Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 1.8e-259 899.0 571 100.0
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 3.1e-81 307.0 528 42.2
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 1.3e-79 301.6 364 53.6
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 1.4e-73 281.6 297 56.6
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 6.8e-73 279.3 645 37.5
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 9.2e-70 268.9 313 54.0
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 6.6e-68 262.7 299 55.2
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 6.6e-68 262.7 296 53.7
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 1.5e-67 261.5 294 55.1
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.9e-67 261.2 289 54.0
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 4.3e-67 260.0 289 54.0
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 1.1e-65 255.4 349 48.7
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 6.8e-65 252.7 580 39.1
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 8.9e-65 252.3 371 46.4
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 1.2e-64 251.9 316 51.6
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 4.4e-64 250.0 592 42.4
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 1.7e-63 248.1 353 48.7
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 3.7e-63 246.9 333 46.2
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 4.9e-63 246.5 389 44.0
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 5.4e-62 243.0 323 52.6
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 3.9e-60 236.9 365 47.1
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.6e-58 231.5 364 46.2
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 1.6e-58 231.5 323 47.7
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 3.6e-58 230.3 368 45.4
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 1.8e-57 228.0 364 45.9
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 5.2e-57 226.5 341 44.9
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 8.9e-57 225.7 322 50.9
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 3.4e-56 223.8 362 45.9
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 7.6e-56 222.6 292 50.0
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 7.6e-56 222.6 348 43.1
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 6.0e-53 213.0 307 48.9
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 2.3e-52 211.1 500 35.4
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 6.6e-52 209.5 517 35.0
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 8.7e-52 209.1 278 51.4
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 8.7e-52 209.1 309 47.6
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 8.7e-52 209.1 353 46.5
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 8.7e-52 209.1 297 48.8
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 1.5e-51 208.4 283 48.4
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 1.5e-51 208.4 281 48.8
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 1.9e-51 208.0 314 48.4
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 2.5e-51 207.6 597 33.8
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 3.3e-51 207.2 310 46.5
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 3.3e-51 207.2 366 41.5
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 5.6e-51 206.5 212 55.7
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 5.6e-51 206.5 304 47.4
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 1.6e-50 204.9 317 46.4
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 3.6e-50 203.8 363 45.5
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 1.1e-49 202.2 280 48.6
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 2.4e-49 201.1 351 43.0
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 2.4e-49 201.1 311 44.7
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 5.3e-49 199.9 298 47.0
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 9.0e-49 199.1 290 46.6
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 1.5e-48 198.4 385 41.0
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 2.0e-48 198.0 355 43.1
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 2.6e-48 197.6 325 44.0
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 7.6e-48 196.1 293 44.0
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 6.4e-47 193.0 277 49.5
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 8.4e-47 192.6 350 43.7
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 1.4e-46 191.8 296 44.3
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 3.2e-46 190.7 334 41.6
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 5.4e-46 189.9 287 44.9
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 5.4e-46 189.9 297 45.5
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 5.4e-46 189.9 274 44.9
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 1.2e-45 188.7 277 44.0
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.2e-45 188.7 227 52.9
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 1.6e-45 188.3 323 42.4
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 2.1e-45 188.0 319 45.1
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 2.1e-45 188.0 358 41.9
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 2.7e-45 187.6 320 41.9
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 2.7e-45 187.6 282 46.1
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 3.9e-44 183.7 381 38.8
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 3.9e-44 183.7 310 44.2
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 5.1e-44 183.3 273 46.2
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 6.6e-44 183.0 305 45.2
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 8.7e-44 182.6 290 45.2
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 3.3e-43 180.6 310 43.2
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 4.3e-43 180.3 279 43.7
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 2.8e-42 177.6 280 43.6
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 2.8e-42 177.6 554 33.8
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 1.1e-41 175.6 249 46.6
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 1.4e-41 175.3 286 44.4
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 1.5e-40 171.8 301 40.9
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 3.4e-40 170.6 397 38.5
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 2.4e-38 164.5 287 43.6
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 2.7e-37 161.0 294 41.8
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 4.6e-37 160.2 282 40.8
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 2.3e-36 157.9 232 45.3
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 6.7e-36 156.4 340 39.7
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.1e-35 155.6 354 37.6
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 2.8e-34 151.0 259 41.3
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 3.7e-34 150.6 228 48.7
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 2.0e-32 144.8 292 38.0
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 2.6e-32 144.4 379 35.9
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 1.0e-31 142.5 254 39.0
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 2.9e-31 141.0 288 39.9
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 3.2e-30 137.5 294 38.4
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 3.9e-28 130.6 304 38.8
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 8.7e-28 129.4 350 37.1
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 7.4e-27 126.3 243 36.6
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 6.5e-23 113.2 203 40.9
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 8.7e-20 102.8 282 31.9
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 1.6e-18 98.6 264 35.6
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 1.8e-12 78.6 124 41.9
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 1.1e-11 75.9 163 33.7
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 3.3e-11 74.3 254 28.0
BcaB05g23323 Brassica carinata HOM05D006718 ORTHO05D008492 2.2e-10 71.6 114 42.1
Psat2g067120 Pisum sativum HOM05D006718 ORTHO05D008492 2.6e-08 64.7 113 42.5
CBR_g22941 Chara braunii HOM05D006718 ORTHO05D008492 3.4e-08 64.3 312 28.5


User provided reference genes

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