Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 5.5e-136 487.6 248 100.0
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 6.3e-100 367.9 230 86.1
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 4.9e-60 235.3 226 59.3
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 5.4e-59 231.9 227 59.5
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 7.1e-59 231.5 228 59.6
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 9.2e-59 231.1 233 60.1
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 1.6e-58 230.3 238 57.6
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 1.3e-57 227.3 225 60.0
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 5.1e-57 225.3 222 58.6
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 6.6e-57 224.9 227 58.6
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 8.7e-57 224.6 244 56.1
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 3.3e-56 222.6 223 59.6
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 5.6e-56 221.9 222 57.2
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 1.2e-55 220.7 221 57.5
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 1.2e-55 220.7 221 57.5
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 1.1e-54 217.6 228 54.8
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.4e-54 217.2 227 57.3
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 1.8e-54 216.9 226 57.1
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 3.1e-54 216.1 228 56.1
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 1.5e-53 213.8 228 54.8
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 4.4e-53 212.2 227 55.1
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 8.4e-52 208.0 221 54.8
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 1.4e-51 207.2 226 54.4
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 1.9e-51 206.8 228 55.3
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 1.2e-50 204.1 223 51.1
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 1.6e-50 203.8 219 56.2
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 1.6e-50 203.8 229 52.8
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 2.7e-50 203.0 229 52.8
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 2.7e-50 203.0 219 56.6
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 3.5e-50 202.6 225 52.9
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 1.7e-49 200.3 218 57.3
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 3.9e-49 199.1 223 52.0
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 6.6e-49 198.4 222 52.3
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 1.1e-48 197.6 226 51.3
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 2.5e-48 196.4 224 52.7
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 3.3e-48 196.1 223 51.6
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 4.3e-48 195.7 222 54.5
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 5.6e-48 195.3 226 54.9
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 1.3e-47 194.1 226 52.2
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.1e-46 191.0 217 53.9
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 1.8e-46 190.3 228 52.6
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 1.8e-46 190.3 228 51.8
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 1.8e-46 190.3 222 49.5
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.4e-46 189.9 236 51.3
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 5.3e-46 188.7 224 52.2
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 1.2e-45 187.6 218 53.7
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 1.5e-45 187.2 227 48.5
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.6e-45 186.4 222 51.4
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 3.4e-45 186.0 221 48.9
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 4.5e-45 185.7 223 50.7
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 4.5e-45 185.7 221 50.2
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 5.8e-45 185.3 229 50.7
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 9.9e-45 184.5 226 50.9
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 1.3e-44 184.1 218 48.6
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 1.3e-44 184.1 204 56.9
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 1.3e-44 184.1 217 53.0
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 1.3e-44 184.1 180 57.8
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 4.9e-44 182.2 226 48.7
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 4.9e-44 182.2 199 54.8
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 6.4e-44 181.8 223 49.8
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 6.4e-44 181.8 232 47.8
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 8.4e-44 181.4 226 50.4
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 8.4e-44 181.4 229 52.4
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 1.1e-43 181.0 227 48.0
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 1.9e-43 180.3 217 50.7
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 1.9e-43 180.3 273 44.7
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 3.2e-43 179.5 227 47.1
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 3.2e-43 179.5 218 52.8
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 9.3e-43 177.9 227 48.5
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 2.7e-42 176.4 225 48.4
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 3.5e-42 176.0 224 49.1
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 4.6e-42 175.6 219 47.9
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 4.6e-42 175.6 231 49.4
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 7.9e-42 174.9 221 47.5
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 6.7e-41 171.8 229 49.3
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 6.7e-41 171.8 231 45.9
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 5.6e-40 168.7 224 49.6
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 2.1e-39 166.8 240 44.6
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 2.8e-39 166.4 229 47.6
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 2.8e-39 166.4 225 45.3
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 8.1e-39 164.9 227 45.4
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 4.0e-38 162.5 234 44.0
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 4.0e-38 162.5 230 44.3
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 3.4e-37 159.5 221 44.3
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 3.4e-37 159.5 231 46.8
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 4.5e-37 159.1 222 46.4
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 3.8e-36 156.0 226 48.2
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 6.4e-36 155.2 215 46.0
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 8.4e-36 154.8 227 44.9
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 8.4e-36 154.8 164 55.5
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 2.7e-34 149.8 227 43.6
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 1.3e-33 147.5 132 61.4
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 1.8e-33 147.1 230 40.4
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 6.7e-33 145.2 231 43.3
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 8.7e-33 144.8 222 42.3
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 4.3e-32 142.5 318 36.8
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 2.8e-31 139.8 228 39.9
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 5.3e-30 135.6 172 52.3
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 1.3e-28 131.0 226 38.9
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 1.3e-28 131.0 134 53.7
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 2.9e-28 129.8 239 39.7
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 8.4e-28 128.3 239 39.3
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 4.2e-27 125.9 224 37.5
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 3.0e-25 119.8 133 51.9
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 3.0e-25 119.8 231 37.7
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 1.9e-24 117.1 121 55.4
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 6.3e-23 112.1 122 54.9
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 3.2e-19 99.8 234 34.6
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 8.2e-15 85.1 54 72.2
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 8.2e-15 85.1 237 29.1
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 3.1e-14 83.2 242 29.3
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 4.2e-11 72.8 93 51.6
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 9.4e-11 71.6 104 38.5
BraA07t30840Z Brassica rapa HOM05D006456 ORTHO05D007588 4.7e-10 69.3 92 50.0
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 1.5e-08 64.3 50 62.0
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 1.7e-07 60.8 113 41.6
Actinidia31998 Actinidia chinensis HOM05D006456 ORTHO05D007588 2.8e-07 60.1 75 50.7
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 9.1e-06 55.1 76 36.8
DCAR_026623 Daucus carota HOM05D000984 ORTHO05D001096 9.1e-06 55.1 79 32.9


User provided reference genes

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