Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 2.4e-69 265.4 133 100.0
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 5.0e-59 231.1 133 82.0
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 2.5e-58 228.8 133 82.0
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 5.5e-58 227.6 133 82.0
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 1.6e-57 226.1 133 80.5
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 4.6e-57 224.6 133 80.5
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 6.1e-57 224.2 133 81.2
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.8e-56 222.6 133 78.9
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 1.8e-56 222.6 133 78.9
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 1.8e-56 222.6 133 80.5
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.9e-56 221.5 133 78.9
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 1.5e-55 219.5 133 82.0
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 5.7e-55 217.6 133 78.2
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 2.8e-54 215.3 131 77.1
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 2.8e-54 215.3 133 75.2
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 3.7e-54 214.9 133 78.2
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 2.4e-53 212.2 133 77.4
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 4.1e-53 211.5 133 76.7
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 2.6e-52 208.8 133 72.9
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 3.4e-52 208.4 133 75.2
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 3.4e-52 208.4 133 75.2
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 3.4e-52 208.4 133 74.4
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 5.9e-52 207.6 133 73.7
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 5.9e-52 207.6 133 75.2
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 7.7e-52 207.2 131 74.0
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 7.7e-52 207.2 133 75.2
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 1.0e-51 206.8 133 75.2
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 1.7e-51 206.1 131 72.5
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 2.9e-51 205.3 133 73.7
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 3.8e-51 204.9 141 70.9
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 3.8e-51 204.9 131 75.6
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 3.8e-51 204.9 131 76.3
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 5.0e-51 204.5 133 72.9
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 6.5e-51 204.1 133 73.7
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 6.5e-51 204.1 133 73.7
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 6.5e-51 204.1 133 72.9
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 6.5e-51 204.1 132 72.7
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 8.5e-51 203.8 133 72.9
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-50 203.4 133 73.7
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-50 203.4 133 73.7
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 1.1e-50 203.4 132 74.2
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 1.4e-50 203.0 131 74.8
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.9e-50 202.6 125 75.2
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.9e-50 202.6 125 75.2
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 1.9e-50 202.6 133 73.7
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 1.9e-50 202.6 133 72.9
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 3.2e-50 201.8 128 75.0
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 3.2e-50 201.8 133 74.4
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 9.4e-50 200.3 129 75.2
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 2.1e-49 199.1 133 72.9
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 3.6e-49 198.4 133 72.9
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 4.7e-49 198.0 126 73.8
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 7.9e-49 197.2 131 69.5
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 3.0e-48 195.3 133 68.4
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 8.8e-48 193.7 131 72.5
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 8.8e-48 193.7 125 72.0
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 8.8e-48 193.7 132 71.2
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 1.1e-47 193.4 131 72.5
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 1.1e-47 193.4 133 68.4
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 1.5e-47 193.0 136 70.6
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 2.0e-47 192.6 131 67.9
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 2.0e-47 192.6 130 66.9
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 3.3e-47 191.8 131 71.8
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 3.3e-47 191.8 131 71.8
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 3.3e-47 191.8 131 71.8
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 7.4e-47 190.7 131 66.4
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 7.4e-47 190.7 131 71.0
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 7.4e-47 190.7 131 69.5
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 1.3e-46 189.9 131 69.5
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 1.7e-46 189.5 131 69.5
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 1.7e-46 189.5 133 71.4
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 2.2e-46 189.1 131 69.5
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 3.7e-46 188.3 125 69.6
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 3.7e-46 188.3 131 68.7
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 3.7e-46 188.3 131 68.7
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 4.8e-46 188.0 125 71.2
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 4.8e-46 188.0 123 70.7
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 4.8e-46 188.0 132 65.9
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 6.3e-46 187.6 131 66.4
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 6.3e-46 187.6 131 66.4
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 8.2e-46 187.2 132 65.2
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 8.2e-46 187.2 128 67.2
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 1.4e-45 186.4 131 67.9
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 1.8e-45 186.0 132 63.6
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 2.4e-45 185.7 131 65.6
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 3.1e-45 185.3 133 67.7
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 5.3e-45 184.5 140 67.1
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 5.3e-45 184.5 129 68.2
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 9.1e-45 183.7 141 66.7
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 9.1e-45 183.7 131 64.9
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 9.1e-45 183.7 132 63.6
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 1.2e-44 183.3 134 66.4
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 1.5e-44 183.0 140 65.7
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 1.5e-44 183.0 129 68.2
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 2.0e-44 182.6 144 65.3
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 4.5e-44 181.4 140 65.0
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 4.5e-44 181.4 127 69.3
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 4.5e-44 181.4 129 66.7
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 5.9e-44 181.0 133 66.2
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 1.0e-43 180.3 138 65.2
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 1.0e-43 180.3 138 65.2
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.7e-43 179.5 158 55.7
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 2.9e-43 178.7 133 63.9
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 3.8e-43 178.3 125 68.8
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 8.5e-43 177.2 129 66.7
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 8.5e-43 177.2 133 63.2
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 1.1e-42 176.8 129 66.7
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 2.0e-39 166.0 133 60.2
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 5.7e-39 164.5 172 49.4
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 9.7e-39 163.7 133 59.4
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 6.3e-38 161.0 131 60.3
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 5.9e-36 154.5 104 72.1
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 8.5e-35 150.6 130 56.9
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 1.1e-34 150.2 131 56.5
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 2.3e-32 142.5 95 71.6
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 8.8e-32 140.6 127 59.1
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 3.4e-31 138.7 129 54.3
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 6.3e-30 134.4 134 50.0
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 1.8e-29 132.9 129 51.9
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 3.5e-28 128.6 93 63.4
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 8.5e-27 124.0 71 84.5
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 2.1e-25 119.4 71 80.3
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 3.6e-25 118.6 75 74.7
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 1.4e-24 116.7 72 77.8
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.0e-24 115.5 75 73.3
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 4.4e-23 111.7 76 68.4
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 7.5e-23 110.9 71 74.6
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 2.2e-22 109.4 62 82.3
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 2.8e-22 109.0 62 82.3
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 2.8e-22 109.0 62 82.3
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 2.0e-20 102.8 65 73.8
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 2.7e-20 102.4 130 40.8
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 4.5e-20 101.7 62 75.8
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 7.7e-20 100.9 72 63.9
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 1.3e-19 100.1 70 68.6
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 3.8e-19 98.6 77 59.7
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 1.1e-18 97.1 76 61.8
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 4.2e-18 95.1 78 61.5
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 2.0e-15 86.3 64 65.6
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 4.4e-15 85.1 77 57.1
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 3.2e-13 79.0 74 50.0
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 4.1e-13 78.6 53 67.9
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 1.2e-12 77.0 56 62.5
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 7.8e-12 74.3 116 34.5
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 1.0e-08 63.9 58 50.0
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 6.8e-08 61.2 88 33.0
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 8.9e-08 60.8 130 27.7
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 3.4e-07 58.9 76 34.2
PGSC0003DMG400003395 Solanum tuberosum HOM05D005138 ORTHO05D006318 8.3e-06 54.3 50 46.0


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