Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 1.3e-241 839.3 426 100.0
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 2.1e-172 609.4 436 73.2
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 1.4e-171 606.7 429 73.2
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 1.6e-167 593.2 426 71.1
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 4.6e-167 591.7 425 73.2
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 1.8e-166 589.7 438 70.1
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 2.5e-165 585.9 420 71.9
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.9e-161 572.4 431 69.8
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 2.9e-161 572.4 419 70.4
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 5.0e-161 571.6 431 69.8
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 3.0e-158 562.4 432 68.8
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 5.1e-158 561.6 408 71.3
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 4.3e-157 558.5 434 68.2
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 7.4e-157 557.8 429 69.5
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 3.7e-156 555.4 410 70.5
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 6.3e-156 554.7 396 72.5
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 1.8e-155 553.1 406 70.4
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 2.0e-154 549.7 414 69.1
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 2.6e-154 549.3 414 69.1
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 4.5e-154 548.5 424 67.2
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 2.2e-153 546.2 418 68.2
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 5.0e-153 545.0 411 69.1
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 1.1e-152 543.9 425 67.3
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 3.2e-152 542.3 385 72.2
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 7.2e-152 541.2 414 67.9
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 9.4e-152 540.8 424 66.7
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 9.4e-152 540.8 394 70.8
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 2.1e-151 539.7 400 70.5
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 2.1e-151 539.7 426 67.6
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 2.7e-151 539.3 430 66.0
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 3.6e-151 538.9 426 66.9
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 3.6e-151 538.9 425 66.1
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 3.6e-151 538.9 429 66.7
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 6.1e-151 538.1 385 70.6
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 7.9e-151 537.7 428 66.8
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 1.0e-150 537.3 416 68.8
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 2.3e-150 536.2 434 65.4
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 1.1e-149 533.9 433 65.1
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 2.6e-149 532.7 431 64.7
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 2.6e-149 532.7 389 70.7
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 6.3e-148 528.1 383 70.2
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 2.4e-147 526.2 412 66.7
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 2.5e-144 516.2 435 65.1
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 2.0e-141 506.5 403 66.0
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 3.7e-140 502.3 383 65.5
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 8.2e-140 501.1 383 65.3
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 1.1e-139 500.7 383 64.8
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 1.4e-139 500.4 383 67.1
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 1.2e-138 497.3 437 61.6
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 1.9e-136 490.0 387 65.1
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 3.2e-136 489.2 426 61.0
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 2.7e-135 486.1 421 62.5
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.0e-134 484.2 372 68.0
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.8e-134 483.4 383 64.2
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 2.3e-134 483.0 397 64.0
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 2.3e-134 483.0 424 60.6
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 5.2e-134 481.9 426 59.6
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 8.8e-134 481.1 373 67.6
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 1.2e-133 480.7 409 60.4
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 2.0e-133 479.9 382 64.7
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 5.7e-133 478.4 413 61.0
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 9.7e-133 477.6 394 64.7
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 1.4e-131 473.8 424 59.9
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 7.0e-131 471.5 335 69.9
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 5.9e-130 468.4 404 63.6
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 1.3e-129 467.2 414 60.9
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 1.3e-124 450.7 431 58.5
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 2.2e-124 449.9 460 55.2
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 3.7e-124 449.1 397 61.2
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 2.7e-122 443.0 416 58.7
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 3.5e-122 442.6 360 63.1
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 5.9e-122 441.8 382 61.3
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 3.3e-120 436.0 331 65.0
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 7.8e-114 414.8 394 57.4
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 1.0e-113 414.5 405 56.3
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.9e-104 383.6 316 62.7
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 2.3e-102 376.7 294 66.0
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 2.6e-101 373.2 258 74.0
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 2.4e-99 366.7 415 49.6
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 8.6e-97 358.2 276 68.1
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 2.1e-82 310.5 265 63.0
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 2.1e-71 273.9 265 57.7
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 2.1e-66 257.3 408 39.7
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 2.4e-62 243.8 415 38.3
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 1.2e-61 241.5 379 39.6
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 8.7e-57 225.3 245 52.2
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 1.2e-53 214.9 179 63.1
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 4.9e-52 209.5 220 54.5
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 2.4e-46 190.7 166 59.6
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 3.3e-40 170.2 160 56.9
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.2e-37 161.8 119 66.4
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 1.2e-13 82.0 256 28.1
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 4.5e-13 80.1 81 50.6
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 1.6e-10 71.6 70 51.4
MD02G1286500 Malus domestica HOM05D007414 ORTHO05D009482 4.7e-10 70.1 74 52.7
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 8.0e-10 69.3 69 59.4
TPR.G34603 Trifolium pratense HOM05D007414 ORTHO05D009482 1.5e-08 65.1 61 57.4
Oeu014631.1 Olea europaea HOM05D007414 ORTHO05D009482 2.0e-08 64.7 53 67.9
Sabra03G0146300 Salix brachista HOM05D007414 ORTHO05D009482 3.4e-08 63.9 44 65.9
PRCOL_00006348 Prasinoderma coloniale HOM05D007414 ORTHO05D333730 1.4e-06 58.5 117 35.0
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.4e-06 58.5 289 26.6
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 2.4e-06 57.8 429 23.3
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 3.1e-06 57.4 476 23.3
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 4.1e-06 57.0 281 25.3
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 5.4e-06 56.6 285 24.9
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 5.4e-06 56.6 405 23.2
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 7.0e-06 56.2 239 26.8


User provided reference genes

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