Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.1163 Acer truncatum HOM05D004210 ORTHO05D005017 1.2e-73 279.6 131 100.0
Atru.chr10.436 Acer truncatum HOM05D004210 ORTHO05D005017 2.3e-48 195.7 91 100.0
CiPaw.14G037100 Carya illinoinensis HOM05D004210 ORTHO05D005017 1.2e-46 189.9 91 96.7
Ciclev10014800m.g Citrus clementina HOM05D004210 ORTHO05D005017 1.6e-46 189.5 91 96.7
Dinv04121 Davidia involucrata HOM05D004210 ORTHO05D005017 1.6e-46 189.5 91 95.6
Actinidia18370 Actinidia chinensis HOM05D004210 ORTHO05D005017 2.1e-46 189.1 91 94.5
CANSAT56G1750 Cannabis sativa HOM05D004210 ORTHO05D005017 2.1e-46 189.1 91 97.8
Haze_03415 Corylus avellana HOM05D004210 ORTHO05D005017 2.8e-46 188.7 91 96.7
Manes.13G078700 Manihot esculenta HOM05D004210 ORTHO05D005017 2.8e-46 188.7 91 96.7
Oeu027040.1 Olea europaea HOM05D004210 ORTHO05D005017 2.8e-46 188.7 91 96.7
Cpa.g.sc138.49 Carica papaya HOM05D004210 ORTHO05D005017 3.6e-46 188.3 91 96.7
Dinv30359 Davidia involucrata HOM05D004210 ORTHO05D005017 3.6e-46 188.3 91 95.6
FAN27G0821 Fragaria x ananassa HOM05D004210 ORTHO05D005017 3.6e-46 188.3 91 95.6
Hund00055 Selenicereus undatus HOM05D004210 ORTHO05D005017 3.6e-46 188.3 91 95.6
GSVIVG01018295001 Vitis vinifera HOM05D004210 ORTHO05D005017 4.7e-46 188.0 91 94.5
BolC1t04267H Brassica oleracea HOM05D004210 ORTHO05D005017 6.2e-46 187.6 91 94.5
Manes.13G077346 Manihot esculenta HOM05D004210 ORTHO05D005017 6.2e-46 187.6 91 95.6
Oeu012473.1 Olea europaea HOM05D004210 ORTHO05D005017 6.2e-46 187.6 91 95.6
Cc08_g06030 Coffea canephora HOM05D004210 ORTHO05D005017 8.1e-46 187.2 91 94.5
ECA248G0690 Erigeron canadensis HOM05D004210 ORTHO05D005017 8.1e-46 187.2 91 94.5
Glyma.04G129500 Glycine max HOM05D004210 ORTHO05D005017 8.1e-46 187.2 91 95.6
Glyma.05G087400 Glycine max HOM05D004210 ORTHO05D005017 8.1e-46 187.2 91 95.6
Glyma.06G315900 Glycine max HOM05D004210 ORTHO05D005017 8.1e-46 187.2 91 95.6
Glyma.13G124200 Glycine max HOM05D004210 ORTHO05D005017 8.1e-46 187.2 91 95.6
Potri.001G305500 Populus trichocarpa HOM05D004210 ORTHO05D005017 8.1e-46 187.2 91 96.7
Prupe.5G058900 Prunus persica HOM05D004210 ORTHO05D005017 8.1e-46 187.2 91 95.6
vmacro20845 Vaccinium macrocarpon HOM05D004210 ORTHO05D005017 8.1e-46 187.2 91 94.5
AL249U10010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 1.1e-45 186.8 91 95.6
AL3G35010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 1.1e-45 186.8 91 95.6
AT3G21060 Arabidopsis thaliana HOM05D004210 ORTHO05D005017 1.1e-45 186.8 91 95.6
EL10Ac7g18124 Beta vulgaris HOM05D004210 ORTHO05D005017 1.1e-45 186.8 91 94.5
FvH4_2g10510 Fragaria vesca HOM05D004210 ORTHO05D005017 1.1e-45 186.8 91 94.5
FAN20G0431 Fragaria x ananassa HOM05D004210 ORTHO05D005017 1.1e-45 186.8 91 94.5
FAN24G2713 Fragaria x ananassa HOM05D004210 ORTHO05D005017 1.1e-45 186.8 91 94.5
MD02G1259400 Malus domestica HOM05D004210 ORTHO05D005017 1.1e-45 186.8 91 94.5
MD07G1061200 Malus domestica HOM05D004210 ORTHO05D005017 1.1e-45 186.8 91 94.5
Phvul.008G161500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.1e-45 186.8 91 94.5
RcHm_v2.0_Chr6g0268021 Rosa chinensis HOM05D004210 ORTHO05D005017 1.1e-45 186.8 91 94.5
Aa31LG8G7780 Aethionema arabicum HOM05D004210 ORTHO05D005017 1.4e-45 186.4 91 94.5
BcaB04g20615 Brassica carinata HOM05D004210 ORTHO05D005017 1.4e-45 186.4 91 94.5
A01p33790 Brassica napus HOM05D004210 ORTHO05D005017 1.4e-45 186.4 91 94.5
C01p43210 Brassica napus HOM05D004210 ORTHO05D005017 1.4e-45 186.4 91 94.5
BraA01t03490Z Brassica rapa HOM05D004210 ORTHO05D005017 1.4e-45 186.4 91 94.5
Carub.0003s2096 Capsella rubella HOM05D004210 ORTHO05D005017 1.4e-45 186.4 91 95.6
Hma1.2p1_0892F.1_g233380 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 1.4e-45 186.4 91 95.6
Lj3g0025560 Lotus japonicus HOM05D004210 ORTHO05D005017 1.4e-45 186.4 91 93.4
QL04p049870 Quercus lobata HOM05D004210 ORTHO05D005017 1.4e-45 186.4 91 94.5
Sp3g19020 Schrenkiella parvula HOM05D004210 ORTHO05D005017 1.4e-45 186.4 91 94.5
Migut.B01123 Erythranthe guttata HOM05D004210 ORTHO05D005017 1.8e-45 186.0 91 93.4
Thhalv10020461m.g Eutrema salsugineum HOM05D004210 ORTHO05D005017 1.8e-45 186.0 91 94.5
Lsat_1_v5_gn_4_138820 Lactuca sativa HOM05D004210 ORTHO05D005017 1.8e-45 186.0 91 93.4
Nitab4.5_0001611g0030 Nicotiana tabacum HOM05D004210 ORTHO05D005017 1.8e-45 186.0 91 93.4
Nitab4.5_0004014g0070 Nicotiana tabacum HOM05D004210 ORTHO05D005017 1.8e-45 186.0 91 93.4
Peaxi162Scf00647g00139 Petunia axillaris HOM05D004210 ORTHO05D005017 1.8e-45 186.0 91 92.3
Potri.019G000900 Populus trichocarpa HOM05D004210 ORTHO05D005017 2.4e-45 185.7 91 94.5
Eucgr.G02654 Eucalyptus grandis HOM05D004210 ORTHO05D005017 3.1e-45 185.3 91 93.4
FAN15G0031 Fragaria x ananassa HOM05D004210 ORTHO05D005017 3.1e-45 185.3 91 93.4
Sc18g0006930 Simmondsia chinensis HOM05D004210 ORTHO05D005017 3.1e-45 185.3 91 93.4
BcaC09g49045 Brassica carinata HOM05D004210 ORTHO05D005017 4.0e-45 184.9 91 93.4
CARHR096890 Cardamine hirsuta HOM05D004210 ORTHO05D005017 4.0e-45 184.9 91 94.5
VMungo0647G0038 Vigna mungo HOM05D004210 ORTHO05D005017 4.0e-45 184.9 91 93.4
Sabra19G0005800 Salix brachista HOM05D004210 ORTHO05D005017 5.2e-45 184.5 91 93.4
Sabra19G0006000 Salix brachista HOM05D004210 ORTHO05D005017 5.2e-45 184.5 91 93.4
Sabra19G0013500 Salix brachista HOM05D004210 ORTHO05D005017 5.2e-45 184.5 91 93.4
Sabra19G0014200 Salix brachista HOM05D004210 ORTHO05D005017 5.2e-45 184.5 91 93.4
MELO3C012312.2 Cucumis melo HOM05D004210 ORTHO05D005017 6.8e-45 184.1 91 92.3
CsaV3_5G035020 Cucumis sativus L. HOM05D004210 ORTHO05D005017 6.8e-45 184.1 91 92.3
Lj8A287G21 Lonicera japonica HOM05D004210 ORTHO05D005017 6.8e-45 184.1 91 93.4
Rhsim04G0193600 Rhododendron simsii HOM05D004210 ORTHO05D005017 6.8e-45 184.1 91 92.3
SGA_v2.0_scaffold196G40978 Striga asiatica HOM05D004210 ORTHO05D005017 6.8e-45 184.1 91 91.2
THA.LOC104804661 Tarenaya hassleriana HOM05D004210 ORTHO05D005017 6.8e-45 184.1 91 93.4
TPR.G14605 Trifolium pratense HOM05D004210 ORTHO05D005017 6.8e-45 184.1 91 95.6
arahy.Tifrunner.gnm1.ann1.374KBL Arachis hypogaea HOM05D004210 ORTHO05D005017 8.9e-45 183.7 91 94.5
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 8.9e-45 183.7 91 94.5
ClCG05G022120 Citrullus lanatus HOM05D004210 ORTHO05D005017 8.9e-45 183.7 91 91.2
PGR142G1915 Punica granatum HOM05D004210 ORTHO05D005017 8.9e-45 183.7 91 93.4
Hund06390 Selenicereus undatus HOM05D004210 ORTHO05D005017 8.9e-45 183.7 91 92.3
Sed0005167 Sechium edule HOM05D004210 ORTHO05D005017 1.2e-44 183.3 91 92.3
AUR62025703 Chenopodium quinoa HOM05D004210 ORTHO05D005017 1.5e-44 183.0 91 92.3
Sabra16G0191800 Salix brachista HOM05D004210 ORTHO05D005017 1.5e-44 183.0 91 93.4
SalBow4G0418 Salvia bowleyana HOM05D004210 ORTHO05D005017 1.5e-44 183.0 91 92.3
Sed0024731 Sechium edule HOM05D004210 ORTHO05D005017 1.5e-44 183.0 91 91.2
AUR62001320 Chenopodium quinoa HOM05D004210 ORTHO05D005017 2.0e-44 182.6 91 92.3
Ca_13103_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 2.0e-44 182.6 91 93.4
Ca_24139_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 2.0e-44 182.6 91 93.4
Gohir.D13G003400 Gossypium hirsutum HOM05D004210 ORTHO05D005017 2.0e-44 182.6 91 94.5
Gorai.013G003300 Gossypium raimondii HOM05D004210 ORTHO05D005017 2.0e-44 182.6 91 94.5
Psat4g180480 Pisum sativum HOM05D004210 ORTHO05D005017 2.6e-44 182.2 91 93.4
Duzib106G1791 Durio zibethinus HOM05D004210 ORTHO05D005017 3.4e-44 181.8 91 93.4
Duzib114G0085 Durio zibethinus HOM05D004210 ORTHO05D005017 3.4e-44 181.8 91 93.4
Lalb_Chr01g0007661 Lupinus albus HOM05D004210 ORTHO05D005017 4.4e-44 181.4 91 92.3
Gohir.A13G003500 Gossypium hirsutum HOM05D004210 ORTHO05D005017 5.8e-44 181.0 91 93.4
HanXRQChr09g0259631 Helianthus annuus HOM05D004210 ORTHO05D005017 5.8e-44 181.0 92 92.4
Medtr8g041740 Medicago truncatula HOM05D004210 ORTHO05D005017 5.8e-44 181.0 91 92.3
TAR381G0930 Trochodendron aralioides HOM05D004210 ORTHO05D005017 5.8e-44 181.0 91 89.0
arahy.Tifrunner.gnm1.ann1.A6SQAT Arachis hypogaea HOM05D004210 ORTHO05D005017 7.6e-44 180.6 91 92.3
Glyma.08G229800 Glycine max HOM05D004210 ORTHO05D005017 7.6e-44 180.6 91 91.2
Solyc01g096950.4 Solanum lycopersicum HOM05D004210 ORTHO05D005017 7.6e-44 180.6 91 89.0
Sopen01g040660 Solanum pennellii HOM05D004210 ORTHO05D005017 7.6e-44 180.6 91 89.0
PGSC0003DMG400027522 Solanum tuberosum HOM05D004210 ORTHO05D005017 7.6e-44 180.6 91 89.0
MSTRG.20468 Avicennia marina HOM05D004210 ORTHO05D005017 9.9e-44 180.3 91 91.2
Nn5g30473 Nelumbo nucifera HOM05D004210 ORTHO05D005017 9.9e-44 180.3 91 91.2
Medtr8g045440 Medicago truncatula HOM05D004210 ORTHO05D005017 1.3e-43 179.9 91 91.2
TAR376G0596 Trochodendron aralioides HOM05D004210 ORTHO05D005017 2.2e-43 179.1 91 89.0
DCAR_002139 Daucus carota HOM05D004210 ORTHO05D005017 2.9e-43 178.7 91 91.2
Thecc.10G122400 Theobroma cacao HOM05D004210 ORTHO05D005017 2.9e-43 178.7 91 91.2
Phvul.003G276000 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 3.8e-43 178.3 91 91.2
TAR625G1450 Trochodendron aralioides HOM05D004210 ORTHO05D005017 3.8e-43 178.3 90 90.0
VMungo0251G3202 Vigna mungo HOM05D004210 ORTHO05D005017 3.8e-43 178.3 91 91.2
COL.COLO4_16323 Corchorus olitorius HOM05D004210 ORTHO05D005017 4.9e-43 177.9 91 90.1
Lalb_Chr03g0032281 Lupinus albus HOM05D004210 ORTHO05D005017 6.4e-43 177.6 91 91.2
Ca_05576_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 8.4e-43 177.2 91 91.2
Ca_24147_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 8.4e-43 177.2 91 92.3
PSO541G0139 Papaver somniferum HOM05D004210 ORTHO05D005017 8.4e-43 177.2 91 89.0
Psat4g200760 Pisum sativum HOM05D004210 ORTHO05D005017 1.9e-42 176.0 91 90.1
Aqoxy1G00569 Aquilegia oxysepala HOM05D004210 ORTHO05D005017 2.4e-42 175.6 91 86.8
HPP92_001742 Vanilla planifolia HOM05D004210 ORTHO05D005017 3.2e-42 175.3 91 86.8
unitig_26.g9497 Utricularia gibba HOM05D004210 ORTHO05D005017 5.4e-42 174.5 92 88.0
CSS0018495 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 7.1e-42 174.1 91 86.8
CDE07G1685 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 7.1e-42 174.1 91 89.0
PSO478G0462 Papaver somniferum HOM05D004210 ORTHO05D005017 7.1e-42 174.1 91 87.9
TPR.G24022 Trifolium pratense HOM05D004210 ORTHO05D005017 7.1e-42 174.1 91 90.1
Lalb_Chr18g0049111 Lupinus albus HOM05D004210 ORTHO05D005017 1.2e-41 173.3 90 87.8
CDE04G1921 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 2.7e-41 172.2 91 86.8
Medtr8g045463 Medicago truncatula HOM05D004210 ORTHO05D005017 7.8e-41 170.6 91 85.7
Medtr8g045470 Medicago truncatula HOM05D004210 ORTHO05D005017 7.8e-41 170.6 91 85.7
ATR0661G188 Amborella trichopoda HOM05D004210 ORTHO05D005017 1.5e-39 166.4 91 82.4
HanXRQChr14g0446551 Helianthus annuus HOM05D004210 ORTHO05D005017 2.5e-39 165.6 91 80.2
MBI16_g14436_MAGBIO Magnolia biondii HOM05D004210 ORTHO05D005017 2.1e-38 162.5 113 69.9
ECA238G3001 Erigeron canadensis HOM05D004210 ORTHO05D005017 2.6e-36 155.6 90 75.6
Os03g0207900 Oryza sativa ssp. japonica HOM05D004210 ORTHO05D005017 2.6e-36 155.6 90 77.8
Zm00001eb007220 Zea mays HOM05D004210 ORTHO05D005017 4.4e-36 154.8 91 74.7
SEGI_15684 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 5.8e-36 154.5 91 78.0
CSS0025743 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 3.8e-35 151.8 89 80.9
Mapoly0028s0049 Marchantia polymorpha HOM05D004210 ORTHO05D005017 8.4e-35 150.6 92 76.1
Pp3c12_14420 Physcomitrium patens HOM05D004210 ORTHO05D005017 5.4e-34 147.9 92 75.0
Psat2g059840 Pisum sativum HOM05D004210 ORTHO05D005017 1.6e-33 146.4 94 68.1
CBR_g10843 Chara braunii HOM05D004210 ORTHO05D005017 1.3e-32 143.3 104 65.4
AagrBONN_evm.TU.Sc2ySwM_344.4521 Anthoceros agrestis HOM05D004210 ORTHO05D005017 8.7e-32 140.6 91 72.5
AagrBONN_evm.TU.Sc2ySwM_368.940 Anthoceros agrestis HOM05D004210 ORTHO05D005017 1.5e-31 139.8 91 67.0
SMO145G0186 Selaginella moellendorffii HOM05D004210 ORTHO05D005017 2.5e-31 139.0 105 61.9
Dinv18720 Davidia involucrata HOM05D004210 ORTHO05D005017 3.3e-31 138.7 70 94.3
TWI75G1118 Tripterygium wilfordii HOM05D004210 ORTHO05D005017 1.5e-28 129.8 91 67.0
Cre03.g195750 Chlamydomonas reinhardtii HOM05D004210 ORTHO05D005017 6.0e-25 117.9 95 56.8
Phvul.011G184500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.0e-24 117.1 91 61.5
CBR_g18561 Chara braunii HOM05D004210 ORTHO05D005017 3.0e-24 115.5 91 61.5
Rhsim01G0121500 Rhododendron simsii HOM05D004210 ORTHO05D005017 8.7e-24 114.0 58 91.4
PRCOL_00000885 Prasinoderma coloniale HOM05D004210 ORTHO05D005017 4.3e-23 111.7 92 56.5
Pp3c4_7580 Physcomitrium patens HOM05D004210 ORTHO05D005017 2.5e-18 95.9 72 56.9
Cfa023087 Carpinus fangiana HOM05D004210 ORTHO05D005017 1.6e-14 83.2 80 50.0
Dinv18710 Davidia involucrata HOM05D004210 ORTHO05D005017 1.1e-13 80.5 91 51.6
MCO03G571 Micromonas commoda HOM05D004210 ORTHO05D005017 2.5e-10 69.3 93 39.8


User provided reference genes

Program Settings