner.gnm1.ann1.GDL09X Arachis hypogaea HOM05D000070 ORTHO05D007358 5.5e-29 132.1 263 37.3
Nitab4.5_0000123g0590 Nicotiana tabacum HOM05D000070 ORTHO05D007358 5.5e-29 132.1 256 39.1
Nitab4.5_0008332g0030 Nicotiana tabacum HOM05D000070 ORTHO05D007358 1.2e-28 131.0 256 39.1
DCAR_020593 Daucus carota HOM05D000070 ORTHO05D007358 6.1e-28 128.6 268 36.6
RcHm_v2.0_Chr2g0139701 Rosa chinensis HOM05D000070 ORTHO05D007358 8.0e-28 128.3 168 45.2
Sopen10g028980 Solanum pennellii HOM05D000070 ORTHO05D007358 1.4e-27 127.5 263 35.7
Lj1g0022985 Lotus japonicus HOM05D000070 ORTHO05D007358 4.0e-27 125.9 264 36.0
BcaC07g40128 Brassica carinata HOM05D000070 ORTHO05D007358 1.2e-26 124.4 250 37.6
Migut.J01627 Erythranthe guttata HOM05D000070 ORTHO05D007358 2.6e-26 123.2 262 35.9
Solyc10g078320.2 Solanum lycopersicum HOM05D000070 ORTHO05D007358 2.6e-26 123.2 263 35.0
Lj1C1085G1 Lonicera japonica HOM05D000070 ORTHO05D007358 3.4e-26 122.9 156 47.4
A09p49520 Brassica napus HOM05D000070 ORTHO05D007358 5.7e-26 122.1 219 39.3
BraA09t40406Z Brassica rapa HOM05D000070 ORTHO05D007358 5.7e-26 122.1 219 39.3
arahy.Tifrunner.gnm1.ann1.YU3HKG Arachis hypogaea HOM05D000070 ORTHO05D007358 9.8e-26 121.3 244 36.1
MBI06_g17222_MAGBIO Magnolia biondii HOM05D000070 ORTHO05D007358 9.8e-26 121.3 241 37.8
Peaxi162Scf00003g05131 Petunia axillaris HOM05D000070 ORTHO05D007358 9.8e-26 121.3 219 37.0
Aa31LG10G14780 Aethionema arabicum HOM05D000070 ORTHO05D007358 1.7e-25 120.6 269 36.8
C08p31920 Brassica napus HOM05D000070 ORTHO05D007358 4.9e-25 119.0 244 36.9
Glyma.03G123500 Glycine max HOM05D000070 ORTHO05D007358 4.9e-25 119.0 265 34.0
Hma1.2p1_1022F.1_g248720 Hydrangea macrophylla HOM05D000070 ORTHO05D007358 4.9e-25 119.0 254 37.4
Oeu005223.1 Olea europaea HOM05D000070 ORTHO05D007358 8.3e-25 118.2 268 33.2
CAN.G960.72 Capsicum annuum HOM05D000070 ORTHO05D007358 1.4e-24 117.5 255 33.3
Phvul.001G119600 Phaseolus vulgaris HOM05D000070 ORTHO05D007358 2.4e-24 116.7 268 32.5
Psat3g081080 Pisum sativum HOM05D000070 ORTHO05D007358 4.1e-24 115.9 265 34.0
BcaC07g39973 Brassica carinata HOM05D000070 ORTHO05D007358 5.4e-24 115.5 218 37.6
BolC8t50809H Brassica oleracea HOM05D000070 ORTHO05D007358 5.4e-24 115.5 218 37.6
VMungo1383G0846 Vigna mungo HOM05D000070 ORTHO05D007358 3.5e-23 112.8 268 31.3
SalBow6G2908 Salvia bowleyana HOM05D000070 ORTHO05D007358 1.0e-22 111.3 265 36.2
Ca_08370_v3 Cicer arietinum L. HOM05D000070 ORTHO05D007358 2.3e-22 110.2 283 31.1
AUR62030281 Chenopodium quinoa HOM05D000070 ORTHO05D007358 6.6e-22 108.6 142 40.1
Cc06_g20150 Coffea canephora HOM05D000070 ORTHO05D007358 2.5e-21 106.7 264 31.8
PSO384G4037 Papaver somniferum HOM05D000070 ORTHO05D007358 4.3e-21 105.9 258 34.5
HanXRQChr13g0406801 Helianthus annuus HOM05D000070 ORTHO05D007358 5.6e-21 105.5 235 36.2
EL10Ac3g07273 Beta vulgaris HOM05D000070 ORTHO05D007358 1.2e-20 104.4 256 32.4
SGA_v2.0_scaffold66G22283 Striga asiatica HOM05D000070 ORTHO05D007358 2.8e-20 103.2 233 36.5
Hund19077 Selenicereus undatus HOM05D000070 ORTHO05D007358 1.0e-19 101.3 266 32.7
Lsat_1_v5_gn_7_62300 Lactuca sativa HOM05D000070 ORTHO05D007358 3.0e-19 99.8 242 33.1
PSO339G6190 Papaver somniferum HOM05D000070 ORTHO05D007358 4.0e-19 99.4 258 33.7
AUR62018382 Chenopodium quinoa HOM05D000070 ORTHO05D007358 5.2e-19 99.0 142 39.4
ECA248G2711 Erigeron canadensis HOM05D000070 ORTHO05D007358 1.2e-18 97.8 167 37.1
AUR62043208 Chenopodium quinoa HOM05D000070 ORTHO05D007358 2.0e-18 97.1 142 38.0
CDE05G3455 Ceratophyllum demersum HOM05D000070 ORTHO05D007358 4.4e-18 95.9 230 32.6
TPR.G22681 Trifolium pratense HOM05D000070 ORTHO05D007358 2.9e-17 93.2 282 29.8
CDE07G0994 Ceratophyllum demersum HOM05D000070 ORTHO05D007358 2.4e-16 90.1 189 32.8
Medtr7g088830 Medicago truncatula HOM05D000070 ORTHO05D007358 2.0e-15 87.0 270 29.3
Nn7g36932 Nelumbo nucifera HOM05D000070 ORTHO05D007358 6.6e-14 82.0 199 32.7
ATR0820G242 Amborella trichopoda HOM05D000070 ORTHO05D007358 8.6e-14 81.6 234 33.3
Actinidia29575 Actinidia chinensis HOM05D000070 ORTHO05D007358 1.5e-13 80.9 119 45.4
Medtr7g089040 Medicago truncatula HOM05D000070 ORTHO05D007358 2.8e-12 76.6 139 35.3
Hma1.2p1_1423F.1_g282610 Hydrangea macrophylla HOM05D000070 ORTHO05D007358 8.0e-12 75.1 157 36.9
arahy.Tifrunner.gnm1.ann1.BZDA7C Arachis hypogaea HOM05D000493 ORTHO05D000037 1.8e-11 73.9 162 33.3
Sc19g0008040 Simmondsia chinensis HOM05D000070 ORTHO05D007358 4.0e-11 72.8 151 35.1
ATR1096G065 Amborella trichopoda HOM05D000070 ORTHO05D007358 5.2e-11 72.4 238 31.9
HPP92_005675 Vanilla planifolia HOM05D000070 ORTHO05D007358 2.0e-10 70.5 223 29.1
SEGI_06917 Sequoiadendron giganteum HOM05D000070 ORTHO05D007358 4.4e-10 69.3 143 32.2
unitig_21.g20681 Utricularia gibba HOM05D000070 ORTHO05D007358 9.2e-08 61.6 246 28.5
Os11g0220400 Oryza sativa ssp. japonica HOM05D000070 ORTHO05D007358 2.7e-07 60.1 239 28.0
Zm00001eb169190 Zea mays HOM05D000070 ORTHO05D007358 3.0e-06 56.6 194 26.3


User provided reference genes

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