Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 1.8e-133 479.2 233 100.0
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 5.6e-98 361.3 234 74.4
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 1.4e-96 356.7 234 76.5
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 6.8e-96 354.4 229 76.0
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 5.8e-95 351.3 229 72.9
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 1.7e-94 349.7 237 71.3
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 2.9e-94 349.0 231 71.9
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 3.7e-94 348.6 233 70.8
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 4.9e-94 348.2 236 73.3
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 1.4e-93 346.7 239 71.1
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 2.4e-93 345.9 234 73.1
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 2.0e-92 342.8 240 70.8
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 3.5e-92 342.0 233 71.7
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 7.8e-92 340.9 228 71.1
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.7e-91 339.7 232 70.7
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 2.3e-91 339.3 234 73.5
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 3.0e-91 339.0 234 73.1
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 7.3e-90 334.3 238 71.4
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 1.2e-89 333.6 204 79.9
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 1.4e-88 330.1 236 71.2
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 4.0e-88 328.6 238 69.3
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 5.2e-88 328.2 234 67.9
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 1.2e-87 327.0 233 70.0
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 2.0e-87 326.2 228 66.7
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 4.4e-87 325.1 238 68.9
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 4.6e-84 315.1 214 72.4
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 9.5e-82 307.4 245 66.5
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 9.5e-82 307.4 232 64.7
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 2.1e-81 306.2 230 64.8
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 2.8e-81 305.8 231 64.5
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 2.3e-80 302.8 232 62.9
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 8.9e-80 300.8 232 62.9
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 3.2e-77 292.4 222 66.2
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 5.4e-77 291.6 240 62.9
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 5.4e-77 291.6 246 62.6
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 5.4e-77 291.6 237 61.6
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 3.5e-76 288.9 232 59.9
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 4.6e-76 288.5 216 64.8
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 4.6e-76 288.5 214 67.8
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 6.0e-76 288.1 187 73.3
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 6.0e-76 288.1 235 60.9
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 1.0e-75 287.3 234 62.0
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.0e-75 287.3 237 60.3
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 1.0e-75 287.3 252 60.7
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 2.3e-75 286.2 212 66.0
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 3.0e-75 285.8 238 59.7
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 3.9e-75 285.4 232 59.5
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 8.6e-75 284.3 236 62.3
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 8.6e-75 284.3 237 61.2
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 8.6e-75 284.3 262 58.0
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 2.5e-74 282.7 235 59.1
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 4.3e-74 282.0 249 60.6
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.3e-74 282.0 220 64.5
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 7.3e-74 281.2 253 60.1
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 7.3e-74 281.2 231 61.5
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 1.6e-73 280.0 231 62.3
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 2.8e-73 279.3 193 69.9
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 4.7e-73 278.5 232 61.2
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 1.1e-72 277.3 220 64.5
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 1.1e-72 277.3 228 61.8
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 1.8e-72 276.6 232 61.6
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 1.8e-72 276.6 232 62.5
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 1.8e-72 276.6 236 57.6
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 6.9e-72 274.6 229 63.3
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 6.9e-72 274.6 233 60.1
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 6.9e-72 274.6 236 58.1
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 2.0e-71 273.1 183 73.8
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 3.4e-71 272.3 235 61.3
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 3.4e-71 272.3 216 61.6
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 7.6e-71 271.2 231 59.3
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 7.6e-71 271.2 227 60.8
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 1.2e-68 263.8 229 61.6
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 1.2e-68 263.8 276 52.9
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 3.5e-68 262.3 215 61.9
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 3.5e-68 262.3 215 61.9
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 6.0e-68 261.5 232 61.6
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 6.6e-67 258.1 232 60.8
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 8.7e-67 257.7 277 52.3
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 2.5e-66 256.1 171 74.9
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 7.3e-66 254.6 220 57.3
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 4.8e-65 251.9 231 54.1
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 1.1e-64 250.8 233 55.8
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 6.4e-62 241.5 203 61.6
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 3.2e-61 239.2 219 53.4
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 7.9e-60 234.6 182 65.4
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 5.1e-59 231.9 230 57.4
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 5.1e-59 231.9 151 68.2
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 6.7e-59 231.5 196 58.7
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 1.9e-58 229.9 178 61.2
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 9.6e-58 227.6 236 53.4
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 3.1e-56 222.6 225 54.2
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 1.5e-55 220.3 169 65.1
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 1.4e-53 213.8 144 72.9
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.6e-52 208.8 172 59.9
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 1.3e-51 207.2 206 53.9
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 6.7e-51 204.9 216 47.2
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.7e-49 199.1 192 54.7
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.5e-45 186.4 155 63.2
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 4.8e-41 172.2 143 64.3
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 3.1e-40 169.5 159 56.6
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 3.4e-39 166.0 207 44.4
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 5.9e-39 165.2 209 44.0
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 7.6e-39 164.9 205 44.9
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 1.4e-37 160.6 115 65.2
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 1.8e-24 117.1 160 44.4
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 1.7e-22 110.5 60 76.7
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.2e-21 106.3 71 69.0
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 9.4e-21 104.8 69 69.6
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 4.4e-18 95.9 138 35.5
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.0e-14 84.7 64 68.8
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.3e-14 84.3 175 37.7
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 8.5e-14 81.6 151 33.1
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 1.1e-13 81.3 97 46.4
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 1.1e-13 81.3 177 31.1
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 1.8e-11 73.9 83 44.6
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 4.4e-10 69.3 37 73.0
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 5.7e-10 68.9 56 55.4
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 2.2e-09 67.0 36 72.2
QL12p005529 Quercus lobata HOM05D002896 ORTHO05D003263 5.3e-08 62.4 41 75.6
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.2e-07 61.2 96 42.7
CAN.G1161.15 Capsicum annuum HOM05D000064 ORTHO05D007563 2.2e-06 57.0 41 53.7
AagrBONN_evm.TU.Sc2ySwM_344.2366 Anthoceros agrestis HOM05D006411 ORTHO05D007563 8.5e-06 55.1 71 42.3


User provided reference genes

Program Settings