Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.842 Acer truncatum HOM05D008181 ORTHO05D010459 1.3e-82 309.7 160 100.0
Thecc.03G161900 Theobroma cacao HOM05D008181 ORTHO05D010459 3.8e-13 79.0 120 34.2
Thecc.07G043200 Theobroma cacao HOM05D008181 ORTHO05D010459 1.2e-11 73.9 125 36.0
Thecc.02G184500 Theobroma cacao HOM05D008181 ORTHO05D010459 1.6e-11 73.6 81 45.7
Thecc.01G188500 Theobroma cacao HOM05D008181 ORTHO05D010459 3.5e-11 72.4 110 33.6
Thecc.09G121600 Theobroma cacao HOM05D008181 ORTHO05D010459 8.7e-10 67.8 95 36.8
PSO063G4195 Papaver somniferum HOM05D007816 ORTHO05D000397 2.5e-09 66.2 104 34.6
PSO339G5530 Papaver somniferum HOM05D009891 ORTHO05D009626 2.5e-09 66.2 91 38.5
Thecc.04G032800 Theobroma cacao HOM05D008181 ORTHO05D010459 4.3e-09 65.5 110 31.8
PSO339G4551 Papaver somniferum HOM05D009891 ORTHO05D009626 5.7e-09 65.1 68 45.6
PSO421G0071 Papaver somniferum HOM05D007816 ORTHO05D000397 9.7e-09 64.3 104 33.7
PSO339G4311 Papaver somniferum HOM05D009891 ORTHO05D009626 1.3e-08 63.9 117 32.5
PSO384G0927 Papaver somniferum HOM05D009891 ORTHO05D009626 3.7e-08 62.4 93 36.6
Nitab4.5_0007629g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 4.8e-08 62.0 108 37.0
CsaV3_6G042820 Cucumis sativus L. HOM05D007907 ORTHO05D009079 6.3e-08 61.6 114 31.6
Ciclev10003531m.g Citrus clementina HOM05D002262 ORTHO05D000482 8.2e-08 61.2 100 38.0
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.1e-07 60.8 105 33.3
Nitab4.5_0011961g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.4e-07 60.5 108 36.1
Sed0000312 Sechium edule HOM05D007907 ORTHO05D009079 1.4e-07 60.5 112 32.1
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.8e-07 60.1 108 33.3
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.8e-07 60.1 109 33.9
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.4e-07 59.7 112 31.2
Nitab4.5_0003869g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.1e-07 59.3 111 33.3
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.1e-07 59.3 104 31.7
Nitab4.5_0002459g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 4.1e-07 58.9 108 36.1
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.3e-07 58.5 108 32.4
Nitab4.5_0009218g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.3e-07 58.5 108 32.4
Nitab4.5_0000924g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.0e-07 57.8 109 32.1
Nitab4.5_0008423g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 9.0e-07 57.8 108 35.2
Atru.chr7.61 Acer truncatum HOM05D008181 ORTHO05D010459 1.2e-06 57.4 72 36.1
ClCG09G012000 Citrullus lanatus HOM05D012996 ORTHO05D000482 1.2e-06 57.4 68 42.6
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.2e-06 57.4 89 33.7
Nitab4.5_0001308g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.5e-06 57.0 105 33.3
Nitab4.5_0010313g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.0e-06 56.6 108 36.1
AL211U10020 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 2.6e-06 56.2 99 34.3
CANSAT54G0758 Cannabis sativa HOM05D002262 ORTHO05D000482 2.6e-06 56.2 70 35.7
Ciclev10017905m.g Citrus clementina HOM05D007816 ORTHO05D000482 2.6e-06 56.2 100 33.0
HanXRQChr04g0099521 Helianthus annuus HOM05D010915 ORTHO05D010404 2.6e-06 56.2 109 35.8
Nitab4.5_0000008g0750 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-06 56.2 74 36.5
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.4e-06 55.8 110 33.6
Nitab4.5_0005900g0130 Nicotiana tabacum HOM05D005877 ORTHO05D010356 5.9e-06 55.1 108 35.2
Nitab4.5_0006980g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.9e-06 55.1 106 31.1
BolC4t24606H Brassica oleracea HOM05D000675 ORTHO05D000395 7.7e-06 54.7 108 32.4
Nitab4.5_0002160g0110 Nicotiana tabacum HOM05D000713 ORTHO05D000482 7.7e-06 54.7 113 34.5
Nitab4.5_0004436g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 7.7e-06 54.7 108 33.3
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 7.7e-06 54.7 110 35.5
Nitab4.5_0003619g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.0e-05 54.3 70 40.0
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.0e-05 54.3 105 32.4
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 1.0e-05 54.3 110 35.5


User provided reference genes

Program Settings