Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr12.1030 Acer truncatum HOM05D007410 ORTHO05D009500 6.3e-64 250.0 134 100.0
Atru.BG.129.p Acer truncatum HOM05D007410 ORTHO05D009500 3.5e-22 111.3 86 75.6
QL02p025248 Quercus lobata HOM05D007410 ORTHO05D009500 1.9e-20 105.5 151 46.4
Ciclev10033972m.g Citrus clementina HOM05D007410 ORTHO05D009500 9.5e-20 103.2 131 49.6
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 9.5e-20 103.2 99 60.6
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 1.6e-19 102.4 153 44.4
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 4.7e-19 100.9 155 45.8
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 1.4e-18 99.4 155 45.8
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 1.8e-18 99.0 91 64.8
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 3.0e-18 98.2 91 63.7
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 3.0e-18 98.2 106 59.4
TAR365G0607 Trochodendron aralioides HOM05D007410 ORTHO05D009500 3.0e-18 98.2 95 60.0
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 4.0e-18 97.8 151 43.0
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 6.8e-18 97.1 106 58.5
Duzib093G0520 Durio zibethinus HOM05D007410 ORTHO05D009500 1.2e-17 96.3 93 58.1
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 1.5e-17 95.9 125 51.2
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.5e-17 95.9 125 51.2
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 1.5e-17 95.9 95 58.9
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 2.0e-17 95.5 138 47.8
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 3.4e-17 94.7 144 44.4
CiPaw.09G007900 Carya illinoinensis HOM05D007410 ORTHO05D009500 1.3e-16 92.8 85 62.4
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.1e-15 89.7 91 60.4
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 1.6e-14 85.9 93 53.8
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 2.0e-14 85.5 127 44.1
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 3.5e-14 84.7 153 41.8
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 1.3e-13 82.8 92 52.2
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 2.3e-13 82.0 177 57.6
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 2.3e-13 82.0 93 57.0
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 2.9e-13 81.6 96 46.9
SHI27720 Sapria himalayana HOM05D007410 ORTHO05D009500 5.0e-13 80.9 90 52.2
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 6.6e-13 80.5 106 50.0
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 6.6e-13 80.5 101 46.5
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 6.6e-13 80.5 122 43.4
Carub.0006s1061 Capsella rubella HOM05D007410 ORTHO05D009500 8.6e-13 80.1 95 50.5
CARHR201020 Cardamine hirsuta HOM05D007410 ORTHO05D009500 1.1e-12 79.7 152 36.8
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 3.3e-12 78.2 149 38.9
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 4.3e-12 77.8 153 37.9
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 5.6e-12 77.4 99 48.5
BraA10t44635Z Brassica rapa HOM05D007410 ORTHO05D009500 9.5e-12 76.6 145 40.0
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 1.6e-11 75.9 145 37.9
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 2.8e-11 75.1 149 38.9
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 2.8e-11 75.1 91 49.5
Oeu058028.1 Olea europaea HOM05D007410 ORTHO05D009500 3.6e-11 74.7 92 48.9
BcaNung06328 Brassica carinata HOM05D007410 ORTHO05D009500 6.1e-11 73.9 156 39.1
A10p25700 Brassica napus HOM05D007410 ORTHO05D009500 6.1e-11 73.9 145 37.9
BolC9t59308H Brassica oleracea HOM05D007410 ORTHO05D009500 6.1e-11 73.9 149 38.3
Nitab4.5_0001290g0100 Nicotiana tabacum HOM05D007410 ORTHO05D009500 1.0e-10 73.2 99 47.5
DCAR_020784 Daucus carota HOM05D007410 ORTHO05D009500 1.4e-10 72.8 109 41.3
CANSAT80G0494 Cannabis sativa HOM05D007410 ORTHO05D009500 1.8e-10 72.4 99 45.5
Migut.J00989 Erythranthe guttata HOM05D007410 ORTHO05D009500 1.8e-10 72.4 93 46.2
Manes.09G058000 Manihot esculenta HOM05D007410 ORTHO05D009500 1.8e-10 72.4 101 47.5
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 1.8e-10 72.4 121 43.0
Peaxi162Scf00802g00013 Petunia axillaris HOM05D007410 ORTHO05D009500 1.8e-10 72.4 120 43.3
C09p64770 Brassica napus HOM05D007410 ORTHO05D009500 2.3e-10 72.0 145 37.2
Glyma.19G190667 Glycine max HOM05D007410 ORTHO05D009500 2.3e-10 72.0 121 41.3
Lj9E304T4 Lonicera japonica HOM05D007410 ORTHO05D009500 2.3e-10 72.0 113 43.4
Nn8g39918 Nelumbo nucifera HOM05D007410 ORTHO05D009500 3.0e-10 71.6 105 45.7
COL.COLO4_29826 Corchorus olitorius HOM05D007410 ORTHO05D009500 5.2e-10 70.9 87 50.6
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 5.2e-10 70.9 122 41.0
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 5.2e-10 70.9 95 47.4
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 1.2e-09 69.7 121 39.7
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 2.6e-09 68.6 48 62.5
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 2.6e-09 68.6 95 42.1
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 4.4e-09 67.8 128 43.0
Cpa.g.sc117.70 Carica papaya HOM05D007410 ORTHO05D009500 9.8e-09 66.6 44 63.6
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 1.7e-08 65.9 99 43.4
Lj1g0017625 Lotus japonicus HOM05D007410 ORTHO05D009500 2.2e-08 65.5 128 39.8
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 2.9e-08 65.1 128 40.6
FAN09G0790 Fragaria x ananassa HOM05D007410 ORTHO05D009500 6.4e-08 63.9 46 56.5
Sopen12g034470 Solanum pennellii HOM05D007410 ORTHO05D009500 6.4e-08 63.9 95 43.2
AUR62004183 Chenopodium quinoa HOM05D007410 ORTHO05D009500 8.3e-08 63.5 147 36.7
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 1.1e-07 63.2 88 46.6
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 4.1e-07 61.2 92 41.3
HanXRQChr17g0534281 Helianthus annuus HOM05D007410 ORTHO05D009500 4.1e-07 61.2 92 41.3
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 5.4e-07 60.8 48 54.2
Thecc.05G080100 Theobroma cacao HOM05D007410 ORTHO05D009500 5.4e-07 60.8 50 54.0
AUR62013683 Chenopodium quinoa HOM05D007410 ORTHO05D009500 1.6e-06 59.3 46 56.5
Solyc12g099840.1 Solanum lycopersicum HOM05D007410 ORTHO05D009500 1.6e-06 59.3 98 39.8
Atru.chr12.1036 Acer truncatum HOM05D007410 ORTHO05D009500 2.0e-06 58.9 35 91.4
Lj9P304T66 Lonicera japonica HOM05D007410 ORTHO05D009500 2.7e-06 58.5 48 52.1
Migut.A01169 Erythranthe guttata HOM05D007410 ORTHO05D009500 4.6e-06 57.8 44 61.4
Psat2g007640 Pisum sativum HOM05D007410 ORTHO05D009500 7.8e-06 57.0 48 52.1


User provided reference genes

Program Settings