Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 6.2e-188 660.6 324 100.0
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 1.7e-121 439.9 334 65.6
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 2.5e-120 436.0 333 66.4
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 1.0e-118 430.6 329 66.6
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 4.4e-117 425.2 327 66.7
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 2.2e-116 422.9 328 64.0
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 3.7e-116 422.2 336 62.2
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 5.9e-114 414.8 343 62.1
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 2.9e-113 412.5 347 60.8
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 1.5e-112 410.2 327 63.0
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 1.2e-111 407.1 330 62.7
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 2.1e-111 406.4 323 63.8
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 2.7e-111 406.0 324 64.2
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 6.1e-111 404.8 330 62.7
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 1.8e-110 403.3 330 62.1
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 2.3e-110 402.9 327 63.9
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 4.0e-110 402.1 301 68.1
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 4.4e-109 398.7 338 61.8
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 7.5e-109 397.9 334 62.0
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 1.1e-107 394.0 324 61.1
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 1.8e-107 393.3 325 61.8
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 3.1e-107 392.5 332 61.1
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 9.1e-107 391.0 324 60.5
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 1.7e-105 386.7 325 61.2
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 2.9e-105 386.0 323 58.5
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 3.8e-105 385.6 323 58.5
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 5.0e-105 385.2 332 61.1
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 5.0e-105 385.2 319 60.5
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 5.0e-105 385.2 323 58.2
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 1.1e-104 384.0 311 60.5
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 1.1e-104 384.0 323 60.1
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 1.5e-104 383.6 324 59.6
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 3.2e-104 382.5 323 59.1
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 3.2e-104 382.5 364 56.3
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 7.2e-104 381.3 330 60.3
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 2.7e-103 379.4 342 58.8
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 4.7e-103 378.6 341 58.7
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 8.0e-103 377.9 333 58.9
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 1.0e-102 377.5 323 58.2
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 1.0e-102 377.5 333 57.7
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 1.0e-102 377.5 324 61.4
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 4.0e-102 375.6 342 57.9
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 6.8e-102 374.8 331 58.9
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 1.5e-101 373.6 333 58.3
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 1.5e-101 373.6 334 59.6
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 9.8e-101 370.9 328 57.6
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 2.2e-100 369.8 331 58.6
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 2.4e-99 366.3 351 55.6
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 3.1e-99 365.9 263 68.8
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 4.1e-99 365.5 325 58.2
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 7.0e-99 364.8 334 58.1
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 2.7e-98 362.8 329 57.8
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 1.0e-97 360.9 318 56.3
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 1.7e-97 360.1 350 54.3
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 2.3e-97 359.8 347 54.8
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 2.9e-97 359.4 329 56.8
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 1.1e-96 357.5 354 52.5
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 1.9e-96 356.7 293 59.7
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 3.3e-96 355.9 348 54.3
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 1.2e-95 354.0 321 56.4
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 1.0e-94 350.9 354 53.7
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 1.8e-94 350.1 313 55.6
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 3.0e-94 349.4 300 58.7
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 6.8e-94 348.2 312 55.4
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 8.9e-94 347.8 311 54.7
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 1.2e-93 347.4 312 54.5
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 1.5e-93 347.1 323 56.3
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 1.5e-93 347.1 320 56.2
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 4.4e-93 345.5 322 55.6
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 4.4e-93 345.5 322 56.8
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 1.3e-92 344.0 322 56.2
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 1.7e-92 343.6 298 58.1
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 6.3e-92 341.7 344 52.3
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 3.2e-91 339.3 298 57.7
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 3.2e-91 339.3 295 58.0
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 4.1e-91 339.0 309 53.4
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 5.4e-91 338.6 334 56.3
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 5.4e-91 338.6 358 49.2
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 7.0e-91 338.2 333 53.8
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 3.5e-90 335.9 345 51.9
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 5.9e-90 335.1 361 50.7
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 3.9e-89 332.4 322 54.7
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 5.0e-89 332.0 294 57.1
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 6.6e-89 331.6 294 56.5
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 6.6e-89 331.6 350 53.7
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 8.6e-89 331.3 294 56.1
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 1.9e-88 330.1 333 53.2
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 2.5e-88 329.7 257 66.5
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 1.6e-87 327.0 312 52.2
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 6.1e-87 325.1 353 52.4
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 8.0e-87 324.7 310 51.3
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 1.0e-86 324.3 354 48.9
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 4.0e-86 322.4 280 59.3
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 2.6e-85 319.7 339 51.9
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 4.4e-85 318.9 330 49.7
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 7.5e-85 318.2 353 51.0
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 3.2e-83 312.8 345 50.7
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 1.2e-82 310.8 359 49.6
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 2.0e-82 310.1 374 47.3
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 1.1e-70 271.2 280 51.1
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 4.6e-66 255.8 361 43.8
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 3.2e-59 233.0 193 58.0
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 1.6e-50 204.1 327 39.4
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 1.6e-50 204.1 325 39.4
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 1.0e-49 201.4 160 58.1
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 2.3e-49 200.3 330 37.9
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 4.3e-48 196.1 325 38.8
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 2.8e-47 193.4 248 39.1
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 7.1e-43 178.7 203 40.9
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 3.0e-41 173.3 215 46.0
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.9e-40 170.6 208 42.3
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.8e-38 164.1 208 43.3
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 3.1e-38 163.3 204 43.1
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.1e-38 163.3 205 41.5
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 6.9e-38 162.2 211 41.2
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 6.9e-38 162.2 212 39.6
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.0e-37 160.6 216 41.2
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.4e-37 159.8 208 38.9
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 2.7e-34 150.2 213 40.4
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 7.6e-29 132.1 109 60.6
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.8e-28 129.8 146 41.8
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 3.9e-25 119.8 109 58.7
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 1.5e-24 117.9 204 33.8
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 5.3e-22 109.4 114 51.8
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 2.0e-21 107.5 75 66.7
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 4.1e-14 83.2 94 47.9


User provided reference genes

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