Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.2644 Acer truncatum HOM05D007026 ORTHO05D008493 1.6e-136 489.6 283 100.0
vmacro21182 Vaccinium macrocarpon HOM05D007026 ORTHO05D008493 1.1e-63 247.7 299 55.2
Ciclev10032288m.g Citrus clementina HOM05D007026 ORTHO05D008493 2.1e-62 243.4 297 55.6
Cfa010744 Carpinus fangiana HOM05D007026 ORTHO05D008493 1.3e-61 240.7 259 56.8
QL04p005492 Quercus lobata HOM05D007026 ORTHO05D008493 6.6e-61 238.4 300 55.0
TWI09G0295 Tripterygium wilfordii HOM05D007026 ORTHO05D008493 6.6e-61 238.4 178 71.3
Prupe.2G010600 Prunus persica HOM05D007026 ORTHO05D008493 8.6e-61 238.0 304 49.3
Thecc.01G412700 Theobroma cacao HOM05D007026 ORTHO05D008493 1.1e-60 237.7 248 59.3
Potri.009G063700 Populus trichocarpa HOM05D007026 ORTHO05D008493 1.5e-60 237.3 211 64.9
Rhsim01G0130400 Rhododendron simsii HOM05D007026 ORTHO05D008493 5.6e-60 235.3 180 72.2
Sabra09G0047000 Salix brachista HOM05D007026 ORTHO05D008493 9.5e-60 234.6 324 50.6
Cc02_g27730 Coffea canephora HOM05D007026 ORTHO05D008493 3.6e-59 232.6 180 68.3
Actinidia21558 Actinidia chinensis HOM05D007026 ORTHO05D008493 1.1e-58 231.1 172 73.8
CSS0028033 Camellia sinensis var. sinensis HOM05D007026 ORTHO05D008493 1.4e-58 230.7 258 56.2
MD07G1007900 Malus domestica HOM05D007026 ORTHO05D008493 2.4e-58 229.9 230 58.3
Hma1.2p1_0293F.1_g116330 Hydrangea macrophylla HOM05D007026 ORTHO05D008493 3.4e-57 226.1 298 54.0
TAR623G0027 Trochodendron aralioides HOM05D007026 ORTHO05D008493 7.6e-57 224.9 319 50.2
Manes.10G145400 Manihot esculenta HOM05D007026 ORTHO05D008493 9.9e-57 224.6 312 49.7
Haze_03229 Corylus avellana HOM05D007026 ORTHO05D008493 2.9e-56 223.0 248 57.7
Potri.001G269000 Populus trichocarpa HOM05D007026 ORTHO05D008493 3.8e-56 222.6 211 61.1
CANSAT80G1756 Cannabis sativa HOM05D007026 ORTHO05D008493 6.4e-56 221.9 282 50.7
Medtr8g036520 Medicago truncatula HOM05D007026 ORTHO05D008493 6.4e-56 221.9 177 72.3
RcHm_v2.0_Chr1g0315651 Rosa chinensis HOM05D007026 ORTHO05D008493 1.1e-55 221.1 313 51.8
TAR623G1735 Trochodendron aralioides HOM05D007026 ORTHO05D008493 1.4e-55 220.7 314 50.6
Cpa.g.sc245.8 Carica papaya HOM05D007026 ORTHO05D008493 2.4e-55 219.9 329 47.4
PGR044G0728 Punica granatum HOM05D007026 ORTHO05D008493 2.4e-55 219.9 292 51.7
CsaV3_7G031200 Cucumis sativus L. HOM05D007026 ORTHO05D008493 3.2e-55 219.5 283 49.5
Nn2g15423 Nelumbo nucifera HOM05D007026 ORTHO05D008493 5.4e-55 218.8 317 49.8
ClCG09G004280 Citrullus lanatus HOM05D007026 ORTHO05D008493 2.7e-54 216.5 292 48.6
Lalb_Chr03g0033971 Lupinus albus HOM05D007026 ORTHO05D008493 2.7e-54 216.5 224 60.7
arahy.Tifrunner.gnm1.ann1.VL74DI Arachis hypogaea HOM05D007026 ORTHO05D008493 1.0e-53 214.5 177 64.4
MSTRG.28077 Avicennia marina HOM05D007026 ORTHO05D008493 3.0e-53 213.0 255 55.7
MD02G1314200 Malus domestica HOM05D007026 ORTHO05D008493 8.7e-53 211.5 295 50.5
FAN03G2284 Fragaria x ananassa HOM05D007026 ORTHO05D008493 1.5e-52 210.7 315 49.2
MELO3C023538.2 Cucumis melo HOM05D007026 ORTHO05D008493 2.5e-52 209.9 287 49.1
Psat4g148320 Pisum sativum HOM05D007026 ORTHO05D008493 3.3e-52 209.5 287 52.6
Duzib268G1513 Durio zibethinus HOM05D007026 ORTHO05D008493 9.6e-52 208.0 241 53.5
Nitab4.5_0002881g0080 Nicotiana tabacum HOM05D007026 ORTHO05D008493 1.6e-51 207.2 276 50.0
FAN06G1399 Fragaria x ananassa HOM05D007026 ORTHO05D008493 2.8e-51 206.5 320 48.4
Gorai.004G173800 Gossypium raimondii HOM05D007026 ORTHO05D008493 2.8e-51 206.5 262 52.7
Peaxi162Scf00428g00077 Petunia axillaris HOM05D007026 ORTHO05D008493 2.8e-51 206.5 281 50.2
DCAR_029660 Daucus carota HOM05D007026 ORTHO05D008493 6.2e-51 205.3 143 73.4
Gohir.D08G166400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 6.2e-51 205.3 260 53.8
Sopen03g034460 Solanum pennellii HOM05D007026 ORTHO05D008493 6.2e-51 205.3 183 62.8
FAN10G3680 Fragaria x ananassa HOM05D007026 ORTHO05D008493 1.1e-50 204.5 314 48.7
Lj3g0000564 Lotus japonicus HOM05D007026 ORTHO05D008493 2.4e-50 203.4 284 52.1
PGSC0003DMG400024551 Solanum tuberosum HOM05D007026 ORTHO05D008493 2.4e-50 203.4 280 49.3
SGA_v2.0_scaffold4G02258 Striga asiatica HOM05D007026 ORTHO05D008493 4.0e-50 202.6 286 49.0
THA.LOC104826673 Tarenaya hassleriana HOM05D007026 ORTHO05D008493 4.0e-50 202.6 234 52.6
Migut.A00762 Erythranthe guttata HOM05D007026 ORTHO05D008493 3.4e-49 199.5 150 70.0
Sc11g0009270 Simmondsia chinensis HOM05D007026 ORTHO05D008493 9.9e-49 198.0 179 58.1
ECA248G3415 Erigeron canadensis HOM05D007026 ORTHO05D008493 1.3e-48 197.6 280 47.5
Glyma.13G204000 Glycine max HOM05D007026 ORTHO05D008493 1.7e-48 197.2 275 51.6
Carub.0003s1200 Capsella rubella HOM05D007026 ORTHO05D008493 2.9e-48 196.4 237 52.3
AL3G24320 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 3.8e-48 196.1 239 50.6
BcaC01g04025 Brassica carinata HOM05D007026 ORTHO05D008493 6.4e-48 195.3 151 68.9
C03p45790 Brassica napus HOM05D007026 ORTHO05D008493 6.4e-48 195.3 151 68.9
BolC3t16854H Brassica oleracea HOM05D007026 ORTHO05D008493 6.4e-48 195.3 151 68.9
Lsat_1_v5_gn_1_108360 Lactuca sativa HOM05D007026 ORTHO05D008493 1.1e-47 194.5 285 47.7
Solyc03g115460.3 Solanum lycopersicum HOM05D007026 ORTHO05D008493 1.1e-47 194.5 283 47.7
AT3G12650 Arabidopsis thaliana HOM05D007026 ORTHO05D008493 4.2e-47 192.6 239 50.2
HanXRQChr06g0185391 Helianthus annuus HOM05D007026 ORTHO05D008493 4.2e-47 192.6 241 47.7
A03p37740 Brassica napus HOM05D007026 ORTHO05D008493 4.6e-46 189.1 151 66.2
BraA03t12929Z Brassica rapa HOM05D007026 ORTHO05D008493 4.6e-46 189.1 151 66.2
BcaB04g18713 Brassica carinata HOM05D007026 ORTHO05D008493 7.8e-46 188.3 217 51.2
Sp3g10790 Schrenkiella parvula HOM05D007026 ORTHO05D008493 7.8e-46 188.3 153 67.3
unitig_0.g1578 Utricularia gibba HOM05D007026 ORTHO05D008493 1.0e-45 188.0 218 54.1
Migut.N01474 Erythranthe guttata HOM05D007026 ORTHO05D008493 1.7e-45 187.2 301 44.9
Lj7P569T60 Lonicera japonica HOM05D007026 ORTHO05D008493 1.7e-45 187.2 163 61.3
Aqoxy1G00217 Aquilegia oxysepala HOM05D007026 ORTHO05D008493 2.3e-45 186.8 254 47.2
CARHR087160 Cardamine hirsuta HOM05D007026 ORTHO05D008493 2.3e-45 186.8 228 50.9
VMungo1127G0427 Vigna mungo HOM05D007026 ORTHO05D008493 2.3e-45 186.8 177 56.5
Phvul.011G212500 Phaseolus vulgaris HOM05D007026 ORTHO05D008493 3.0e-45 186.4 199 55.8
Nitab4.5_0005198g0030 Nicotiana tabacum HOM05D007026 ORTHO05D008493 8.7e-45 184.9 151 65.6
PSO339G4493 Papaver somniferum HOM05D007026 ORTHO05D008493 8.7e-45 184.9 265 45.3
Thhalv10021417m.g Eutrema salsugineum HOM05D007026 ORTHO05D008493 1.9e-44 183.7 242 49.6
SHI26926 Sapria himalayana HOM05D007026 ORTHO05D008493 1.9e-44 183.7 166 63.9
COL.COLO4_23920 Corchorus olitorius HOM05D007026 ORTHO05D008493 2.5e-44 183.3 156 62.8
Dinv09365 Davidia involucrata HOM05D007026 ORTHO05D008493 3.3e-44 183.0 272 49.3
Actinidia20675 Actinidia chinensis HOM05D007026 ORTHO05D008493 9.6e-44 181.4 135 71.1
Aa31LG3G20 Aethionema arabicum HOM05D007026 ORTHO05D008493 1.3e-43 181.0 236 48.7
ATR0605G064 Amborella trichopoda HOM05D007026 ORTHO05D008493 1.8e-42 177.2 188 53.7
A05p36850 Brassica napus HOM05D007026 ORTHO05D008493 1.8e-42 177.2 278 47.5
BraA05t22486Z Brassica rapa HOM05D007026 ORTHO05D008493 4.0e-42 176.0 278 46.8
MBI01_g27619_MAGBIO Magnolia biondii HOM05D007026 ORTHO05D008493 5.3e-42 175.6 137 65.0
BcaB06g25527 Brassica carinata HOM05D007026 ORTHO05D008493 1.2e-41 174.5 243 47.7
Sed0012425 Sechium edule HOM05D007026 ORTHO05D008493 3.4e-41 172.9 281 47.3
Dinv43456 Davidia involucrata HOM05D007026 ORTHO05D008493 4.5e-41 172.6 261 47.1
FvH4_7g00860 Fragaria vesca HOM05D007026 ORTHO05D008493 3.5e-38 162.9 274 47.1
RcHm_v2.0_Chr1g0315191 Rosa chinensis HOM05D007026 ORTHO05D008493 7.9e-38 161.8 114 73.7
RcHm_v2.0_Chr1g0315371 Rosa chinensis HOM05D007026 ORTHO05D008493 2.3e-37 160.2 114 72.8
RcHm_v2.0_Chr1g0315521 Rosa chinensis HOM05D007026 ORTHO05D008493 6.7e-37 158.7 114 72.8
RcHm_v2.0_Chr1g0315011 Rosa chinensis HOM05D007026 ORTHO05D008493 2.1e-35 153.7 114 71.9
Gohir.A08G145400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 6.2e-35 152.1 216 50.0
Eucgr.J01262 Eucalyptus grandis HOM05D007026 ORTHO05D008493 4.0e-34 149.4 114 65.8
HPP92_022795 Vanilla planifolia HOM05D007026 ORTHO05D008493 3.4e-33 146.4 246 41.5
BcaC05g29251 Brassica carinata HOM05D007026 ORTHO05D008493 7.6e-33 145.2 124 63.7
EL10Ac2g04312 Beta vulgaris HOM05D007026 ORTHO05D008493 1.4e-31 141.0 206 42.2
BolC5t34196H Brassica oleracea HOM05D007026 ORTHO05D008493 7.1e-31 138.7 115 65.2
PSO384G4663 Papaver somniferum HOM05D007026 ORTHO05D008493 1.6e-30 137.5 225 43.6
Os02g0718000 Oryza sativa ssp. japonica HOM05D007026 ORTHO05D008493 3.7e-27 126.3 155 47.1
BcaB08g35591 Brassica carinata HOM05D007026 ORTHO05D008493 1.8e-26 124.0 143 54.5
Zm00001eb189290 Zea mays HOM05D007026 ORTHO05D008493 3.1e-26 123.2 180 42.2
TPR.G17515 Trifolium pratense HOM05D007026 ORTHO05D008493 5.7e-20 102.4 280 35.7
Nitab4.5_0004511g0060 Nicotiana tabacum HOM05D007026 ORTHO05D008493 1.3e-19 101.3 67 73.1
AL7G43500 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 1.2e-17 94.7 79 62.0
AUR62009374 Chenopodium quinoa HOM05D007026 ORTHO05D008493 1.5e-17 94.4 120 40.0
SMO147G0317 Selaginella moellendorffii HOM05D007026 ORTHO05D008493 5.5e-15 85.9 141 36.9
Nitab4.5_0000052g0150 Nicotiana tabacum HOM05D007026 ORTHO05D008493 9.4e-15 85.1 86 59.3
Pp3c2_10070 Physcomitrium patens HOM05D007026 ORTHO05D008493 2.7e-14 83.6 165 35.8
TPR.G28471 Trifolium pratense HOM05D007026 ORTHO05D008493 2.0e-12 77.4 116 53.4
Aqoxy1G00218 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 8.2e-11 72.0 283 28.6
C05p55310 Brassica napus HOM05D007026 ORTHO05D008493 6.9e-10 68.9 51 70.6
Mapoly0153s0019 Marchantia polymorpha HOM05D007026 ORTHO05D008493 9.1e-10 68.6 133 36.1


User provided reference genes

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