Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.1068 Acer truncatum HOM05D000214 ORTHO05D000131 5.3e-30 133.7 65 100.0
Atru.chr12.1070 Acer truncatum HOM05D000214 ORTHO05D000131 9.0e-22 106.3 60 86.7
Atru.chr1.504 Acer truncatum HOM05D000214 ORTHO05D000131 8.4e-20 99.8 60 80.0
Atru.chr11.447 Acer truncatum HOM05D000214 ORTHO05D000131 1.6e-15 85.5 62 64.5
Atru.chr10.189 Acer truncatum HOM05D000214 ORTHO05D000131 3.7e-15 84.3 55 72.7
Atru.chr6.861 Acer truncatum HOM05D000214 ORTHO05D000131 3.7e-15 84.3 62 64.5
Atru.chr13.1769 Acer truncatum HOM05D000214 ORTHO05D000131 6.3e-15 83.6 60 63.3
Atru.chr13.1768 Acer truncatum HOM05D000214 ORTHO05D000131 8.2e-15 83.2 62 64.5
Atru.chr4.1137 Acer truncatum HOM05D000214 ORTHO05D000131 1.1e-14 82.8 60 68.3
Atru.chr11.100 Acer truncatum HOM05D000214 ORTHO05D000131 2.4e-14 81.6 62 62.9
Atru.chr8.365 Acer truncatum HOM05D000214 ORTHO05D000131 3.1e-14 81.3 55 67.3
Atru.chr5.2879 Acer truncatum HOM05D000214 ORTHO05D000131 5.3e-14 80.5 55 69.1
Atru.chr11.1167 Acer truncatum HOM05D000214 ORTHO05D000131 9.0e-14 79.7 62 61.3
Oeu033031.1 Olea europaea HOM05D000214 ORTHO05D000131 1.2e-13 79.3 60 63.3
Atru.chr12.1927 Acer truncatum HOM05D000214 ORTHO05D000131 2.0e-13 78.6 53 67.9
Atru.chr12.1935 Acer truncatum HOM05D000214 ORTHO05D000131 2.0e-13 78.6 53 67.9
CANSAT64G0191 Cannabis sativa HOM05D000214 ORTHO05D000131 2.0e-13 78.6 60 61.7
CANSAT78G2008 Cannabis sativa HOM05D000214 ORTHO05D000131 2.0e-13 78.6 60 61.7
Atru.chr3.1638 Acer truncatum HOM05D000214 ORTHO05D000131 3.4e-13 77.8 62 59.7
Atru.chr4.226 Acer truncatum HOM05D000214 ORTHO05D000131 3.4e-13 77.8 60 61.7
COL.COLO4_35650 Corchorus olitorius HOM05D000214 ORTHO05D000131 3.4e-13 77.8 60 63.3
Oeu011660.1 Olea europaea HOM05D000214 ORTHO05D000131 3.4e-13 77.8 60 63.3
Atru.chr4.404 Acer truncatum HOM05D000214 ORTHO05D000131 5.9e-13 77.0 59 61.0
COL.COLO4_33403 Corchorus olitorius HOM05D000214 ORTHO05D000131 5.9e-13 77.0 60 60.0
Atru.chr4.1207 Acer truncatum HOM05D000214 ORTHO05D000131 1.7e-12 75.5 50 74.0
CANSAT01G2145 Cannabis sativa HOM05D000214 ORTHO05D000131 2.2e-12 75.1 60 58.3
COL.COLO4_32186 Corchorus olitorius HOM05D000214 ORTHO05D000131 2.2e-12 75.1 60 58.3
Atru.chr8.1336 Acer truncatum HOM05D000214 ORTHO05D000131 2.9e-12 74.7 38 92.1
Ciclev10017509m.g Citrus clementina HOM05D000214 ORTHO05D000131 3.8e-12 74.3 55 65.5
Oeu064191.1 Olea europaea HOM05D000214 ORTHO05D000131 1.1e-11 72.8 60 61.7
RcHm_v2.0_Chr4g0404131 Rosa chinensis HOM05D000214 ORTHO05D000131 1.1e-11 72.8 60 61.7
AT3G22935 Arabidopsis thaliana HOM05D000214 ORTHO05D000131 1.4e-11 72.4 60 56.7
CANSAT35G1106 Cannabis sativa HOM05D000214 ORTHO05D000131 9.3e-11 69.7 50 64.0
Atru.chr4.831 Acer truncatum HOM05D000214 ORTHO05D000131 2.1e-10 68.6 50 62.0
AL8G16310 Arabidopsis lyrata HOM05D000214 ORTHO05D000131 2.7e-10 68.2 56 60.7
CARHR258710 Cardamine hirsuta HOM05D000214 ORTHO05D000131 3.0e-09 64.7 60 50.0
CANSAT25G1277 Cannabis sativa HOM05D000214 ORTHO05D000131 3.9e-09 64.3 47 66.0
FAN28G0005 Fragaria x ananassa HOM05D000214 ORTHO05D000131 8.7e-09 63.2 60 53.3
CANSAT64G1031 Cannabis sativa HOM05D000214 ORTHO05D000131 3.3e-08 61.2 54 53.7
PGSC0003DMG400020281 Solanum tuberosum HOM05D000214 ORTHO05D000131 5.7e-08 60.5 57 50.9
Atru.chr4.772 Acer truncatum HOM05D000214 ORTHO05D000131 7.4e-08 60.1 42 69.0
CARHR106520 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.3e-07 59.3 57 50.9
CSS0009917 Camellia sinensis var. sinensis HOM05D000214 ORTHO05D000131 1.6e-07 58.9 61 52.5
Atru.chr10.1039 Acer truncatum HOM05D000214 ORTHO05D000131 2.2e-07 58.5 47 55.3
AT2G13770 Arabidopsis thaliana HOM05D000214 ORTHO05D000131 6.3e-07 57.0 44 59.1
CARHR055700 Cardamine hirsuta HOM05D000214 ORTHO05D000131 8.2e-07 56.6 44 59.1
Atru.chr1.2587 Acer truncatum HOM05D000214 ORTHO05D000131 1.8e-06 55.5 35 74.3
Oeu040344.1 Olea europaea HOM05D000214 ORTHO05D000131 1.8e-06 55.5 57 50.9
BolC4t23890H Brassica oleracea HOM05D000214 ORTHO05D000131 9.0e-06 53.1 57 45.6


User provided reference genes

Program Settings