Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.70 Acer truncatum HOM05D008112 ORTHO05D010225 7.9e-48 193.7 120 100.0
Manes.14G102600 Manihot esculenta HOM05D008112 ORTHO05D010225 6.8e-15 84.3 111 43.2
CiPaw.15G085200 Carya illinoinensis HOM05D008112 ORTHO05D010225 9.8e-14 80.5 121 43.8
Manes.06G068400 Manihot esculenta HOM05D008112 ORTHO05D010225 9.8e-14 80.5 118 41.5
Prupe.1G311100 Prunus persica HOM05D008112 ORTHO05D010225 3.7e-13 78.6 100 47.0
Gorai.005G190400 Gossypium raimondii HOM05D008112 ORTHO05D010225 4.8e-13 78.2 100 47.0
Thecc.02G230800 Theobroma cacao HOM05D008112 ORTHO05D010225 6.3e-13 77.8 89 49.4
Gohir.D02G169900 Gossypium hirsutum HOM05D008112 ORTHO05D010225 8.3e-13 77.4 100 47.0
RcHm_v2.0_Chr4g0435171 Rosa chinensis HOM05D008112 ORTHO05D010225 4.1e-12 75.1 122 45.1
TAR622G0251 Trochodendron aralioides HOM05D008112 ORTHO05D010225 4.1e-12 75.1 95 44.2
Gohir.A03G146800 Gossypium hirsutum HOM05D008112 ORTHO05D010225 5.4e-12 74.7 100 47.0
Nn3g17844 Nelumbo nucifera HOM05D008112 ORTHO05D010225 7.0e-12 74.3 118 39.8
TAR371G0405 Trochodendron aralioides HOM05D008112 ORTHO05D010225 9.1e-12 73.9 113 38.9
FAN07G1645 Fragaria x ananassa HOM05D008112 ORTHO05D010225 1.2e-11 73.6 122 43.4
TPR.G1513 Trifolium pratense HOM05D008112 ORTHO05D010225 2.0e-11 72.8 100 43.0
Haze_17483 Corylus avellana HOM05D008112 ORTHO05D010225 3.5e-11 72.0 101 43.6
FAN22G0823 Fragaria x ananassa HOM05D008112 ORTHO05D010225 3.5e-11 72.0 122 43.4
FvH4_4g27360 Fragaria vesca HOM05D008112 ORTHO05D010225 5.9e-11 71.2 122 41.0
FAN12G3697 Fragaria x ananassa HOM05D008112 ORTHO05D010225 5.9e-11 71.2 122 41.0
FAN12G3827 Fragaria x ananassa HOM05D008112 ORTHO05D010225 5.9e-11 71.2 122 41.0
MELO3C012251.2 Cucumis melo HOM05D008112 ORTHO05D010225 7.7e-11 70.9 90 53.3
Medtr1g110820 Medicago truncatula HOM05D008112 ORTHO05D010225 1.0e-10 70.5 100 41.0
Glyma.20G115800 Glycine max HOM05D008112 ORTHO05D010225 2.9e-10 68.9 93 44.1
Potri.010G124900 Populus trichocarpa HOM05D008112 ORTHO05D010225 3.8e-10 68.6 104 44.2
Cfa018594 Carpinus fangiana HOM05D008112 ORTHO05D010225 6.6e-10 67.8 101 42.6
Glyma.08G262400 Glycine max HOM05D008112 ORTHO05D010225 8.6e-10 67.4 97 42.3
Glyma.10G274200 Glycine max HOM05D008112 ORTHO05D010225 1.1e-09 67.0 106 37.7
Potri.008G120800 Populus trichocarpa HOM05D008112 ORTHO05D010225 1.1e-09 67.0 111 42.3
Hma1.2p1_0061F.1_g033900 Hydrangea macrophylla HOM05D008112 ORTHO05D010225 1.5e-09 66.6 95 37.9
Lj2g0015777 Lotus japonicus HOM05D008112 ORTHO05D010225 1.5e-09 66.6 106 37.7
Phvul.003G035700 Phaseolus vulgaris HOM05D008112 ORTHO05D010225 3.3e-09 65.5 120 37.5
Rhsim12G0084800 Rhododendron simsii HOM05D008112 ORTHO05D010225 3.3e-09 65.5 104 39.4
CSS0024667 Camellia sinensis var. sinensis HOM05D008112 ORTHO05D010225 9.5e-09 63.9 100 40.0
Ciclev10017355m.g Citrus clementina HOM05D008112 ORTHO05D010225 1.2e-08 63.5 88 42.0
Sed0024639 Sechium edule HOM05D008112 ORTHO05D010225 3.6e-08 62.0 106 38.7
TAR629G1885 Trochodendron aralioides HOM05D008112 ORTHO05D010225 3.6e-08 62.0 84 40.5
CiPaw.16G065000 Carya illinoinensis HOM05D008112 ORTHO05D010225 6.1e-08 61.2 101 39.6
Lalb_Chr10g0100011 Lupinus albus HOM05D008112 ORTHO05D010225 6.1e-08 61.2 103 41.7
CsaV3_5G034340 Cucumis sativus L. HOM05D008112 ORTHO05D010225 3.0e-07 58.9 86 45.3
ClCG05G022690 Citrullus lanatus HOM05D008112 ORTHO05D010225 4.0e-07 58.5 91 48.4
Lalb_Chr06g0166071 Lupinus albus HOM05D008112 ORTHO05D010225 4.0e-07 58.5 102 37.3
Lalb_Chr17g0342121 Lupinus albus HOM05D008112 ORTHO05D010225 8.9e-07 57.4 39 69.2
Lalb_Chr02g0145981 Lupinus albus HOM05D008112 ORTHO05D010225 2.0e-06 56.2 105 39.0
Cpa.g.sc1.41 Carica papaya HOM05D008112 ORTHO05D010225 3.4e-06 55.5 96 37.5
Phvul.007G027300 Phaseolus vulgaris HOM05D008112 ORTHO05D010225 7.5e-06 54.3 43 60.5
TPR.G39819 Trifolium pratense HOM05D008112 ORTHO05D010225 9.8e-06 53.9 105 40.0


User provided reference genes

Program Settings