Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.497 Acer truncatum HOM05D005599 ORTHO05D006921 5.0e-69 264.2 126 100.0
COL.COLO4_20491 Corchorus olitorius HOM05D005599 ORTHO05D006921 4.5e-62 241.1 126 88.9
Thecc.02G282300 Theobroma cacao HOM05D005599 ORTHO05D006921 1.3e-61 239.6 126 88.9
Duzib251G0393 Durio zibethinus HOM05D005599 ORTHO05D006921 6.6e-61 237.3 126 87.3
CiPaw.06G011400 Carya illinoinensis HOM05D005599 ORTHO05D006921 2.5e-60 235.3 120 90.0
Ciclev10017195m.g Citrus clementina HOM05D005599 ORTHO05D006921 1.6e-59 232.6 120 90.0
Manes.15G128100 Manihot esculenta HOM05D005599 ORTHO05D006921 2.1e-59 232.3 120 89.2
FAN05G3069 Fragaria x ananassa HOM05D005599 ORTHO05D006921 3.6e-59 231.5 120 88.3
FAN12G4015 Fragaria x ananassa HOM05D005599 ORTHO05D006921 3.6e-59 231.5 120 88.3
FAN25G3147 Fragaria x ananassa HOM05D005599 ORTHO05D006921 3.6e-59 231.5 120 88.3
RcHm_v2.0_Chr4g0425701 Rosa chinensis HOM05D005599 ORTHO05D006921 3.6e-59 231.5 120 88.3
Gohir.A03G120800 Gossypium hirsutum HOM05D005599 ORTHO05D006921 6.1e-59 230.7 126 84.9
Gohir.D02G144100 Gossypium hirsutum HOM05D005599 ORTHO05D006921 1.8e-58 229.2 126 84.1
FAN07G1516 Fragaria x ananassa HOM05D005599 ORTHO05D006921 2.3e-58 228.8 120 87.5
TWI79G1349 Tripterygium wilfordii HOM05D005599 ORTHO05D006921 2.3e-58 228.8 120 89.2
Potri.008G129900 Populus trichocarpa HOM05D005599 ORTHO05D006921 4.0e-58 228.0 120 87.5
QL01p001565 Quercus lobata HOM05D005599 ORTHO05D006921 4.0e-58 228.0 119 87.4
Prupe.1G325600 Prunus persica HOM05D005599 ORTHO05D006921 5.2e-58 227.6 120 86.7
FvH4_4g19980 Fragaria vesca HOM05D005599 ORTHO05D006921 1.2e-57 226.5 120 88.3
Hund09673 Selenicereus undatus HOM05D005599 ORTHO05D006921 2.0e-57 225.7 119 87.4
Sc14g0007100 Simmondsia chinensis HOM05D005599 ORTHO05D006921 2.6e-57 225.3 120 86.7
GSVIVG01011752001 Vitis vinifera HOM05D005599 ORTHO05D006921 2.6e-57 225.3 120 85.0
ClCG07G006660 Citrullus lanatus HOM05D005599 ORTHO05D006921 3.4e-57 224.9 120 87.5
Potri.010G112300 Populus trichocarpa HOM05D005599 ORTHO05D006921 4.4e-57 224.6 120 87.5
Sed0017153 Sechium edule HOM05D005599 ORTHO05D006921 1.7e-56 222.6 120 84.2
CsaV3_5G013870 Cucumis sativus L. HOM05D005599 ORTHO05D006921 2.2e-56 222.2 120 85.8
EL10Ac9g21851 Beta vulgaris HOM05D005599 ORTHO05D006921 2.9e-56 221.9 120 85.0
MD16G1027400 Malus domestica HOM05D005599 ORTHO05D006921 2.9e-56 221.9 120 85.0
MD13G1024900 Malus domestica HOM05D005599 ORTHO05D006921 4.9e-56 221.1 120 84.2
AUR62032768 Chenopodium quinoa HOM05D005599 ORTHO05D006921 6.4e-56 220.7 120 84.2
Cc11_g08600 Coffea canephora HOM05D005599 ORTHO05D006921 2.4e-55 218.8 120 82.5
Aa31LG2G8490 Aethionema arabicum HOM05D005599 ORTHO05D006921 4.1e-55 218.0 115 87.0
Dinv14427 Davidia involucrata HOM05D005599 ORTHO05D006921 4.1e-55 218.0 121 85.1
RcHm_v2.0_Chr4g0441361 Rosa chinensis HOM05D005599 ORTHO05D006921 4.1e-55 218.0 128 80.5
Cfa008617 Carpinus fangiana HOM05D005599 ORTHO05D006921 5.4e-55 217.6 120 80.8
Lj6g0000510 Lotus japonicus HOM05D005599 ORTHO05D006921 5.4e-55 217.6 126 81.7
Rhsim09G0066400 Rhododendron simsii HOM05D005599 ORTHO05D006921 5.4e-55 217.6 120 84.2
MELO3C018308.2 Cucumis melo HOM05D005599 ORTHO05D006921 9.2e-55 216.9 120 84.2
Glyma.16G057902 Glycine max HOM05D005599 ORTHO05D006921 9.2e-55 216.9 120 81.7
CAN.G1244.3 Capsicum annuum HOM05D005599 ORTHO05D006921 1.2e-54 216.5 124 78.2
Glyma.19G089600 Glycine max HOM05D005599 ORTHO05D006921 1.6e-54 216.1 120 81.7
Phvul.001G094900 Phaseolus vulgaris HOM05D005599 ORTHO05D006921 1.6e-54 216.1 120 80.8
Nitab4.5_0000426g0280 Nicotiana tabacum HOM05D005599 ORTHO05D006921 2.0e-54 215.7 124 78.2
Nitab4.5_0004230g0050 Nicotiana tabacum HOM05D005599 ORTHO05D006921 2.0e-54 215.7 124 78.2
PGSC0003DMG400005984 Solanum tuberosum HOM05D005599 ORTHO05D006921 3.5e-54 214.9 124 79.8
Ah.04g163140 Amaranthus hybridus HOM05D005599 ORTHO05D006921 4.6e-54 214.5 120 81.7
TAR622G1178 Trochodendron aralioides HOM05D005599 ORTHO05D006921 4.6e-54 214.5 126 79.4
ATR0796G095 Amborella trichopoda HOM05D005599 ORTHO05D006921 1.3e-53 213.0 120 84.2
Eucgr.B01298 Eucalyptus grandis HOM05D005599 ORTHO05D006921 1.3e-53 213.0 120 81.7
PSO170G3715 Papaver somniferum HOM05D005599 ORTHO05D006921 1.3e-53 213.0 121 81.8
PGR004G1422 Punica granatum HOM05D005599 ORTHO05D006921 1.3e-53 213.0 120 80.0
Solyc04g007700.3 Solanum lycopersicum HOM05D005599 ORTHO05D006921 1.3e-53 213.0 124 79.0
THA.LOC104823847 Tarenaya hassleriana HOM05D005599 ORTHO05D006921 1.3e-53 213.0 120 81.7
MBI16_g23758_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 2.3e-53 212.2 124 78.2
Peaxi162Scf00253g01125 Petunia axillaris HOM05D005599 ORTHO05D006921 2.3e-53 212.2 119 79.8
Hma1.2p1_0096F.1_g047800 Hydrangea macrophylla HOM05D005599 ORTHO05D006921 2.9e-53 211.8 120 81.7
Ca_21512_v3 Cicer arietinum L. HOM05D005599 ORTHO05D006921 3.9e-53 211.5 120 80.0
DCAR_023596 Daucus carota HOM05D005599 ORTHO05D006921 5.0e-53 211.1 119 79.8
Lalb_Chr08g0237401 Lupinus albus HOM05D005599 ORTHO05D006921 6.6e-53 210.7 120 79.2
Sopen04g002790 Solanum pennellii HOM05D005599 ORTHO05D006921 6.6e-53 210.7 124 78.2
Carub.0001s1476 Capsella rubella HOM05D005599 ORTHO05D006921 8.6e-53 210.3 115 82.6
Sp1g13380 Schrenkiella parvula HOM05D005599 ORTHO05D006921 8.6e-53 210.3 121 78.5
AL1G27050 Arabidopsis lyrata HOM05D005599 ORTHO05D006921 1.1e-52 209.9 115 80.9
VMungo0464G0261 Vigna mungo HOM05D005599 ORTHO05D006921 1.1e-52 209.9 120 79.2
AT1G14990 Arabidopsis thaliana HOM05D005599 ORTHO05D006921 3.3e-52 208.4 115 79.1
vmacro14440 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 3.3e-52 208.4 120 79.2
TPR.G19139 Trifolium pratense HOM05D005599 ORTHO05D006921 7.3e-52 207.2 120 79.2
A09p61660 Brassica napus HOM05D005599 ORTHO05D006921 9.5e-52 206.8 115 79.1
CARHR015530 Cardamine hirsuta HOM05D005599 ORTHO05D006921 9.5e-52 206.8 115 78.3
Lsat_1_v5_gn_9_79661 Lactuca sativa HOM05D005599 ORTHO05D006921 2.8e-51 205.3 120 80.0
Cpa.g.sc65.146 Carica papaya HOM05D005599 ORTHO05D006921 4.7e-51 204.5 103 90.3
Medtr1g069405 Medicago truncatula HOM05D005599 ORTHO05D006921 6.2e-51 204.1 120 77.5
CDE07G0704 Ceratophyllum demersum HOM05D005599 ORTHO05D006921 8.0e-51 203.8 119 78.2
Os01g0606050 Oryza sativa ssp. japonica HOM05D005599 ORTHO05D006921 1.0e-50 203.4 115 80.0
SGA_v2.0_scaffold181G39695 Striga asiatica HOM05D005599 ORTHO05D006921 1.0e-50 203.4 123 73.2
Gorai.005G161400 Gossypium raimondii HOM05D005599 ORTHO05D006921 1.4e-50 203.0 109 85.3
Psat6g049960 Pisum sativum HOM05D005599 ORTHO05D006921 1.4e-50 203.0 120 78.3
A06p11010 Brassica napus HOM05D005599 ORTHO05D006921 2.3e-50 202.2 115 80.0
HanXRQChr08g0212121 Helianthus annuus HOM05D005599 ORTHO05D006921 3.1e-50 201.8 120 78.3
HPP92_003868 Vanilla planifolia HOM05D005599 ORTHO05D006921 3.1e-50 201.8 113 84.1
HPP92_003899 Vanilla planifolia HOM05D005599 ORTHO05D006921 3.1e-50 201.8 113 84.1
Aqoxy3G01068 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 4.0e-50 201.4 125 75.2
MSTRG.6631 Avicennia marina HOM05D005599 ORTHO05D006921 4.0e-50 201.4 120 76.7
BcaB02g06563 Brassica carinata HOM05D005599 ORTHO05D006921 4.0e-50 201.4 115 79.1
DCAR_026778 Daucus carota HOM05D005599 ORTHO05D006921 4.0e-50 201.4 120 75.0
SGA_v2.0_scaffold154G37132 Striga asiatica HOM05D005599 ORTHO05D006921 4.0e-50 201.4 122 73.0
BolC8t52072H Brassica oleracea HOM05D005599 ORTHO05D006921 6.8e-50 200.7 128 72.7
Zm00001eb161570 Zea mays HOM05D005599 ORTHO05D006921 6.8e-50 200.7 115 77.4
CANSAT11G1373 Cannabis sativa HOM05D005599 ORTHO05D006921 1.2e-49 199.9 126 75.4
HanXRQChr12g0364441 Helianthus annuus HOM05D005599 ORTHO05D006921 1.2e-49 199.9 120 77.5
ECA236G1659 Erigeron canadensis HOM05D005599 ORTHO05D006921 2.0e-49 199.1 120 77.5
unitig_899.g15269 Utricularia gibba HOM05D005599 ORTHO05D006921 2.0e-49 199.1 118 76.3
BolC5t30050H Brassica oleracea HOM05D005599 ORTHO05D006921 3.4e-49 198.4 120 76.7
Sabra08G0098500 Salix brachista HOM05D005599 ORTHO05D006921 3.4e-49 198.4 103 88.3
BraA09t41538Z Brassica rapa HOM05D005599 ORTHO05D006921 7.5e-49 197.2 133 69.2
Dinv07654 Davidia involucrata HOM05D005599 ORTHO05D006921 9.8e-49 196.8 105 86.7
AUR62042684 Chenopodium quinoa HOM05D005599 ORTHO05D006921 1.7e-48 196.1 106 84.0
Sabra10G0082600 Salix brachista HOM05D005599 ORTHO05D006921 2.2e-48 195.7 118 78.8
Haze_10995 Corylus avellana HOM05D005599 ORTHO05D006921 4.9e-48 194.5 110 79.1
arahy.Tifrunner.gnm1.ann1.5FG4B2 Arachis hypogaea HOM05D005599 ORTHO05D006921 2.4e-47 192.2 103 82.5
arahy.Tifrunner.gnm1.ann1.UU8CC3 Arachis hypogaea HOM05D005599 ORTHO05D006921 2.4e-47 192.2 103 82.5
arahy.Tifrunner.gnm1.ann1.5G098T Arachis hypogaea HOM05D005599 ORTHO05D006921 3.2e-47 191.8 103 82.5
CSS0001207 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 3.2e-47 191.8 103 83.5
CSS0007655 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 9.2e-47 190.3 103 85.4
CSS0037826 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 9.2e-47 190.3 103 85.4
Oeu045860.1 Olea europaea HOM05D005599 ORTHO05D006921 1.2e-46 189.9 103 82.5
Oeu003383.1 Olea europaea HOM05D005599 ORTHO05D006921 2.3e-45 185.7 107 77.6
vmacro00414 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 3.9e-45 184.9 103 82.5
C05p13060 Brassica napus HOM05D005599 ORTHO05D006921 5.0e-45 184.5 128 69.5
PSO782G0484 Papaver somniferum HOM05D005599 ORTHO05D006921 1.1e-44 183.3 106 80.2
SGA_v2.0_scaffold6G03128 Striga asiatica HOM05D005599 ORTHO05D006921 2.5e-44 182.2 119 69.7
Thhalv10009435m.g Eutrema salsugineum HOM05D005599 ORTHO05D006921 9.5e-44 180.3 98 80.6
SEGI_33740 Sequoiadendron giganteum HOM05D005599 ORTHO05D006921 2.1e-43 179.1 112 72.3
Sed0011013 Sechium edule HOM05D005599 ORTHO05D006921 6.2e-43 177.6 98 80.6
C08p45240 Brassica napus HOM05D005599 ORTHO05D006921 1.4e-42 176.4 98 78.6
Aqoxy1G03319 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 6.8e-42 174.1 109 74.3
Migut.M00054 Erythranthe guttata HOM05D005599 ORTHO05D006921 2.6e-41 172.2 119 70.6
BraA06t24281Z Brassica rapa HOM05D005599 ORTHO05D006921 3.4e-41 171.8 98 78.6
BcaC07g38244 Brassica carinata HOM05D005599 ORTHO05D006921 1.4e-39 166.4 98 76.5
C08p09930 Brassica napus HOM05D005599 ORTHO05D006921 1.4e-39 166.4 98 76.5
BolC8t48670H Brassica oleracea HOM05D005599 ORTHO05D006921 1.4e-39 166.4 98 76.5
AUR62014127 Chenopodium quinoa HOM05D005599 ORTHO05D006921 4.1e-39 164.9 86 84.9
Eucgr.E01608 Eucalyptus grandis HOM05D005599 ORTHO05D006921 9.5e-36 153.7 104 71.2
Pp3c16_10100 Physcomitrium patens HOM05D005599 ORTHO05D006921 1.2e-30 136.7 111 53.2
Eucgr.B02904 Eucalyptus grandis HOM05D005599 ORTHO05D006921 2.1e-30 136.0 92 67.4
arahy.Tifrunner.gnm1.ann1.XM49AS Arachis hypogaea HOM05D005599 ORTHO05D006921 1.3e-29 133.3 66 86.4
Mapoly0035s0140 Marchantia polymorpha HOM05D005599 ORTHO05D006921 5.6e-28 127.9 109 53.2
BcaC05g25431 Brassica carinata HOM05D005599 ORTHO05D006921 9.6e-28 127.1 120 55.0
SGA_v2.0_scaffold2G00929 Striga asiatica HOM05D005599 ORTHO05D006921 1.4e-23 113.2 65 78.5
MBI16_g23757_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 7.8e-22 107.5 71 70.4
Nn4g24251 Nelumbo nucifera HOM05D005599 ORTHO05D006921 3.0e-21 105.5 57 84.2
MBI16_g23756_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D016475 1.1e-20 103.6 71 69.0
CBR_g40805 Chara braunii HOM05D005599 ORTHO05D006921 5.4e-15 84.7 65 58.5
DCAR_032107 Daucus carota HOM05D005599 ORTHO05D006921 4.6e-14 81.6 50 68.0
SGA_v2.0_scaffold135G34854 Striga asiatica HOM05D005599 ORTHO05D006921 1.9e-12 76.3 40 77.5
QL08p008929 Quercus lobata HOM05D005599 ORTHO05D006921 1.8e-10 69.7 41 78.0
FAN02G4440 Fragaria x ananassa HOM05D012050 ORTHO05D011158 6.0e-06 54.7 26 84.6


User provided reference genes

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