Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.1162 Acer truncatum HOM05D004210 ORTHO05D005017 5.1e-76 287.7 152 100.0
Atru.chr10.436 Acer truncatum HOM05D004210 ORTHO05D005017 2.8e-66 255.4 149 90.6
Sabra19G0014200 Salix brachista HOM05D004210 ORTHO05D005017 2.8e-58 228.8 147 80.3
Potri.019G000900 Populus trichocarpa HOM05D004210 ORTHO05D005017 4.8e-58 228.0 147 79.6
Sabra19G0005800 Salix brachista HOM05D004210 ORTHO05D005017 8.2e-58 227.3 147 79.6
Sabra19G0013500 Salix brachista HOM05D004210 ORTHO05D005017 1.1e-57 226.9 147 79.6
Thecc.10G122400 Theobroma cacao HOM05D004210 ORTHO05D005017 9.0e-57 223.8 151 80.1
Sabra19G0006000 Salix brachista HOM05D004210 ORTHO05D005017 1.2e-56 223.4 147 78.2
Duzib114G0085 Durio zibethinus HOM05D004210 ORTHO05D005017 4.5e-56 221.5 151 79.5
Ciclev10014800m.g Citrus clementina HOM05D004210 ORTHO05D005017 2.9e-55 218.8 136 84.6
COL.COLO4_16323 Corchorus olitorius HOM05D004210 ORTHO05D005017 2.5e-54 215.7 151 78.8
Potri.001G305500 Populus trichocarpa HOM05D004210 ORTHO05D005017 2.7e-53 212.2 147 76.2
Cpa.g.sc138.49 Carica papaya HOM05D004210 ORTHO05D005017 2.6e-51 205.7 150 74.7
Duzib106G1791 Durio zibethinus HOM05D004210 ORTHO05D005017 7.4e-51 204.1 151 74.2
Dinv04121 Davidia involucrata HOM05D004210 ORTHO05D005017 3.7e-50 201.8 155 72.3
GSVIVG01018295001 Vitis vinifera HOM05D004210 ORTHO05D005017 1.8e-49 199.5 152 69.7
ClCG05G022120 Citrullus lanatus HOM05D004210 ORTHO05D005017 2.4e-49 199.1 155 71.0
Manes.13G077544 Manihot esculenta HOM05D004210 ORTHO05D005017 2.4e-49 199.1 153 75.2
MELO3C012312.2 Cucumis melo HOM05D004210 ORTHO05D005017 4.1e-49 198.4 155 70.3
CsaV3_5G035020 Cucumis sativus L. HOM05D004210 ORTHO05D005017 1.2e-48 196.8 155 70.3
Eucgr.G02654 Eucalyptus grandis HOM05D004210 ORTHO05D005017 1.5e-48 196.4 161 70.2
CiPaw.14G037100 Carya illinoinensis HOM05D004210 ORTHO05D005017 3.4e-48 195.3 149 73.2
Manes.13G078700 Manihot esculenta HOM05D004210 ORTHO05D005017 4.5e-48 194.9 153 73.2
Sabra16G0191800 Salix brachista HOM05D004210 ORTHO05D005017 1.1e-46 190.3 150 72.0
Dinv30359 Davidia involucrata HOM05D004210 ORTHO05D005017 1.4e-46 189.9 160 66.9
Gohir.A13G003500 Gossypium hirsutum HOM05D004210 ORTHO05D005017 4.2e-46 188.3 156 69.2
VMungo0251G3202 Vigna mungo HOM05D004210 ORTHO05D005017 2.7e-45 185.7 150 70.0
Dinv18710 Davidia involucrata HOM05D004210 ORTHO05D005017 3.6e-45 185.3 160 65.0
Phvul.003G276000 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 6.1e-45 184.5 150 69.3
Glyma.08G229800 Glycine max HOM05D004210 ORTHO05D005017 7.9e-45 184.1 148 69.6
Sed0024731 Sechium edule HOM05D004210 ORTHO05D005017 1.0e-44 183.7 155 69.0
Hma1.2p1_0892F.1_g233380 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 2.3e-44 182.6 159 67.9
arahy.Tifrunner.gnm1.ann1.A6SQAT Arachis hypogaea HOM05D004210 ORTHO05D005017 3.9e-44 181.8 150 70.0
CSS0018495 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 6.7e-44 181.0 157 67.5
arahy.Tifrunner.gnm1.ann1.374KBL Arachis hypogaea HOM05D004210 ORTHO05D005017 1.1e-43 180.3 150 69.3
Gohir.D13G003400 Gossypium hirsutum HOM05D004210 ORTHO05D005017 1.5e-43 179.9 155 67.7
Gorai.013G003300 Gossypium raimondii HOM05D004210 ORTHO05D005017 1.5e-43 179.9 155 67.7
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 3.3e-43 178.7 150 69.3
Glyma.13G124200 Glycine max HOM05D004210 ORTHO05D005017 3.3e-43 178.7 150 69.3
TPR.G24022 Trifolium pratense HOM05D004210 ORTHO05D005017 5.7e-43 177.9 152 67.1
Actinidia18370 Actinidia chinensis HOM05D004210 ORTHO05D005017 1.3e-42 176.8 138 72.5
Ca_13103_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 2.2e-42 176.0 150 67.3
Haze_03415 Corylus avellana HOM05D004210 ORTHO05D005017 2.2e-42 176.0 148 68.2
PGR142G1915 Punica granatum HOM05D004210 ORTHO05D005017 2.8e-42 175.6 159 67.3
TPR.G14605 Trifolium pratense HOM05D004210 ORTHO05D005017 1.1e-41 173.7 150 66.7
Sed0005167 Sechium edule HOM05D004210 ORTHO05D005017 1.8e-41 172.9 155 67.1
Ca_24139_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 2.4e-41 172.6 150 66.7
Psat4g180480 Pisum sativum HOM05D004210 ORTHO05D005017 2.4e-41 172.6 148 65.5
Lj3g0025560 Lotus japonicus HOM05D004210 ORTHO05D005017 3.1e-41 172.2 150 66.0
TAR376G0596 Trochodendron aralioides HOM05D004210 ORTHO05D005017 3.1e-41 172.2 159 63.5
Phvul.008G161500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 7.0e-41 171.0 150 68.0
Glyma.06G315900 Glycine max HOM05D004210 ORTHO05D005017 1.6e-40 169.9 136 72.1
TAR625G1450 Trochodendron aralioides HOM05D004210 ORTHO05D005017 5.9e-40 167.9 156 64.1
Medtr8g041740 Medicago truncatula HOM05D004210 ORTHO05D005017 1.3e-39 166.8 150 63.3
Nn5g30473 Nelumbo nucifera HOM05D004210 ORTHO05D005017 1.3e-39 166.8 160 60.6
Aqoxy1G00569 Aquilegia oxysepala HOM05D004210 ORTHO05D005017 3.8e-39 165.2 159 61.6
Lj8A287G21 Lonicera japonica HOM05D004210 ORTHO05D005017 1.1e-38 163.7 160 62.5
Prupe.5G058900 Prunus persica HOM05D004210 ORTHO05D005017 2.5e-38 162.5 111 76.6
Psat4g200760 Pisum sativum HOM05D004210 ORTHO05D005017 9.4e-38 160.6 150 62.7
VMungo0647G0038 Vigna mungo HOM05D004210 ORTHO05D005017 1.6e-37 159.8 150 65.3
RcHm_v2.0_Chr6g0268021 Rosa chinensis HOM05D004210 ORTHO05D005017 6.1e-37 157.9 110 75.5
CANSAT56G1750 Cannabis sativa HOM05D004210 ORTHO05D005017 8.0e-37 157.5 113 74.3
FvH4_2g10510 Fragaria vesca HOM05D004210 ORTHO05D005017 1.8e-36 156.4 110 74.5
FAN15G0031 Fragaria x ananassa HOM05D004210 ORTHO05D005017 1.8e-36 156.4 110 74.5
FAN24G2713 Fragaria x ananassa HOM05D004210 ORTHO05D005017 1.8e-36 156.4 110 74.5
FAN27G0821 Fragaria x ananassa HOM05D004210 ORTHO05D005017 1.8e-36 156.4 111 73.9
Medtr8g045440 Medicago truncatula HOM05D004210 ORTHO05D005017 1.8e-36 156.4 150 62.0
FAN20G0431 Fragaria x ananassa HOM05D004210 ORTHO05D005017 4.0e-36 155.2 110 73.6
Lalb_Chr01g0007661 Lupinus albus HOM05D004210 ORTHO05D005017 8.8e-36 154.1 150 62.0
Hund00055 Selenicereus undatus HOM05D004210 ORTHO05D005017 1.5e-35 153.3 159 56.6
Cc08_g06030 Coffea canephora HOM05D004210 ORTHO05D005017 2.6e-35 152.5 141 64.5
Glyma.05G087400 Glycine max HOM05D004210 ORTHO05D005017 5.7e-35 151.4 136 65.4
Rhsim04G0193600 Rhododendron simsii HOM05D004210 ORTHO05D005017 7.5e-35 151.0 114 71.1
EL10Ac7g18124 Beta vulgaris HOM05D004210 ORTHO05D005017 1.3e-34 150.2 157 56.7
PGSC0003DMG400027522 Solanum tuberosum HOM05D004210 ORTHO05D005017 1.3e-34 150.2 127 69.3
THA.LOC104804661 Tarenaya hassleriana HOM05D004210 ORTHO05D005017 1.7e-34 149.8 147 56.5
Lalb_Chr18g0049111 Lupinus albus HOM05D004210 ORTHO05D005017 3.7e-34 148.7 136 62.5
Sc18g0006930 Simmondsia chinensis HOM05D004210 ORTHO05D005017 3.7e-34 148.7 149 59.7
Sopen01g040660 Solanum pennellii HOM05D004210 ORTHO05D005017 8.2e-34 147.5 125 69.6
Nitab4.5_0004014g0070 Nicotiana tabacum HOM05D004210 ORTHO05D005017 1.1e-33 147.1 138 63.0
Peaxi162Scf00647g00139 Petunia axillaris HOM05D004210 ORTHO05D005017 1.4e-33 146.7 125 68.0
Lalb_Chr03g0032281 Lupinus albus HOM05D004210 ORTHO05D005017 1.8e-33 146.4 122 69.7
Nitab4.5_0001611g0030 Nicotiana tabacum HOM05D004210 ORTHO05D005017 1.8e-33 146.4 135 63.7
Aa31LG8G7780 Aethionema arabicum HOM05D004210 ORTHO05D005017 5.3e-33 144.8 148 57.4
Ca_05576_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 7.0e-33 144.4 155 59.4
AUR62025703 Chenopodium quinoa HOM05D004210 ORTHO05D005017 7.7e-32 141.0 160 53.8
Solyc01g096950.4 Solanum lycopersicum HOM05D004210 ORTHO05D005017 1.0e-31 140.6 125 68.0
PSO541G0139 Papaver somniferum HOM05D004210 ORTHO05D005017 2.2e-31 139.4 158 57.6
vmacro20845 Vaccinium macrocarpon HOM05D004210 ORTHO05D005017 5.0e-31 138.3 114 65.8
Sp3g19020 Schrenkiella parvula HOM05D004210 ORTHO05D005017 1.1e-30 137.1 144 56.9
Hund06390 Selenicereus undatus HOM05D004210 ORTHO05D005017 1.1e-30 137.1 130 61.5
Thhalv10020461m.g Eutrema salsugineum HOM05D004210 ORTHO05D005017 1.5e-30 136.7 144 57.6
Carub.0003s2096 Capsella rubella HOM05D004210 ORTHO05D005017 1.9e-30 136.3 148 56.8
Dinv18720 Davidia involucrata HOM05D004210 ORTHO05D005017 5.5e-30 134.8 98 72.4
AT3G21060 Arabidopsis thaliana HOM05D004210 ORTHO05D005017 1.6e-29 133.3 144 56.9
Medtr8g045463 Medicago truncatula HOM05D004210 ORTHO05D005017 1.6e-29 133.3 149 53.0
Medtr8g045470 Medicago truncatula HOM05D004210 ORTHO05D005017 1.6e-29 133.3 149 53.0
AUR62001320 Chenopodium quinoa HOM05D004210 ORTHO05D005017 2.1e-29 132.9 159 52.8
AL3G35010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 2.7e-29 132.5 143 57.3
MSTRG.20468 Avicennia marina HOM05D004210 ORTHO05D005017 2.7e-29 132.5 105 67.6
PSO478G0462 Papaver somniferum HOM05D004210 ORTHO05D005017 3.6e-29 132.1 158 55.7
HPP92_001742 Vanilla planifolia HOM05D004210 ORTHO05D005017 3.6e-29 132.1 160 55.6
CDE04G1921 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 6.1e-29 131.3 158 53.2
Lsat_1_v5_gn_4_138820 Lactuca sativa HOM05D004210 ORTHO05D005017 8.0e-29 131.0 160 55.0
ATR0661G188 Amborella trichopoda HOM05D004210 ORTHO05D005017 3.0e-28 129.0 170 50.0
MD07G1061200 Malus domestica HOM05D004210 ORTHO05D005017 4.0e-28 128.6 98 71.4
CDE07G1685 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 6.8e-28 127.9 158 52.5
SalBow4G0418 Salvia bowleyana HOM05D004210 ORTHO05D005017 1.5e-27 126.7 121 57.0
BcaC09g49045 Brassica carinata HOM05D004210 ORTHO05D005017 4.4e-27 125.2 149 55.0
C01p43210 Brassica napus HOM05D004210 ORTHO05D005017 4.4e-27 125.2 149 55.0
BolC1t04267H Brassica oleracea HOM05D004210 ORTHO05D005017 4.4e-27 125.2 149 55.0
MD02G1259400 Malus domestica HOM05D004210 ORTHO05D005017 1.7e-26 123.2 98 69.4
QL04p049870 Quercus lobata HOM05D004210 ORTHO05D005017 2.2e-26 122.9 148 54.1
DCAR_002139 Daucus carota HOM05D004210 ORTHO05D005017 6.3e-26 121.3 143 53.1
Migut.B01123 Erythranthe guttata HOM05D004210 ORTHO05D005017 4.1e-25 118.6 117 59.0
A01p33790 Brassica napus HOM05D004210 ORTHO05D005017 5.4e-25 118.2 142 54.2
BraA01t03490Z Brassica rapa HOM05D004210 ORTHO05D005017 5.4e-25 118.2 142 54.2
Glyma.04G129500 Glycine max HOM05D004210 ORTHO05D005017 7.7e-24 114.4 139 53.2
ECA248G0690 Erigeron canadensis HOM05D004210 ORTHO05D005017 2.9e-23 112.5 120 55.8
CARHR096890 Cardamine hirsuta HOM05D004210 ORTHO05D005017 3.8e-23 112.1 147 49.7
Ca_24147_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 3.8e-23 112.1 88 70.5
TWI75G1118 Tripterygium wilfordii HOM05D004210 ORTHO05D005017 1.5e-22 110.2 124 54.0
BcaB04g20615 Brassica carinata HOM05D004210 ORTHO05D005017 4.2e-22 108.6 148 49.3
Oeu012473.1 Olea europaea HOM05D004210 ORTHO05D005017 5.5e-22 108.2 111 58.6
Psat2g059840 Pisum sativum HOM05D004210 ORTHO05D005017 1.8e-20 103.2 135 51.1
TAR381G0930 Trochodendron aralioides HOM05D004210 ORTHO05D005017 2.3e-20 102.8 68 77.9
unitig_26.g9497 Utricularia gibba HOM05D004210 ORTHO05D005017 4.0e-20 102.1 108 58.3
CSS0025743 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 4.4e-19 98.6 76 71.1
Oeu027040.1 Olea europaea HOM05D004210 ORTHO05D005017 6.3e-18 94.7 87 60.9
HanXRQChr09g0259631 Helianthus annuus HOM05D004210 ORTHO05D005017 1.6e-16 90.1 149 50.3
Os03g0207900 Oryza sativa ssp. japonica HOM05D004210 ORTHO05D005017 2.7e-16 89.4 146 48.6
Zm00001eb007220 Zea mays HOM05D004210 ORTHO05D005017 6.6e-15 84.7 154 40.9
HanXRQChr14g0446551 Helianthus annuus HOM05D004210 ORTHO05D005017 2.8e-13 79.3 82 53.7
Rhsim01G0121500 Rhododendron simsii HOM05D004210 ORTHO05D005017 6.4e-10 68.2 46 76.1
SGA_v2.0_scaffold196G40978 Striga asiatica HOM05D004210 ORTHO05D005017 2.4e-09 66.2 80 48.8
Nn1g04650 Nelumbo nucifera HOM05D004210 ORTHO05D005017 2.0e-08 63.2 66 59.1
SEGI_15684 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 2.7e-08 62.8 168 36.9
Mapoly0028s0049 Marchantia polymorpha HOM05D004210 ORTHO05D005017 5.9e-08 61.6 145 40.0
Medtr3g040320 Medicago truncatula HOM05D004210 ORTHO05D005017 1.5e-06 57.0 57 52.6
Phvul.011G184500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.9e-06 56.6 103 42.7


User provided reference genes

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