Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.300 Acer truncatum HOM05D001309 ORTHO05D000385 6.6e-88 327.4 172 100.0
Atru.chr1.767 Acer truncatum HOM05D001309 ORTHO05D000385 4.9e-59 231.5 174 70.7
Atru.chr6.1726 Acer truncatum HOM05D001309 ORTHO05D000385 4.9e-59 231.5 174 70.7
Atru.chr3.658 Acer truncatum HOM05D001309 ORTHO05D000385 3.4e-44 182.2 98 93.9
Atru.chr7.472 Acer truncatum HOM05D001309 ORTHO05D000385 2.0e-28 129.8 78 83.3
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 1.7e-22 110.2 174 35.6
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.8e-22 109.4 174 35.6
TAR365G0205 Trochodendron aralioides HOM05D000141 ORTHO05D000385 2.8e-22 109.4 174 35.6
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.8e-22 109.4 174 35.6
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.1e-21 105.9 174 35.1
TAR383G0561 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.8e-19 99.0 178 34.8
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 8.5e-19 97.8 169 33.7
TAR078G0002 Trochodendron aralioides HOM05D001440 ORTHO05D000385 4.2e-18 95.5 174 33.3
TAR375G0312 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.7e-17 92.0 139 38.8
TAR624G1439 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.8e-14 82.0 145 33.1
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.4e-13 80.5 126 38.1
Atru.chr12.351 Acer truncatum HOM05D001309 ORTHO05D000385 9.1e-13 77.8 112 47.3
TAR625G0459 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.5e-12 77.0 145 31.0
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 4.5e-12 75.5 131 35.1
TAR636G2298 Trochodendron aralioides HOM05D009698 ORTHO05D000385 1.3e-11 73.9 142 33.8
TAR633G1500 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.2e-11 73.2 111 34.2
TAR628G0437 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.9e-11 72.8 99 41.4
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.5e-11 71.2 144 32.6
TAR383G0938 Trochodendron aralioides HOM05D009698 ORTHO05D000385 8.5e-11 71.2 108 36.1
TAR369G0592 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.1e-10 70.9 145 29.0
TAR626G1251 Trochodendron aralioides HOM05D009698 ORTHO05D000385 5.5e-10 68.6 142 32.4
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 9.4e-10 67.8 150 31.3
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.6e-09 67.0 134 31.3
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-09 67.0 137 32.8
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.6e-09 67.0 109 36.7
MBI06_g39196_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.1e-09 66.6 100 40.0
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.1e-09 65.1 109 38.5
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 8.0e-09 64.7 156 27.6
MBI15_g14066_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-08 63.9 96 37.5
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.8e-08 63.5 159 28.3
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 1.8e-08 63.5 157 29.9
TAR374G1072 Trochodendron aralioides HOM05D001201 ORTHO05D001100 1.8e-08 63.5 121 30.6
Dinv04435 Davidia involucrata HOM05D001309 ORTHO05D013539 2.3e-08 63.2 109 36.7
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.0e-08 62.8 144 30.6
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.9e-08 62.4 135 33.3
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 5.2e-08 62.0 149 31.5
arahy.Tifrunner.gnm1.ann1.LQJ2G8 Arachis hypogaea HOM05D010482 ORTHO05D000385 6.7e-08 61.6 170 27.1
Cpa.g.sc113.47 Carica papaya HOM05D005763 ORTHO05D005970 6.7e-08 61.6 172 27.3
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 8.8e-08 61.2 124 32.3
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.6e-07 59.7 147 30.6
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.3e-07 59.3 148 30.4
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 3.3e-07 59.3 141 34.0
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.4e-07 58.9 140 27.1
TAR625G0072 Trochodendron aralioides HOM05D009698 ORTHO05D000385 5.7e-07 58.5 124 30.6
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.7e-07 58.5 148 31.1
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.4e-07 58.2 157 29.3
MBI14_g03116_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.4e-07 58.2 100 36.0
Hund20144 Selenicereus undatus HOM05D006468 ORTHO05D006908 7.4e-07 58.2 171 28.1
MBI10_g17725_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.7e-07 57.8 91 38.5
arahy.Tifrunner.gnm1.ann1.465ER6 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.3e-06 57.4 170 25.9
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.3e-06 57.4 148 31.1
Hund18522 Selenicereus undatus HOM05D006468 ORTHO05D006908 1.7e-06 57.0 147 27.9
TAR371G1187 Trochodendron aralioides HOM05D001982 ORTHO05D003938 1.7e-06 57.0 80 36.2
TAR472G0003 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.8e-06 56.2 137 32.8
MBI02_g14797_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.7e-06 55.8 147 31.3
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 3.7e-06 55.8 133 33.8
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 6.3e-06 55.1 175 26.9
arahy.Tifrunner.gnm1.ann1.TBML09 Arachis hypogaea HOM05D010482 ORTHO05D000385 8.2e-06 54.7 109 28.4
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.2e-06 54.7 122 33.6
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 8.2e-06 54.7 155 31.6
Hund10415 Selenicereus undatus HOM05D006468 ORTHO05D006908 8.2e-06 54.7 146 27.4


User provided reference genes

Program Settings