Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.731 Acer truncatum HOM05D005395 ORTHO05D006352 3.6e-216 754.6 370 100.0
Ciclev10030541m.g Citrus clementina HOM05D005395 ORTHO05D006352 8.7e-146 520.8 365 69.6
MD07G1010300 Malus domestica HOM05D005395 ORTHO05D006352 3.0e-138 495.7 373 66.2
Prupe.2G012600 Prunus persica HOM05D005395 ORTHO05D006352 1.9e-137 493.0 370 65.9
Cfa008089 Carpinus fangiana HOM05D005395 ORTHO05D006352 3.8e-133 478.8 369 65.0
RcHm_v2.0_Chr1g0315901 Rosa chinensis HOM05D005395 ORTHO05D006352 2.5e-132 476.1 370 65.1
FvH4_7g01000 Fragaria vesca HOM05D005395 ORTHO05D006352 1.7e-128 463.4 369 62.6
FAN06G4072 Fragaria x ananassa HOM05D005395 ORTHO05D006352 2.8e-128 462.6 369 62.6
FAN10G2468 Fragaria x ananassa HOM05D005395 ORTHO05D006352 1.1e-127 460.7 369 62.6
FAN03G2830 Fragaria x ananassa HOM05D005395 ORTHO05D006352 2.4e-127 459.5 368 61.7
Potri.003G022600 Populus trichocarpa HOM05D005395 ORTHO05D006352 4.1e-127 458.8 369 64.2
CiPaw.13G004500 Carya illinoinensis HOM05D005395 ORTHO05D006352 5.3e-127 458.4 369 63.4
Sabra03G0014300 Salix brachista HOM05D005395 ORTHO05D006352 2.0e-126 456.4 368 63.3
TWI09G1525 Tripterygium wilfordii HOM05D005395 ORTHO05D006352 2.2e-125 453.0 367 62.4
Nn7g36191 Nelumbo nucifera HOM05D005395 ORTHO05D006352 3.8e-125 452.2 379 60.7
TAR633G2667 Trochodendron aralioides HOM05D005395 ORTHO05D006352 7.2e-124 448.0 370 62.7
Lalb_Chr13g0291151 Lupinus albus HOM05D005395 ORTHO05D006352 9.4e-124 447.6 371 62.0
Rhsim07G0055200 Rhododendron simsii HOM05D005395 ORTHO05D006352 9.4e-124 447.6 373 61.1
QL11p003492 Quercus lobata HOM05D005395 ORTHO05D006352 4.7e-123 445.3 369 61.0
CANSAT78G1614 Cannabis sativa HOM05D005395 ORTHO05D006352 5.1e-122 441.8 367 59.9
COL.COLO4_04642 Corchorus olitorius HOM05D005395 ORTHO05D006352 6.7e-122 441.4 373 60.1
Phvul.005G021500 Phaseolus vulgaris HOM05D005395 ORTHO05D006352 6.7e-122 441.4 373 61.1
QL05p060653 Quercus lobata HOM05D005395 ORTHO05D006352 5.7e-121 438.3 366 62.0
VMungo1080G1687 Vigna mungo HOM05D005395 ORTHO05D006352 9.7e-121 437.6 373 61.1
ClCG10G012430 Citrullus lanatus HOM05D005395 ORTHO05D006352 1.3e-120 437.2 367 60.2
GSVIVG01032086001 Vitis vinifera HOM05D005395 ORTHO05D006352 1.1e-119 434.1 368 59.8
Glyma.08G155900 Glycine max HOM05D005395 ORTHO05D006352 4.1e-119 432.2 355 62.8
Lj7C570T8 Lonicera japonica HOM05D005395 ORTHO05D006352 1.5e-118 430.3 367 59.9
Sed0006979 Sechium edule HOM05D005395 ORTHO05D006352 2.6e-118 429.5 373 59.8
QL02p026227 Quercus lobata HOM05D005395 ORTHO05D006352 5.9e-118 428.3 335 64.8
Glyma.15G274000 Glycine max HOM05D005395 ORTHO05D006352 1.7e-117 426.8 367 60.5
Psat5g193800 Pisum sativum HOM05D005395 ORTHO05D006352 5.0e-117 425.2 369 58.0
TPR.G30923 Trifolium pratense HOM05D005395 ORTHO05D006352 8.5e-117 424.5 366 58.5
MELO3C023972.2 Cucumis melo HOM05D005395 ORTHO05D006352 1.1e-116 424.1 373 58.4
Ca_14376_v3 Cicer arietinum L. HOM05D005395 ORTHO05D006352 1.5e-116 423.7 348 62.1
SHI19148 Sapria himalayana HOM05D005395 ORTHO05D006352 4.2e-116 422.2 371 59.6
Oeu063172.1 Olea europaea HOM05D005395 ORTHO05D006352 1.2e-115 420.6 370 58.4
Lj3g0013961 Lotus japonicus HOM05D005395 ORTHO05D006352 3.9e-114 415.6 371 58.2
PGR042G3169 Punica granatum HOM05D005395 ORTHO05D006352 8.8e-114 414.5 374 57.5
Cpa.g.sc245.16 Carica papaya HOM05D005395 ORTHO05D006352 7.4e-113 411.4 318 63.8
Gohir.D04G018600 Gossypium hirsutum HOM05D005395 ORTHO05D006352 7.4e-113 411.4 365 56.7
Hund24995 Selenicereus undatus HOM05D005395 ORTHO05D006352 2.8e-112 409.5 369 55.6
arahy.Tifrunner.gnm1.ann1.XBA78H Arachis hypogaea HOM05D005395 ORTHO05D006352 4.8e-112 408.7 370 57.6
Gohir.A05G396700 Gossypium hirsutum HOM05D005395 ORTHO05D006352 6.3e-112 408.3 365 56.7
Gorai.012G022200 Gossypium raimondii HOM05D005395 ORTHO05D006352 1.8e-111 406.8 365 56.4
SGA_v2.0_scaffold119G32730 Striga asiatica HOM05D005395 ORTHO05D006352 1.7e-109 400.2 370 55.7
AT5G16850 Arabidopsis thaliana HOM05D005395 ORTHO05D006352 2.9e-109 399.4 366 51.9
AUR62041247 Chenopodium quinoa HOM05D005395 ORTHO05D006352 6.5e-109 398.3 368 53.3
CAN.G1820.1 Capsicum annuum HOM05D005395 ORTHO05D006352 8.5e-109 397.9 370 56.2
CARHR196310 Cardamine hirsuta HOM05D005395 ORTHO05D006352 8.5e-109 397.9 368 51.1
BolC9t58856H Brassica oleracea HOM05D005395 ORTHO05D006352 1.1e-108 397.5 369 53.1
C09p60230 Brassica napus HOM05D005395 ORTHO05D006352 2.5e-108 396.4 369 53.1
Nitab4.5_0013258g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 7.2e-108 394.8 372 56.2
Nitab4.5_0000634g0140 Nicotiana tabacum HOM05D005395 ORTHO05D006352 1.2e-107 394.0 370 56.8
QL12p011919 Quercus lobata HOM05D005395 ORTHO05D006352 1.2e-107 394.0 318 61.6
Sp6g27270 Schrenkiella parvula HOM05D005395 ORTHO05D006352 2.1e-107 393.3 368 51.6
Carub.0006s1507 Capsella rubella HOM05D005395 ORTHO05D006352 1.8e-106 390.2 368 50.8
DCAR_005449 Daucus carota HOM05D005395 ORTHO05D006352 2.3e-106 389.8 363 54.0
EL10Ac1g02254 Beta vulgaris HOM05D005395 ORTHO05D006352 4.0e-106 389.0 368 53.3
A10p22380 Brassica napus HOM05D005395 ORTHO05D006352 4.0e-106 389.0 369 52.3
Thhalv10012498m.g Eutrema salsugineum HOM05D005395 ORTHO05D006352 4.0e-106 389.0 370 51.6
Aa31sc160G20 Aethionema arabicum HOM05D005395 ORTHO05D006352 1.2e-105 387.5 368 51.6
PSO339G2846 Papaver somniferum HOM05D005395 ORTHO05D006352 1.2e-105 387.5 380 53.9
BraA10t44297Z Brassica rapa HOM05D005395 ORTHO05D006352 1.5e-105 387.1 369 52.3
MBI03_g07304_MAGBIO Magnolia biondii HOM05D005395 ORTHO05D006352 1.5e-105 387.1 385 53.8
Peaxi162Scf00428g00318 Petunia axillaris HOM05D005395 ORTHO05D006352 2.8e-104 382.9 370 54.9
vmacro13663 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 2.0e-102 376.7 283 65.4
Solyc01g087095.2 Solanum lycopersicum HOM05D005395 ORTHO05D006352 2.2e-101 373.2 373 52.8
Aqoxy1G02896 Aquilegia oxysepala HOM05D005395 ORTHO05D006352 2.9e-101 372.9 364 53.6
Sopen01g034170 Solanum pennellii HOM05D005395 ORTHO05D006352 6.5e-101 371.7 373 52.8
unitig_0.g1385 Utricularia gibba HOM05D005395 ORTHO05D006352 7.2e-100 368.2 366 52.5
Manes.10G091300 Manihot esculenta HOM05D005395 ORTHO05D006352 1.8e-98 363.6 281 64.8
HanXRQChr12g0379891 Helianthus annuus HOM05D005395 ORTHO05D006352 1.3e-96 357.5 369 51.8
Migut.B01303 Erythranthe guttata HOM05D005395 ORTHO05D006352 5.9e-94 348.6 369 52.3
Migut.B01025 Erythranthe guttata HOM05D005395 ORTHO05D006352 1.0e-93 347.8 368 51.4
HPP92_011342 Vanilla planifolia HOM05D005395 ORTHO05D006352 5.6e-92 342.0 384 47.1
BcaC04g18841 Brassica carinata HOM05D005395 ORTHO05D006352 7.5e-89 331.6 370 47.6
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 1.7e-88 330.5 360 48.9
Actinidia24666 Actinidia chinensis HOM05D005395 ORTHO05D006352 8.0e-83 311.6 366 46.7
AUR62014136 Chenopodium quinoa HOM05D005395 ORTHO05D006352 1.3e-77 294.3 255 55.3
HPP92_011265 Vanilla planifolia HOM05D005395 ORTHO05D006352 8.3e-72 275.0 272 52.9
Thecc.10G136000 Theobroma cacao HOM05D005395 ORTHO05D006352 1.6e-67 260.8 207 61.8
Mapoly0009s0015 Marchantia polymorpha HOM05D005395 ORTHO05D006352 8.4e-64 248.4 424 36.3
Pp3c1_42700 Physcomitrium patens HOM05D005395 ORTHO05D006352 1.2e-62 244.6 377 37.4
AagrBONN_evm.TU.Sc2ySwM_344.2351 Anthoceros agrestis HOM05D005395 ORTHO05D006352 1.0e-61 241.5 360 37.8
arahy.Tifrunner.gnm1.ann1.LX21RY Arachis hypogaea HOM05D005395 ORTHO05D006352 1.7e-61 240.7 370 39.2
SEGI_22370 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 1.7e-61 240.7 357 38.9
SEGI_30633 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 1.7e-61 240.7 357 38.9
Nitab4.5_0002179g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 2.2e-56 223.8 188 61.7
Sc04g0005700 Simmondsia chinensis HOM05D005395 ORTHO05D006352 6.4e-48 195.7 188 53.2
Lsat_1_v5_gn_4_31580 Lactuca sativa HOM05D005395 ORTHO05D006352 1.6e-46 191.0 370 36.8
MCO03G604 Micromonas commoda HOM05D005395 ORTHO05D006352 1.9e-31 141.0 379 29.3
Cre04.g213652 Chlamydomonas reinhardtii HOM05D005395 ORTHO05D006352 1.0e-24 118.6 191 38.2
CBR_g45710 Chara braunii HOM05D005395 ORTHO05D006352 5.5e-23 112.8 158 42.4
Aa31sc690G30 Aethionema arabicum HOM05D005395 ORTHO05D006352 1.4e-15 88.2 94 47.9
CSS0040942 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 4.2e-15 86.7 82 54.9
CDE07G0311 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 2.0e-12 77.8 71 52.1
CSS0036458 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 5.7e-12 76.3 82 51.2
CSS0041236 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 5.7e-12 76.3 82 51.2
Cfa026815 Carpinus fangiana HOM05D005395 ORTHO05D006352 3.7e-11 73.6 182 28.0
CSS0042886 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 4.1e-10 70.1 82 47.6
PSO384G2197 Papaver somniferum HOM05D005395 ORTHO05D006352 9.1e-10 68.9 84 41.7
Dinv18440 Davidia involucrata HOM05D005395 ORTHO05D006352 5.5e-07 59.7 48 54.2


User provided reference genes

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